FFCP PHASE1:Mm9::chrX:98463521..98463548,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:98463521..98463548,-
|short_description=p1@Il2rg
|description=CAGE_peak_1_at_Il2rg_5end
|association_with_transcript=0bp_to_ENSMUST00000145074,NM_013563,uc...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16186 | |EntrezGene=16186 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1285 | |||
|TSSclassifier=NA | |||
|UniProt=P34902,Q3UPA9 | |UniProt=P34902,Q3UPA9 | ||
|association_with_transcript=0bp_to_ENSMUST00000145074,NM_013563,uc009txc.1,uc009txd.1_5end | |||
|cluster_id=chrX:98463521..98463548,- | |||
|description=CAGE_peak_1_at_Il2rg_5end | |||
|id=chrX:98463521..98463548,- | |||
|ontology_enrichment_celltype=CL:0000988!6.60e-10!32;CL:0002032!6.60e-10!32;CL:0000037!6.60e-10!32;CL:0000566!6.60e-10!32;CL:0000837!6.60e-10!32;CL:0000838!4.22e-09!12;CL:0000738!1.13e-08!17;CL:0002087!1.13e-08!17;CL:0002031!1.73e-08!25;CL:0000084!1.83e-08!11;CL:0000827!1.83e-08!11;CL:0000542!2.77e-08!13;CL:0000051!2.77e-08!13;CL:0000791!1.70e-07!9;CL:0000789!1.70e-07!9;CL:0002420!1.70e-07!9;CL:0002419!1.70e-07!9;CL:0000790!1.70e-07!9;CL:0000624!7.40e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.52e-10,32;CL:0002032,7.52e-10,32;CL:0000037,7.52e-10,32;CL:0000837,7.52e-10,32;CL:0000838,3.86e-09,12;CL:0000738,1.04e-08,17;CL:0002087,1.04e-08,17;CL:0000084,1.68e-08,11;CL:0000827,1.68e-08,11;CL:0002031,2.01e-08,25;CL:0000542,2.56e-08,13;CL:0000051,2.56e-08,13;CL:0000791,1.58e-07,9;CL:0000789,1.58e-07,9;CL:0002420,1.58e-07,9;CL:0002419,1.58e-07,9;CL:0000790,1.58e-07,9;CL:0000624,6.94e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.03e-19!48;UBERON:0003081!1.33e-18!88;UBERON:0002390!2.06e-17!45;UBERON:0003061!2.06e-17!45;UBERON:0000926!1.24e-16!193;UBERON:0004120!1.24e-16!193;UBERON:0006603!1.24e-16!193;UBERON:0002405!1.02e-14!70;UBERON:0004177!8.91e-12!29;UBERON:0003104!4.93e-10!131;UBERON:0009142!4.93e-10!131;UBERON:0001004!1.02e-09!42;UBERON:0003408!1.70e-09!24;UBERON:0000065!1.94e-09!41;UBERON:0002370!3.17e-09!23;UBERON:0000974!3.17e-09!23;UBERON:0004807!3.17e-09!23;UBERON:0005058!3.17e-09!23;UBERON:0003351!3.17e-09!23;UBERON:0009113!3.17e-09!23;UBERON:0003295!3.17e-09!23;UBERON:0009722!3.17e-09!23;UBERON:0005562!3.17e-09!23;UBERON:0007690!3.17e-09!23;UBERON:0000077!4.01e-09!97;UBERON:0006562!7.60e-09!24;UBERON:0001557!7.60e-09!24;UBERON:0001042!7.60e-09!24;UBERON:0008814!7.60e-09!24;UBERON:0009145!7.60e-09!24;UBERON:0001041!1.21e-08!92;UBERON:0005057!4.05e-08!51;UBERON:0004119!7.77e-07!130;UBERON:0000925!7.77e-07!130;UBERON:0006595!7.77e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.71e-19,48;UBERON:0002405,3.71e-19,48;UBERON:0003081,4.48e-18,87;UBERON:0002390,1.11e-17,45;UBERON:0003061,1.11e-17,45;UBERON:0000926,3.54e-13,120;UBERON:0004120,3.54e-13,120;UBERON:0006603,3.54e-13,120;UBERON:0000077,4.31e-12,35;UBERON:0004177,5.19e-12,29;UBERON:0005057,5.19e-12,29;UBERON:0001004,7.48e-10,42;UBERON:0003408,1.04e-09,24;UBERON:0000065,1.44e-09,41;UBERON:0002370,1.93e-09,23;UBERON:0000974,1.93e-09,23;UBERON:0004807,1.93e-09,23;UBERON:0005058,1.93e-09,23;UBERON:0003351,1.93e-09,23;UBERON:0009113,1.93e-09,23;UBERON:0003295,1.93e-09,23;UBERON:0009722,1.93e-09,23;UBERON:0005562,1.93e-09,23;UBERON:0007690,1.93e-09,23;UBERON:0006562,4.73e-09,24;UBERON:0001557,4.73e-09,24;UBERON:0001042,4.73e-09,24;UBERON:0008814,4.73e-09,24;UBERON:0009145,4.73e-09,24;UBERON:0001041,2.04e-08,80;UBERON:0000072,8.26e-07,27 | |||
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| ||
|short_description=p1@Il2rg | |||
}} | }} |
Latest revision as of 00:57, 2 October 2015
Short description: | p1@Il2rg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Il2rg_5end |
Coexpression cluster: | MCL_coexpression_mm9:1285 |
Association with transcript: | 0bp_to_ENSMUST00000145074, NM_013563, uc009txc.1, uc009txd.1_5end |
EntrezGene: | Il2rg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.52e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.52e-10 | 32 |
hematopoietic stem cell | 7.52e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.52e-10 | 32 |
lymphoid lineage restricted progenitor cell | 3.86e-09 | 12 |
leukocyte | 1.04e-08 | 17 |
nongranular leukocyte | 1.04e-08 | 17 |
T cell | 1.68e-08 | 11 |
pro-T cell | 1.68e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 2.01e-08 | 25 |
lymphocyte | 2.56e-08 | 13 |
common lymphoid progenitor | 2.56e-08 | 13 |
mature alpha-beta T cell | 1.58e-07 | 9 |
alpha-beta T cell | 1.58e-07 | 9 |
immature T cell | 1.58e-07 | 9 |
mature T cell | 1.58e-07 | 9 |
immature alpha-beta T cell | 1.58e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.71e-19 | 48 |
immune system | 3.71e-19 | 48 |
lateral plate mesoderm | 4.48e-18 | 87 |
hematopoietic system | 1.11e-17 | 45 |
blood island | 1.11e-17 | 45 |
mesoderm | 3.54e-13 | 120 |
mesoderm-derived structure | 3.54e-13 | 120 |
presumptive mesoderm | 3.54e-13 | 120 |
mixed endoderm/mesoderm-derived structure | 4.31e-12 | 35 |
hemopoietic organ | 5.19e-12 | 29 |
immune organ | 5.19e-12 | 29 |
respiratory system | 7.48e-10 | 42 |
gland of gut | 1.04e-09 | 24 |
respiratory tract | 1.44e-09 | 41 |
thymus | 1.93e-09 | 23 |
neck | 1.93e-09 | 23 |
respiratory system epithelium | 1.93e-09 | 23 |
hemolymphoid system gland | 1.93e-09 | 23 |
pharyngeal epithelium | 1.93e-09 | 23 |
thymic region | 1.93e-09 | 23 |
pharyngeal gland | 1.93e-09 | 23 |
entire pharyngeal arch endoderm | 1.93e-09 | 23 |
thymus primordium | 1.93e-09 | 23 |
early pharyngeal endoderm | 1.93e-09 | 23 |
pharynx | 4.73e-09 | 24 |
upper respiratory tract | 4.73e-09 | 24 |
chordate pharynx | 4.73e-09 | 24 |
pharyngeal arch system | 4.73e-09 | 24 |
pharyngeal region of foregut | 4.73e-09 | 24 |
foregut | 2.04e-08 | 80 |
segment of respiratory tract | 8.26e-07 | 27 |