FFCP PHASE1:Mm9::chr9:69608731..69608742,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:69608731..69608742,-
|short_description=p2@Foxb1
|description=CAGE_peak_2_at_Foxb1_5end
|association_with_transcript=4bp_to_ENSMUST00000071281,NM_022378,uc...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=64290 | |EntrezGene=64290 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2470 | |||
|TSSclassifier=NA | |||
|UniProt=Q64732 | |UniProt=Q64732 | ||
|association_with_transcript=4bp_to_ENSMUST00000071281,NM_022378,uc012gwj.1_5end | |||
|cluster_id=chr9:69608731..69608742,- | |||
|description=CAGE_peak_2_at_Foxb1_5end | |||
|id=chr9:69608731..69608742,- | |||
|ontology_enrichment_celltype=CL:0000117!9.76e-19!23;CL:0000337!9.76e-19!23;CL:0000540!1.70e-11!33;CL:0000047!1.70e-11!33;CL:0000031!1.70e-11!33;CL:0000404!1.70e-11!33;CL:0002319!2.99e-11!43;CL:0000221!7.30e-11!44;CL:0000133!7.30e-11!44;CL:0000393!5.63e-09!39;CL:0000211!5.63e-09!39;CL:0000055!7.05e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-39,23;CL:0000337,2.77e-39,23;CL:0000540,6.36e-27,33;CL:0000047,6.36e-27,33;CL:0000031,6.36e-27,33;CL:0000404,6.36e-27,33;CL:0002319,9.05e-24,43;CL:0000221,3.43e-23,44;CL:0000133,3.43e-23,44;CL:0000393,1.54e-22,39;CL:0000211,1.54e-22,39;CL:0002613,6.33e-18,3;CL:0000120,2.60e-17,3;CL:0002321,6.23e-14,70;CL:0002611,1.54e-11,2;CL:0002614,7.77e-09,3;CL:0000723,1.12e-08,91;CL:0000048,1.12e-08,91;CL:0002612,2.81e-08,3;CL:0000034,5.00e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.45e-11!73;UBERON:0005743!4.45e-11!73;UBERON:0000073!1.43e-10!75;UBERON:0001016!1.43e-10!75;UBERON:0002420!2.99e-10!8;UBERON:0007245!2.99e-10!8;UBERON:0010009!2.99e-10!8;UBERON:0010011!2.99e-10!8;UBERON:0000454!2.99e-10!8;UBERON:0002298!3.93e-10!6;UBERON:0002240!4.38e-10!6;UBERON:0005174!4.38e-10!6;UBERON:0001137!4.38e-10!6;UBERON:0001948!6.39e-09!5;UBERON:0002315!6.39e-09!5;UBERON:0003076!7.14e-08!12;UBERON:0003057!7.14e-08!12;UBERON:0002950!1.61e-07!4;UBERON:0001891!1.61e-07!4;UBERON:0009616!1.61e-07!4;UBERON:0001049!4.68e-07!52;UBERON:0005068!4.68e-07!52;UBERON:0006241!4.68e-07!52;UBERON:0007135!4.68e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,3.63e-18,8;UBERON:0007245,3.63e-18,8;UBERON:0010009,3.63e-18,8;UBERON:0010011,3.63e-18,8;UBERON:0000454,3.63e-18,8;UBERON:0001948,1.57e-17,5;UBERON:0002315,1.57e-17,5;UBERON:0001017,1.98e-15,73;UBERON:0001016,5.72e-15,75;UBERON:0002240,1.17e-14,6;UBERON:0005174,1.17e-14,6;UBERON:0001137,1.17e-14,6;UBERON:0002950,1.50e-13,4;UBERON:0001891,1.50e-13,4;UBERON:0009616,1.50e-13,4;UBERON:0010286,1.50e-13,4;UBERON:0002020,2.32e-12,34;UBERON:0002256,1.54e-11,2;UBERON:0004121,2.02e-11,95;UBERON:0000924,2.02e-11,95;UBERON:0006601,2.02e-11,95;UBERON:0000073,4.48e-11,54;UBERON:0000369,5.54e-11,5;UBERON:0002435,5.54e-11,5;UBERON:0000204,5.54e-11,5;UBERON:0010082,5.54e-11,5;UBERON:0001049,1.56e-09,52;UBERON:0005068,1.56e-09,52;UBERON:0006241,1.56e-09,52;UBERON:0007135,1.56e-09,52;UBERON:0002038,7.77e-09,3;UBERON:0009663,7.77e-09,3;UBERON:0009661,7.77e-09,3;UBERON:0000125,7.77e-09,3;UBERON:0002308,7.77e-09,3;UBERON:0002257,2.81e-08,3;UBERON:0002346,1.71e-07,64;UBERON:0003075,1.71e-07,64;UBERON:0007284,1.71e-07,64;UBERON:0003076,1.94e-07,12;UBERON:0003057,1.94e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,2.87505128729943,0,0,0,0,0,0,2.83243045203437,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0,0,0,1.14260393761521,1.10434270475807,0,0,0,1.10115880999389,0.766124028511126,0.46081959976873,3.16527090552465,3.84248103130121,2.6045668527838,0.279182999001381,6.19038871034848,3.66715794664344,2.35702868378934,2.27794689278565,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0,0.251308704225729,0,0,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0,0,0.201932899896295,0.304827226619999,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0.309873682371932,0,0.249810577937946,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,2.87505128729943,0,0,0,0,0,0,2.83243045203437,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0,0,0,1.14260393761521,1.10434270475807,0,0,0,1.10115880999389,0.766124028511126,0.46081959976873,3.16527090552465,3.84248103130121,2.6045668527838,0.279182999001381,6.19038871034848,3.66715794664344,2.35702868378934,2.27794689278565,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0,0.251308704225729,0,0,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0,0,0.201932899896295,0.304827226619999,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0.309873682371932,0,0.249810577937946,0,0,0,0.441182838239031,0 | ||
|short_description=p2@Foxb1 | |||
}} | }} |
Latest revision as of 01:39, 27 September 2015
Short description: | p2@Foxb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Foxb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2470 |
Association with transcript: | 4bp_to_ENSMUST00000071281, NM_022378, uc012gwj.1_5end |
EntrezGene: | Foxb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.77e-39 | 23 |
neuroblast (sensu Vertebrata) | 2.77e-39 | 23 |
neuron | 6.36e-27 | 33 |
neuronal stem cell | 6.36e-27 | 33 |
neuroblast | 6.36e-27 | 33 |
electrically signaling cell | 6.36e-27 | 33 |
neural cell | 9.05e-24 | 43 |
ectodermal cell | 3.43e-23 | 44 |
neurectodermal cell | 3.43e-23 | 44 |
electrically responsive cell | 1.54e-22 | 39 |
electrically active cell | 1.54e-22 | 39 |
striatum neuron | 6.33e-18 | 3 |
granule cell | 2.60e-17 | 3 |
embryonic cell | 6.23e-14 | 70 |
neuron of the dorsal spinal cord | 1.54e-11 | 2 |
neuron of the substantia nigra | 7.77e-09 | 3 |
somatic stem cell | 1.12e-08 | 91 |
multi fate stem cell | 1.12e-08 | 91 |
neuron of the ventral spinal cord | 2.81e-08 | 3 |
stem cell | 5.00e-08 | 97 |