FFCP PHASE1:Mm9::chrX:160839069..160839076,+: Difference between revisions
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|id=chrX:160839069..160839076,+
|short_description=p@chrX:160839069..160839076,+
|description=CAGE_peak_at_chrX:160839069..160839076,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:160839069..160839076,+ | |||
|description=CAGE_peak_at_chrX:160839069..160839076,+ | |||
|id=chrX:160839069..160839076,+ | |||
|ontology_enrichment_celltype=CL:0000680!6.41e-17!6;CL:0000183!6.41e-17!6;CL:0000187!6.41e-17!6;CL:0000056!6.41e-17!6;CL:0000222!2.15e-14!7;CL:0000355!5.03e-11!9;CL:0002494!1.89e-09!3;CL:0000737!1.89e-09!3;CL:0000746!1.89e-09!3;CL:0000513!1.89e-09!3;CL:0000192!4.24e-09!3;CL:0000359!4.24e-09!3;CL:0002539!4.24e-09!3;CL:0000514!4.24e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.61e-30,3;CL:0000359,5.61e-30,3;CL:0002539,5.61e-30,3;CL:0000514,5.61e-30,3;CL:0000680,8.02e-16,6;CL:0000187,8.02e-16,6;CL:0000056,8.02e-16,6;CL:0000222,8.67e-14,7;CL:0000355,4.56e-11,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.03e-11!9;UBERON:0002036!5.03e-11!9;UBERON:0002385!5.03e-11!9;UBERON:0000486!5.03e-11!9;UBERON:0001015!5.03e-11!9;UBERON:0004290!5.03e-11!9;UBERON:0003082!5.03e-11!9;UBERON:0000383!7.62e-10!10;UBERON:0000914!1.53e-09!17;UBERON:0001135!4.24e-09!3;UBERON:0004237!4.24e-09!3;UBERON:0004695!4.24e-09!3;UBERON:0002111!4.24e-09!3;UBERON:0004178!4.24e-09!3;UBERON:0005153!6.76e-09!17;UBERON:0002329!7.04e-09!11;UBERON:0003077!7.04e-09!11;UBERON:0003059!7.04e-09!11;UBERON:0007282!7.04e-09!11;UBERON:0009618!7.04e-09!11;UBERON:0007285!7.04e-09!11;UBERON:0002048!1.88e-08!14;UBERON:0000117!1.88e-08!14;UBERON:0000171!1.88e-08!14;UBERON:0000170!1.88e-08!14;UBERON:0005597!1.88e-08!14;UBERON:0000118!1.88e-08!14;UBERON:0005157!6.22e-08!27;UBERON:0000947!6.63e-07!4;UBERON:0001637!6.63e-07!4;UBERON:0003509!6.63e-07!4;UBERON:0004573!6.63e-07!4;UBERON:0004571!6.63e-07!4;UBERON:0010191!6.63e-07!4;UBERON:0004572!6.63e-07!4;UBERON:0005178!8.79e-07!17;UBERON:0005181!8.79e-07!17;UBERON:0002224!8.79e-07!17;UBERON:0000915!8.79e-07!17;UBERON:0008947!8.79e-07!17;UBERON:0003258!8.79e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.61e-30,3;UBERON:0004237,5.61e-30,3;UBERON:0004695,5.61e-30,3;UBERON:0002111,5.61e-30,3;UBERON:0004178,5.61e-30,3;UBERON:0000947,6.52e-23,4;UBERON:0001637,6.52e-23,4;UBERON:0004573,6.52e-23,4;UBERON:0003509,6.52e-23,4;UBERON:0004571,6.52e-23,4;UBERON:0010191,6.52e-23,4;UBERON:0004572,6.52e-23,4;UBERON:0000055,1.16e-18,5;UBERON:0007500,1.16e-18,5;UBERON:0001981,1.16e-18,5;UBERON:0002049,1.16e-18,5;UBERON:0007798,1.16e-18,5;UBERON:0004537,1.16e-18,5;UBERON:0006965,1.16e-18,5;UBERON:0001134,4.56e-11,9;UBERON:0002036,4.56e-11,9;UBERON:0002385,4.56e-11,9;UBERON:0000486,4.56e-11,9;UBERON:0007503,4.56e-11,9;UBERON:0001015,4.56e-11,9;UBERON:0002329,4.56e-11,9;UBERON:0003082,4.56e-11,9;UBERON:0003059,4.56e-11,9;UBERON:0007282,4.56e-11,9;UBERON:0004290,4.56e-11,9;UBERON:0009618,4.56e-11,9;UBERON:0000383,4.12e-10,10;UBERON:0007524,2.51e-09,11;UBERON:0003077,2.51e-09,11;UBERON:0007285,2.51e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.82478476195126,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.163863314715738,0.518054945597687,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.82478476195126,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.163863314715738,0.518054945597687,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chrX:160839069..160839076,+ | |||
}} | }} |
Latest revision as of 04:14, 6 August 2015
Short description: | p@chrX:160839069..160839076, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:160839069..160839076, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.61e-30 | 3 |
vascular associated smooth muscle cell | 5.61e-30 | 3 |
aortic smooth muscle cell | 5.61e-30 | 3 |
smooth muscle myoblast | 5.61e-30 | 3 |
muscle precursor cell | 8.02e-16 | 6 |
muscle cell | 8.02e-16 | 6 |
myoblast | 8.02e-16 | 6 |
mesodermal cell | 8.67e-14 | 7 |
multi-potent skeletal muscle stem cell | 4.56e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.61e-30 | 3 |
blood vessel smooth muscle | 5.61e-30 | 3 |
arterial system smooth muscle | 5.61e-30 | 3 |
artery smooth muscle tissue | 5.61e-30 | 3 |
aorta smooth muscle tissue | 5.61e-30 | 3 |
aorta | 6.52e-23 | 4 |
artery | 6.52e-23 | 4 |
systemic artery | 6.52e-23 | 4 |
arterial blood vessel | 6.52e-23 | 4 |
systemic arterial system | 6.52e-23 | 4 |
aortic system | 6.52e-23 | 4 |
arterial system | 6.52e-23 | 4 |
vessel | 1.16e-18 | 5 |
epithelial tube open at both ends | 1.16e-18 | 5 |
blood vessel | 1.16e-18 | 5 |
vasculature | 1.16e-18 | 5 |
vascular system | 1.16e-18 | 5 |
blood vasculature | 1.16e-18 | 5 |
vascular cord | 1.16e-18 | 5 |
skeletal muscle tissue | 4.56e-11 | 9 |
striated muscle tissue | 4.56e-11 | 9 |
muscle tissue | 4.56e-11 | 9 |
multilaminar epithelium | 4.56e-11 | 9 |
epithelial vesicle | 4.56e-11 | 9 |
musculature | 4.56e-11 | 9 |
somite | 4.56e-11 | 9 |
myotome | 4.56e-11 | 9 |
presomitic mesoderm | 4.56e-11 | 9 |
presumptive segmental plate | 4.56e-11 | 9 |
dermomyotome | 4.56e-11 | 9 |
trunk paraxial mesoderm | 4.56e-11 | 9 |
musculature of body | 4.12e-10 | 10 |
dense mesenchyme tissue | 2.51e-09 | 11 |
paraxial mesoderm | 2.51e-09 | 11 |
presumptive paraxial mesoderm | 2.51e-09 | 11 |