FFCP PHASE1:Mm9::chr9:79641185..79641216,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:79641185..79641216,-
|short_description=p3@Tmem30a
|description=CAGE_peak_3_at_Tmem30a_5end
|association_with_transcript=20bp_to_ENSMUST00000034878,ENSMUST...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69981 | |EntrezGene=69981 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VEK0 | |UniProt=Q8VEK0 | ||
|association_with_transcript=20bp_to_ENSMUST00000034878,ENSMUST00000130419,ENSMUST00000153815,NM_133718,uc009quw.2,uc009qux.1_5end | |||
|cluster_id=chr9:79641185..79641216,- | |||
|description=CAGE_peak_3_at_Tmem30a_5end | |||
|id=chr9:79641185..79641216,- | |||
|ontology_enrichment_celltype=CL:0000393!6.58e-11!39;CL:0000211!6.58e-11!39;CL:0000540!1.92e-10!33;CL:0000047!1.92e-10!33;CL:0000031!1.92e-10!33;CL:0000404!1.92e-10!33;CL:0000055!4.92e-09!50;CL:0000117!7.40e-09!23;CL:0000337!7.40e-09!23;CL:0000221!4.58e-08!44;CL:0000133!4.58e-08!44;CL:0002319!5.79e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.83e-11,39;CL:0000211,7.83e-11,39;CL:0000540,2.34e-10,33;CL:0000047,2.34e-10,33;CL:0000031,2.34e-10,33;CL:0000404,2.34e-10,33;CL:0000117,9.50e-09,23;CL:0000337,9.50e-09,23;CL:0000221,5.67e-08,44;CL:0000133,5.67e-08,44;CL:0002319,7.17e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.17e-22!102;UBERON:0000924!4.17e-22!102;UBERON:0006601!4.17e-22!102;UBERON:0000073!2.32e-21!75;UBERON:0001016!2.32e-21!75;UBERON:0001017!1.67e-20!73;UBERON:0005743!1.67e-20!73;UBERON:0002346!8.60e-17!71;UBERON:0003075!8.60e-17!71;UBERON:0007284!8.60e-17!71;UBERON:0001049!1.92e-16!52;UBERON:0005068!1.92e-16!52;UBERON:0006241!1.92e-16!52;UBERON:0007135!1.92e-16!52;UBERON:0000025!7.11e-16!114;UBERON:0004111!2.12e-15!122;UBERON:0000955!2.63e-15!50;UBERON:0006238!2.63e-15!50;UBERON:0002616!9.90e-15!49;UBERON:0002020!2.26e-14!34;UBERON:0000033!2.43e-14!63;UBERON:0003080!1.03e-12!40;UBERON:0002780!3.43e-12!39;UBERON:0001890!3.43e-12!39;UBERON:0006240!3.43e-12!39;UBERON:0003056!5.49e-12!49;UBERON:0002791!1.20e-11!29;UBERON:0003528!1.20e-11!29;UBERON:0001893!1.20e-11!29;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000956!4.89e-08!21;UBERON:0001869!4.89e-08!21;UBERON:0000203!4.89e-08!21;UBERON:0000477!4.37e-07!154;UBERON:0002619!5.18e-07!17;UBERON:0000483!6.10e-07!181 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.58e-21,95;UBERON:0000924,1.58e-21,95;UBERON:0006601,1.58e-21,95;UBERON:0001016,2.79e-21,75;UBERON:0001017,2.02e-20,73;UBERON:0000073,2.20e-17,54;UBERON:0010371,3.69e-17,73;UBERON:0002346,1.98e-16,64;UBERON:0003075,1.98e-16,64;UBERON:0007284,1.98e-16,64;UBERON:0001049,2.52e-16,52;UBERON:0005068,2.52e-16,52;UBERON:0006241,2.52e-16,52;UBERON:0007135,2.52e-16,52;UBERON:0000025,9.72e-16,114;UBERON:0004111,2.87e-15,122;UBERON:0002020,2.75e-14,34;UBERON:0010314,6.35e-14,92;UBERON:0000955,1.37e-13,47;UBERON:0006238,1.37e-13,47;UBERON:0002616,5.00e-13,46;UBERON:0003080,1.31e-12,40;UBERON:0002780,4.37e-12,39;UBERON:0001890,4.37e-12,39;UBERON:0006240,4.37e-12,39;UBERON:0003056,5.59e-12,49;UBERON:0003528,1.50e-11,29;UBERON:0002791,1.50e-11,29;UBERON:0001893,1.50e-11,29;UBERON:0002021,3.21e-08,10;UBERON:0000411,3.21e-08,10;UBERON:0001950,3.21e-08,10;UBERON:0000956,6.34e-08,21;UBERON:0001869,6.34e-08,21;UBERON:0000203,6.34e-08,21;UBERON:0002619,6.87e-07,17 | |||
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| ||
|short_description=p3@Tmem30a | |||
}} | }} |
Latest revision as of 04:46, 27 September 2015
Short description: | p3@Tmem30a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem30a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 20bp_to_ENSMUST00000034878, ENSMUST00000130419, ENSMUST00000153815, NM_133718, uc009quw.2, uc009qux.1_5end |
EntrezGene: | Tmem30a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.83e-11 | 39 |
electrically active cell | 7.83e-11 | 39 |
neuron | 2.34e-10 | 33 |
neuronal stem cell | 2.34e-10 | 33 |
neuroblast | 2.34e-10 | 33 |
electrically signaling cell | 2.34e-10 | 33 |
CNS neuron (sensu Vertebrata) | 9.50e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.50e-09 | 23 |
ectodermal cell | 5.67e-08 | 44 |
neurectodermal cell | 5.67e-08 | 44 |
neural cell | 7.17e-08 | 43 |