FFCP PHASE1:Hg19::chr10:104192322..104192379,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:104192322..104192379,- to FFCP PHASE1:Hg19::chr10:104192322..104192379,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79004 | |EntrezGene=79004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28352 | |HGNC=28352 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477994,ENST00000486762_5end | |||
|cluster_id=chr10:104192322..104192379,- | |||
|coexpression_cluster_id=C2973 | |||
|description=CAGE_peak_1_at_CUEDC2_5end | |||
|id=chr10:104192322..104192379,- | |||
|ontology_enrichment_celltype=CL:0000222!1.14e-22!119;CL:0000183!6.80e-20!59;CL:0000055!1.83e-19!180;CL:0000220!2.28e-19!246;CL:0002321!7.26e-19!248;CL:0000187!5.18e-17!54;CL:0000393!8.54e-17!60;CL:0000211!8.54e-17!60;CL:0000680!8.54e-17!57;CL:0000056!8.54e-17!57;CL:0000355!8.54e-17!57;CL:0000192!5.21e-14!42;CL:0000514!5.21e-14!42;CL:0000359!2.07e-11!32;CL:0000115!3.71e-09!35;CL:0002078!4.33e-09!44;CL:0002371!2.57e-08!591;CL:0000144!4.69e-08!625;CL:1000449!3.65e-07!16;CL:0002139!4.14e-07!24;CL:0000213!6.20e-07!57;CL:0000215!6.20e-07!57;CL:0000071!9.22e-07!18;CL:0002546!9.22e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.65e-11;32!CL:0000192;1.88e-10;43!CL:0000187;3.37e-10;55!CL:0000393;2.82e-09;61!CL:0000211;2.82e-09;61!CL:0000115;5.42e-08;36!CL:0002139;3.92e-07;24!CL:0002078;4.83e-07;45!CL:1000449;7.10e-07;15!CL:0000071;9.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.64e-23,121;CL:0002321,1.45e-19,250;CL:0000187,1.94e-17,55;CL:0000680,3.23e-17,58;CL:0000056,3.23e-17,58;CL:0000355,3.23e-17,58;CL:0000393,3.25e-17,61;CL:0000211,3.25e-17,61;CL:0000192,1.98e-14,43;CL:0000514,1.98e-14,43;CL:0000359,2.07e-11,32;CL:0000115,1.48e-09,36;CL:0002078,1.80e-09,45;CL:0000213,2.95e-07,58;CL:0000215,2.95e-07,58;CL:0002139,4.14e-07,24;CL:0000071,9.22e-07,18;CL:0002546,9.22e-07,18;CL:1000449,9.50e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-10;43!CL:0000355;1.31e-09;58!CL:0000222;2.67e-07;121!CL:0002546;9.51e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!6.72e-21!312;UBERON:0000483!1.41e-20!309;UBERON:0000914!1.68e-19!83;UBERON:0002329!1.68e-19!83;UBERON:0003077!1.68e-19!83;UBERON:0003059!1.68e-19!83;UBERON:0007282!1.68e-19!83;UBERON:0009618!1.68e-19!83;UBERON:0007285!1.68e-19!83;UBERON:0000486!1.95e-19!82;UBERON:0004290!2.40e-19!70;UBERON:0002049!5.96e-18!79;UBERON:0007798!5.96e-18!79;UBERON:0001134!1.05e-16!61;UBERON:0002036!1.05e-16!61;UBERON:0003082!1.05e-16!61;UBERON:0002385!3.88e-15!63;UBERON:0001015!3.88e-15!63;UBERON:0000383!3.88e-15!63;UBERON:0004872!2.43e-14!84;UBERON:0005256!4.18e-14!143;UBERON:0000481!5.50e-14!347;UBERON:0000055!1.57e-13!69;UBERON:0000475!5.46e-13!365;UBERON:0001981!1.05e-12!60;UBERON:0007500!1.05e-12!60;UBERON:0004537!1.05e-12!60;UBERON:0006965!1.05e-12!60;UBERON:0003914!1.92e-12!118;UBERON:0000025!1.29e-11!194;UBERON:0001009!1.43e-11!113;UBERON:0004535!4.19e-11!110;UBERON:0000490!5.07e-11!138;UBERON:0001637!5.21e-11!42;UBERON:0003509!5.21e-11!42;UBERON:0004572!5.21e-11!42;UBERON:0000477!5.23e-11!286;UBERON:0004111!5.68e-10!241;UBERON:0002100!2.40e-08!216;UBERON:0000064!3.26e-08!219;UBERON:0004573!1.14e-07!33;UBERON:0004571!1.14e-07!33;UBERON:0003104!1.83e-07!238;UBERON:0009142!1.83e-07!238;UBERON:0003103!1.84e-07!69;UBERON:0004211!3.65e-07!16;UBERON:0001285!3.65e-07!16;UBERON:0007684!3.65e-07!16;UBERON:0003220!3.65e-07!16;UBERON:0004208!3.65e-07!16;UBERON:0000924!7.03e-07!173;UBERON:0006601!7.03e-07!173;UBERON:0001986!9.22e-07!18;UBERON:0004638!9.22e-07!18;UBERON:0004852!9.22e-07!18;UBERON:0000353!9.61e-07!17;UBERON:0006555!9.71e-07!17;UBERON:0005103!9.71e-07!17;UBERON:0000083!9.71e-07!17;UBERON:0009201!9.71e-07!17;UBERON:0004819!9.71e-07!17;UBERON:0006553!9.71e-07!17;UBERON:0003074!9.71e-07!17;UBERON:0003060!9.71e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.37e-08;56!UBERON:0001981;1.37e-08;56!UBERON:0004537;1.37e-08;56!UBERON:0003914;1.48e-08;74!UBERON:0002049;1.73e-08;75!UBERON:0007798;1.73e-08;75!UBERON:0001637;6.62e-08;42!UBERON:0003509;6.62e-08;42!UBERON:0004572;6.62e-08;42!UBERON:0000055;2.65e-07;65!UBERON:0004573;6.62e-07;33!UBERON:0004571;6.62e-07;33!UBERON:0006555;7.10e-07;15!UBERON:0004819;7.10e-07;15!UBERON:0001285;7.10e-07;15!UBERON:0007684;7.10e-07;15!UBERON:0000353;9.20e-07;15!UBERON:0004638;9.51e-07;18!UBERON:0001986;9.51e-07;18!UBERON:0004852;9.51e-07;18 | |||
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| ||
|short_description=p1@CUEDC2 | |||
}} | }} |
Latest revision as of 01:21, 16 September 2015
Short description: | p1@CUEDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CUEDC2_5end |
Coexpression cluster: | C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte |
Association with transcript: | 0bp_to_ENST00000477994, ENST00000486762_5end |
EntrezGene: | CUEDC2 |
HGNC: | 28352 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.64e-23 | 121 |
embryonic cell | 1.45e-19 | 250 |
muscle cell | 1.94e-17 | 55 |
muscle precursor cell | 3.23e-17 | 58 |
myoblast | 3.23e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.23e-17 | 58 |
electrically responsive cell | 3.25e-17 | 61 |
electrically active cell | 3.25e-17 | 61 |
smooth muscle cell | 1.98e-14 | 43 |
smooth muscle myoblast | 1.98e-14 | 43 |
vascular associated smooth muscle cell | 2.07e-11 | 32 |
endothelial cell | 1.48e-09 | 36 |
meso-epithelial cell | 1.80e-09 | 45 |
lining cell | 2.95e-07 | 58 |
barrier cell | 2.95e-07 | 58 |
endothelial cell of vascular tree | 4.14e-07 | 24 |
blood vessel endothelial cell | 9.22e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.22e-07 | 18 |
epithelial cell of nephron | 9.50e-07 | 15 |