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FFCP PHASE1:Mm9::chr9:49606926..49606960,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:49606926..49606960,-
|DHSsupport=NA
|short_description=p2@Ncam1
|DPIdataset=NA
|description=CAGE_peak_2_at_Ncam1_5end
|association_with_transcript=66bp_to_ENSMUST00000114476_5end
|EntrezGene=17967
|EntrezGene=17967
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=E9Q589
|UniProt=E9Q589
|association_with_transcript=66bp_to_ENSMUST00000114476_5end
|cluster_id=chr9:49606926..49606960,-
|description=CAGE_peak_2_at_Ncam1_5end
|id=chr9:49606926..49606960,-
|ontology_enrichment_celltype=CL:0000540!3.90e-17!33;CL:0000047!3.90e-17!33;CL:0000031!3.90e-17!33;CL:0000404!3.90e-17!33;CL:0002319!3.40e-16!43;CL:0000221!4.90e-16!44;CL:0000133!4.90e-16!44;CL:0000393!4.22e-15!39;CL:0000211!4.22e-15!39;CL:0000055!6.55e-14!50;CL:0000117!1.19e-13!23;CL:0000337!1.19e-13!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.34e-18,33;CL:0000047,1.34e-18,33;CL:0000031,1.34e-18,33;CL:0000404,1.34e-18,33;CL:0002319,1.07e-16,43;CL:0000221,1.53e-16,44;CL:0000133,1.53e-16,44;CL:0000393,3.21e-15,39;CL:0000211,3.21e-15,39;CL:0000117,3.41e-15,23;CL:0000337,3.41e-15,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.83e-29!73;UBERON:0005743!6.83e-29!73;UBERON:0004121!1.84e-28!102;UBERON:0000924!1.84e-28!102;UBERON:0006601!1.84e-28!102;UBERON:0000073!1.98e-28!75;UBERON:0001016!1.98e-28!75;UBERON:0002346!4.37e-25!71;UBERON:0003075!4.37e-25!71;UBERON:0007284!4.37e-25!71;UBERON:0000033!1.20e-20!63;UBERON:0001049!2.08e-20!52;UBERON:0005068!2.08e-20!52;UBERON:0006241!2.08e-20!52;UBERON:0007135!2.08e-20!52;UBERON:0000955!6.85e-19!50;UBERON:0006238!6.85e-19!50;UBERON:0003056!9.98e-19!49;UBERON:0002616!2.84e-18!49;UBERON:0002020!7.52e-18!34;UBERON:0003080!1.23e-15!40;UBERON:0002791!2.22e-15!29;UBERON:0003528!2.22e-15!29;UBERON:0001893!2.22e-15!29;UBERON:0002780!4.53e-15!39;UBERON:0001890!4.53e-15!39;UBERON:0006240!4.53e-15!39;UBERON:0000956!8.73e-11!21;UBERON:0001869!8.73e-11!21;UBERON:0000203!8.73e-11!21;UBERON:0002619!1.17e-08!17;UBERON:0007811!1.75e-07!86;UBERON:0000468!2.19e-07!333;UBERON:0000153!5.10e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.82e-30,73;UBERON:0001016,1.47e-29,75;UBERON:0004121,3.64e-29,95;UBERON:0000924,3.64e-29,95;UBERON:0006601,3.64e-29,95;UBERON:0002346,6.06e-27,64;UBERON:0003075,6.06e-27,64;UBERON:0007284,6.06e-27,64;UBERON:0010371,7.24e-23,73;UBERON:0010314,8.57e-23,92;UBERON:0000073,5.55e-22,54;UBERON:0001049,1.88e-21,52;UBERON:0005068,1.88e-21,52;UBERON:0006241,1.88e-21,52;UBERON:0007135,1.88e-21,52;UBERON:0003056,4.12e-20,49;UBERON:0002020,6.19e-20,34;UBERON:0000955,1.28e-18,47;UBERON:0006238,1.28e-18,47;UBERON:0002616,6.06e-18,46;UBERON:0003528,3.81e-17,29;UBERON:0002791,3.81e-17,29;UBERON:0001893,3.81e-17,29;UBERON:0003080,1.24e-16,40;UBERON:0002780,5.30e-16,39;UBERON:0001890,5.30e-16,39;UBERON:0006240,5.30e-16,39;UBERON:0000956,5.79e-12,21;UBERON:0001869,5.79e-12,21;UBERON:0000203,5.79e-12,21;UBERON:0002619,1.44e-09,17
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,0.503587271902309,0.405507724878058,4.77221555620372,0.782391344348039,1.52617609466313,3.29529274101708,3.30530828426282,1.25987779462826,4.31257693094915,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,18.2084814773638,18.5146842745212,17.747279298173,2.71075625655306,0,0.449949858640699,0,0,1.19840044207362,3.07374644257244,10.9910989046986,9.58542162155004,6.73039876324422,5.99867067247988,5.52171352379034,11.1466627285608,10.7346927540425,8.27296907949019,2.20231761998777,7.2781782708557,5.83704826373725,23.3438729282443,25.7080278522771,25.0038417867245,5.862842979029,8.4414391504752,7.63991238884051,5.00868595305235,9.96601765593721,13.047961207771,0.530083353332288,1.66257432234928,0,0,0,0,0,0,0.702222100658759,1.02258193546835,0,0.35333957451034,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.890652834388949,2.94925055502431,1.82679286987285,2.07553947530453,2.41156224884196,3.99801604261396,0.251333182659351,0.494389935468748,2.02439099687876,0,3.72063754879041,0.662524555381181,1.45462575940567,1.86391761218122,5.27005434620785,7.33063473847093,0,0,0,0,7.78911324905078,4.57500602818627,15.4554853098823,6.43149984711423,6.13717097592793,4.98691306942944,7.13861557498134,2.03678727700633,1.49288364732112,1.0108910337347,1.05220927943237,1.17108398666433,4.82794419310293,8.64298223065676,5.12396380641431,16.9410882886806,12.6832583082001,7.77724313845749,4.65666067330228,0.646703978798527,0.567318240503458,2.11141348996739,1.09597866213787,0.834141747676794,3.1342694986995,0.411564272815887,0.796137067273973,0,0,0.284163499395593,1.44988040774851,1.87620847984877,1.80062061461015,2.3674473558521,2.95146347621106,4.47374627373397,3.0229412817553,5.36546802799238,7.58974725386602,2.46839774870221,0.656669856316381,0.648550476366846,0.146199987425332,0.439100230582101,0,6.72927835405207,31.0771929385439,0,0.528901133327089,2.55945900642281,2.55460339046482,1.54640953586512,0.605050573870028,1.11189021922435,0.951128130562796,0.474529061544512,0.658795818896044,1.25667604400135,0.994782360205754,1.55971269695296,0,0.216138049874694,0.199141273254367,3.03468641524931,4.79843752960861,5.63538678365402,2.44381593414377,1.74557238450863,3.36651935473529,3.41477300470989,0.442830443938806,0.627994911365499,0.246794327843601,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,7.70642831941401,8.32202974804643,2.29508923527346,2.01976741763498,4.41711507182759,7.02789739733949,9.47862950024315,6.69112634267146,6.90675889655422,6.22768367735431,4.85772842009873,5.26060544240361,8.30104333687699,8.35435422696698,0.709700426041343,0.534196811001766,2.11753047159649,0.824850614862677,0,0.485561272309963,0,0.188605079755898,1.18120757152309,0.307435147943927,0,0,0.356497378384721,0,0,0,1.70219802876894,1.08036656418786,0.646793418913773,0.428674070063185,1.59606210278046,2.67553226403106,3.78462747384878,3.34911444026059,0.938686832254841,0.42366414172764,0,0.32977250588296,1.61464426695906,1.80938774784468,2.14870219205646,0.492422699235184,0.582961673259701,7.78786268444141,0,1.03193433981611,0.555583582109135,0,0.136694227721025,0,0,0,0,0,1.26534397432454,2.03319467126849,1.94409613479242,2.09088296014469,1.52853794622324,1.75323650300267,1.48776220305605,0.523511883968059,0,0,0,1.64468200648377,1.82004339502807,1.16670713006429,1.6790777052105,0.844780627453891,1.29092962510329,0.5208175393758,0,0,0.864090018773596,0,0,0.102710957164827,0,0,0.198681354781265,0.360586348559907,0,0,0.15241361331,0,0,0,0,1.58711268530648,0,0.0897138566094757,0,0.386379188064381,5.44279178808428,0.549454872801795,0.643105137237198,1.00314420807073,6.21227026878773,16.5717085142584,10.3121192419091,17.1853182343688,3.42541259885321,6.7985450765073,8.10027000278167,4.95353323546643,6.79713613476307,2.07104124700728,0.830298780673413,1.59609949360412,3.41467211508268,3.8897074730927,2.51535795153579,1.65459157605013,5.33392146723877,5.15087643097235,3.53011130550997,4.80124702351215,6.08350319736575,2.64076877940507,5.43120743325318,6.08238947846258,6.08815970929501,2.38146845641537,5.09891034157364,5.78727661391115,4.12085900803307,3.82717192349433,4.4573002810104,2.8396128985494,4.05341522910446,2.76158191601424,3.67026583619789,4.23073039458383,3.29270351170991,2.89376682581627,5.97538100921792,3.92799590160417,4.1522256343461,5.41774653065599,2.86461730218783,3.56354734727722,4.05103883060397,8.24374907195222,3.27504251823572,5.37177635120746,7.26895661861605,3.52946270591225,2.08681052058379
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,0.503587271902309,0.405507724878058,4.77221555620372,0.782391344348039,1.52617609466313,3.29529274101708,3.30530828426282,1.25987779462826,4.31257693094915,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,18.2084814773638,18.5146842745212,17.747279298173,2.71075625655306,0,0.449949858640699,0,0,1.19840044207362,3.07374644257244,10.9910989046986,9.58542162155004,6.73039876324422,5.99867067247988,5.52171352379034,11.1466627285608,10.7346927540425,8.27296907949019,2.20231761998777,7.2781782708557,5.83704826373725,23.3438729282443,25.7080278522771,25.0038417867245,5.862842979029,8.4414391504752,7.63991238884051,5.00868595305235,9.96601765593721,13.047961207771,0.530083353332288,1.66257432234928,0,0,0,0,0,0,0.702222100658759,1.02258193546835,0,0.35333957451034,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.890652834388949,2.94925055502431,1.82679286987285,2.07553947530453,2.41156224884196,3.99801604261396,0.251333182659351,0.494389935468748,2.02439099687876,0,3.72063754879041,0.662524555381181,1.45462575940567,1.86391761218122,5.27005434620785,7.33063473847093,0,0,0,0,7.78911324905078,4.57500602818627,15.4554853098823,6.43149984711423,6.13717097592793,4.98691306942944,7.13861557498134,2.03678727700633,1.49288364732112,1.0108910337347,1.05220927943237,1.17108398666433,4.82794419310293,8.64298223065676,5.12396380641431,16.9410882886806,12.6832583082001,7.77724313845749,4.65666067330228,0.646703978798527,0.567318240503458,2.11141348996739,1.09597866213787,0.834141747676794,3.1342694986995,0.411564272815887,0.796137067273973,0,0,0.284163499395593,1.44988040774851,1.87620847984877,1.80062061461015,2.3674473558521,2.95146347621106,4.47374627373397,3.0229412817553,5.36546802799238,7.58974725386602,2.46839774870221,0.656669856316381,0.648550476366846,0.146199987425332,0.439100230582101,0,6.72927835405207,31.0771929385439,0,0.528901133327089,2.55945900642281,2.55460339046482,1.54640953586512,0.605050573870028,1.11189021922435,0.951128130562796,0.474529061544512,0.658795818896044,1.25667604400135,0.994782360205754,1.55971269695296,0,0.216138049874694,0.199141273254367,3.03468641524931,4.79843752960861,5.63538678365402,2.44381593414377,1.74557238450863,3.36651935473529,3.41477300470989,0.442830443938806,0.627994911365499,0.246794327843601,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,7.70642831941401,8.32202974804643,2.29508923527346,2.01976741763498,4.41711507182759,7.02789739733949,9.47862950024315,6.69112634267146,6.90675889655422,6.22768367735431,4.85772842009873,5.26060544240361,8.30104333687699,8.35435422696698,0.709700426041343,0.534196811001766,2.11753047159649,0.824850614862677,0,0.485561272309963,0,0.188605079755898,1.18120757152309,0.307435147943927,0,0,0.356497378384721,0,0,0,1.70219802876894,1.08036656418786,0.646793418913773,0.428674070063185,1.59606210278046,2.67553226403106,3.78462747384878,3.34911444026059,0.938686832254841,0.42366414172764,0,0.32977250588296,1.61464426695906,1.80938774784468,2.14870219205646,0.492422699235184,0.582961673259701,7.78786268444141,0,1.03193433981611,0.555583582109135,0,0.136694227721025,0,0,0,0,0,1.26534397432454,2.03319467126849,1.94409613479242,2.09088296014469,1.52853794622324,1.75323650300267,1.48776220305605,0.523511883968059,0,0,0,1.64468200648377,1.82004339502807,1.16670713006429,1.6790777052105,0.844780627453891,1.29092962510329,0.5208175393758,0,0,0.864090018773596,0,0,0.102710957164827,0,0,0.198681354781265,0.360586348559907,0,0,0.15241361331,0,0,0,0,1.58711268530648,0,0.0897138566094757,0,0.386379188064381,5.44279178808428,0.549454872801795,0.643105137237198,1.00314420807073,6.21227026878773,16.5717085142584,10.3121192419091,17.1853182343688,3.42541259885321,6.7985450765073,8.10027000278167,4.95353323546643,6.79713613476307,2.07104124700728,0.830298780673413,1.59609949360412,3.41467211508268,3.8897074730927,2.51535795153579,1.65459157605013,5.33392146723877,5.15087643097235,3.53011130550997,4.80124702351215,6.08350319736575,2.64076877940507,5.43120743325318,6.08238947846258,6.08815970929501,2.38146845641537,5.09891034157364,5.78727661391115,4.12085900803307,3.82717192349433,4.4573002810104,2.8396128985494,4.05341522910446,2.76158191601424,3.67026583619789,4.23073039458383,3.29270351170991,2.89376682581627,5.97538100921792,3.92799590160417,4.1522256343461,5.41774653065599,2.86461730218783,3.56354734727722,4.05103883060397,8.24374907195222,3.27504251823572,5.37177635120746,7.26895661861605,3.52946270591225,2.08681052058379
|short_description=p2@Ncam1
}}
}}

Latest revision as of 19:17, 26 September 2015

Short description:p2@Ncam1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ncam1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 66bp_to_ENSMUST00000114476_5end
EntrezGene:Ncam1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ncam1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C318.21
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C616.94
eyeball, neonate N01.CNhs11140.1532-43E712.68
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G131.08
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F84.80
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.34e-1833
neuronal stem cell1.34e-1833
neuroblast1.34e-1833
electrically signaling cell1.34e-1833
neural cell1.07e-1643
ectodermal cell1.53e-1644
neurectodermal cell1.53e-1644
electrically responsive cell3.21e-1539
electrically active cell3.21e-1539
CNS neuron (sensu Vertebrata)3.41e-1523
neuroblast (sensu Vertebrata)3.41e-1523

Uber anatomy
Ontology termp-valuen
central nervous system1.82e-3073
nervous system1.47e-2975
ectoderm-derived structure3.64e-2995
ectoderm3.64e-2995
presumptive ectoderm3.64e-2995
neurectoderm6.06e-2764
neural plate6.06e-2764
presumptive neural plate6.06e-2764
ecto-epithelium7.24e-2373
structure with developmental contribution from neural crest8.57e-2392
regional part of nervous system5.55e-2254
neural tube1.88e-2152
neural rod1.88e-2152
future spinal cord1.88e-2152
neural keel1.88e-2152
pre-chordal neural plate4.12e-2049
gray matter6.19e-2034
brain1.28e-1847
future brain1.28e-1847
regional part of brain6.06e-1846
brain grey matter3.81e-1729
regional part of telencephalon3.81e-1729
telencephalon3.81e-1729
anterior neural tube1.24e-1640
regional part of forebrain5.30e-1639
forebrain5.30e-1639
future forebrain5.30e-1639
cerebral cortex5.79e-1221
cerebral hemisphere5.79e-1221
pallium5.79e-1221
regional part of cerebral cortex1.44e-0917
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