Personal tools

FFCP PHASE1:Mm9::chr9:62257059..62257102,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:62257059..62257102,+ |short_description=p@chr9:62257059..62257102,+ |description=CAGE_peak_at_chr9:62257059..62257102,+ |association_with_transcript=NA |E...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:62257059..62257102,+
|DHSsupport=NA
|short_description=p@chr9:62257059..62257102,+
|DPIdataset=NA
|description=CAGE_peak_at_chr9:62257059..62257102,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=484
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr9:62257059..62257102,+
|description=CAGE_peak_at_chr9:62257059..62257102,+
|id=chr9:62257059..62257102,+
|ontology_enrichment_celltype=CL:0000063!2.65e-10!66;CL:0000988!5.05e-09!32;CL:0002032!5.05e-09!32;CL:0000037!5.05e-09!32;CL:0000566!5.05e-09!32;CL:0000837!5.05e-09!32;CL:0000144!7.80e-09!121;CL:0000012!7.80e-09!121;CL:0002371!7.03e-08!118;CL:0000838!9.69e-08!12;CL:0002031!2.87e-07!25;CL:0000738!3.80e-07!17;CL:0002087!3.80e-07!17;CL:0000084!4.70e-07!11;CL:0000827!4.70e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000988,9.89e-20,32;CL:0002032,9.89e-20,32;CL:0000037,9.89e-20,32;CL:0000837,9.89e-20,32;CL:0002320,9.25e-17,46;CL:0000134,9.25e-17,46;CL:0002031,5.66e-16,25;CL:0000219,1.04e-15,54;CL:0000838,9.69e-14,12;CL:0000738,3.28e-13,17;CL:0002087,3.28e-13,17;CL:0000791,1.55e-12,9;CL:0000789,1.55e-12,9;CL:0002420,1.55e-12,9;CL:0002419,1.55e-12,9;CL:0000790,1.55e-12,9;CL:0000542,1.85e-12,13;CL:0000051,1.85e-12,13;CL:0000084,2.85e-12,11;CL:0000827,2.85e-12,11;CL:0000034,3.13e-11,97;CL:0000624,3.39e-11,8;CL:0000893,5.36e-09,6;CL:0002489,5.36e-09,6;CL:0000898,5.36e-09,6;CL:0000809,5.36e-09,6;CL:0000810,5.36e-09,6;CL:0000895,5.36e-09,6;CL:0000808,5.36e-09,6;CL:0000894,5.36e-09,6;CL:0000806,5.36e-09,6;CL:0000807,5.36e-09,6;CL:0000805,5.36e-09,6;CL:0002425,5.36e-09,6;CL:0002436,5.36e-09,6;CL:0002427,5.36e-09,6;CL:0002428,5.36e-09,6;CL:0002429,5.36e-09,6;CL:0002433,5.36e-09,6;CL:0002431,5.36e-09,6;CL:0002432,5.36e-09,6;CL:0000049,6.14e-09,19;CL:0000239,7.46e-09,6;CL:0000677,7.46e-09,6;CL:0000584,7.46e-09,6;CL:0000066,5.26e-08,25;CL:0002076,8.16e-08,15;CL:0000723,1.02e-07,91;CL:0000048,1.02e-07,91;CL:0000075,1.89e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.08e-08!15;UBERON:0001242!2.72e-07!13;UBERON:0000060!2.72e-07!13;UBERON:0001262!2.72e-07!13;UBERON:0004786!2.72e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.25e-17,46;UBERON:0000344,1.65e-10,15;UBERON:0001242,7.16e-08,13;UBERON:0001262,7.16e-08,13;UBERON:0004786,7.16e-08,13
|phase1_expression=0.160148847104794,3.83872948403297,7.27998783023258,6.95667686005709,5.50985302940982,1.34303417529512,5.37309073369709,2.58246646883153,9.15126693985834,7.2560003159818,7.0199366972457,2.6324812468461,4.62241970814255,2.71003247498892,0,3.84703008040669,1.39912375625629,6.94016763788123,5.07323404341233,3.81950686618227,0.425216450755349,0.297872853602656,4.4403964153619,11.8394392867121,10.782236210157,3.44539178469012,3.4460959692726,3.23206849028834,13.8717096203153,1.76421090831952,3.10422714917427,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,4.60384793810598,7.813353445238,9.94695113550217,7.05877785637217,6.83045484958446,14.5653105909346,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,9.56360854529097,5.07753499407941,5.71359458542189,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,0.285650984403804,0,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.768032666281217,0,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,4.69502398665741,2.64500460373749,2.31891590961342,1.72084775396277,0,0,0,0,0.140444420131752,0,2.85764605063156,2.82671659608272,0.14084341977668,0,2.54805239706646,0,3.46385665617943,3.29367825117628,2.52762222507392,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,2.87556298814209,2.39961092397363,3.17675567682662,0,0.457500602818626,0.125654352112864,0.347648640384553,0,0.41557608911912,0,0.407357455401265,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,4.21327912387941,7.46308930632674,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,0.630869845692382,0.308713837137853,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0.898819408654221,1.08069024937347,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.327726629431476,0.345369963731791,0.433947175744535,10.5553898757491,20.1245103012923,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0.504941854408746,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0,0.493647061806363,0,0,1.69465656691056,0,0.49465875882444,0,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,2.54967644990783,1.6794174278839,1.93479963326193,0,0,0.406638934253697,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,0.648074866458964,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0.233753804363138,0.226730383615211,2.66383144048878,3.22969883794113,5.54019234001459,0,0.375364950902364,0,0.643105137237198,0,1.12950368523413,0.920650473014354,0,1.54667864109319,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421
|phase1_expression=0.160148847104794,3.83872948403297,7.27998783023258,6.95667686005709,5.50985302940982,1.34303417529512,5.37309073369709,2.58246646883153,9.15126693985834,7.2560003159818,7.0199366972457,2.6324812468461,4.62241970814255,2.71003247498892,0,3.84703008040669,1.39912375625629,6.94016763788123,5.07323404341233,3.81950686618227,0.425216450755349,0.297872853602656,4.4403964153619,11.8394392867121,10.782236210157,3.44539178469012,3.4460959692726,3.23206849028834,13.8717096203153,1.76421090831952,3.10422714917427,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,4.60384793810598,7.813353445238,9.94695113550217,7.05877785637217,6.83045484958446,14.5653105909346,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,9.56360854529097,5.07753499407941,5.71359458542189,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,0.285650984403804,0,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.768032666281217,0,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,4.69502398665741,2.64500460373749,2.31891590961342,1.72084775396277,0,0,0,0,0.140444420131752,0,2.85764605063156,2.82671659608272,0.14084341977668,0,2.54805239706646,0,3.46385665617943,3.29367825117628,2.52762222507392,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,2.87556298814209,2.39961092397363,3.17675567682662,0,0.457500602818626,0.125654352112864,0.347648640384553,0,0.41557608911912,0,0.407357455401265,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,4.21327912387941,7.46308930632674,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,0.630869845692382,0.308713837137853,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0.898819408654221,1.08069024937347,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.327726629431476,0.345369963731791,0.433947175744535,10.5553898757491,20.1245103012923,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0.504941854408746,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0,0.493647061806363,0,0,1.69465656691056,0,0.49465875882444,0,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,2.54967644990783,1.6794174278839,1.93479963326193,0,0,0.406638934253697,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,0.648074866458964,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0.233753804363138,0.226730383615211,2.66383144048878,3.22969883794113,5.54019234001459,0,0.375364950902364,0,0.643105137237198,0,1.12950368523413,0.920650473014354,0,1.54667864109319,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421
|short_description=p@chr9:62257059..62257102,+
}}
}}

Latest revision as of 11:00, 5 August 2015

Short description:p@chr9:62257059..62257102, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:62257059..62257102, +
Coexpression cluster:MCL_coexpression_mm9:484
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:62257059..62257102+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.15
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B913.87
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A120.12
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell9.89e-2032
hematopoietic oligopotent progenitor cell9.89e-2032
hematopoietic stem cell9.89e-2032
hematopoietic multipotent progenitor cell9.89e-2032
connective tissue cell9.25e-1746
mesenchymal cell9.25e-1746
hematopoietic lineage restricted progenitor cell5.66e-1625
motile cell1.04e-1554
lymphoid lineage restricted progenitor cell9.69e-1412
leukocyte3.28e-1317
nongranular leukocyte3.28e-1317
mature alpha-beta T cell1.55e-129
alpha-beta T cell1.55e-129
immature T cell1.55e-129
mature T cell1.55e-129
immature alpha-beta T cell1.55e-129
lymphocyte1.85e-1213
common lymphoid progenitor1.85e-1213
T cell2.85e-1211
pro-T cell2.85e-1211
stem cell3.13e-1197
CD4-positive, alpha-beta T cell3.39e-118
thymocyte5.36e-096
double negative thymocyte5.36e-096
naive T cell5.36e-096
double-positive, alpha-beta thymocyte5.36e-096
CD4-positive, alpha-beta thymocyte5.36e-096
naive thymus-derived CD4-positive, alpha-beta T cell5.36e-096
DN4 thymocyte5.36e-096
DN1 thymic pro-T cell5.36e-096
DN2 thymocyte5.36e-096
DN3 thymocyte5.36e-096
immature single positive thymocyte5.36e-096
early T lineage precursor5.36e-096
mature CD4 single-positive thymocyte5.36e-096
resting double-positive thymocyte5.36e-096
double-positive blast5.36e-096
CD69-positive double-positive thymocyte5.36e-096
CD69-positive, CD4-positive single-positive thymocyte5.36e-096
CD4-positive, CD8-intermediate double-positive thymocyte5.36e-096
CD24-positive, CD4 single-positive thymocyte5.36e-096
common myeloid progenitor6.14e-0919
brush border epithelial cell7.46e-096
gut absorptive cell7.46e-096
enterocyte7.46e-096
epithelial cell5.26e-0825
endo-epithelial cell8.16e-0815
somatic stem cell1.02e-0791
multi fate stem cell1.02e-0791
columnar/cuboidal epithelial cell1.89e-077

Uber anatomy
Ontology termp-valuen
connective tissue9.25e-1746
mucosa1.65e-1015
intestinal mucosa7.16e-0813
wall of intestine7.16e-0813
gastrointestinal system mucosa7.16e-0813
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:62257059..62257102,%2B&oldid=3892167"