FFCP PHASE1:Hg19::chr10:112044697..112044712,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:112044697..112044712,+ to FFCP PHASE1:Hg19::chr10:112044697..112044712,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:112044697..112044712,+ | |||
|description=CAGE_peak_at_chr10:112044697..112044712,+ | |||
|id=chr10:112044697..112044712,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.66e-09;3!CL:0000228;5.28e-07;1!CL:0002372;5.28e-07;1!CL:0002616;5.28e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.99e-09,3;CL:0002616,3.01e-07,1;CL:0000228,4.57e-07,1;CL:0002372,4.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.54e-07;1!UBERON:0010227;2.03e-07;1!UBERON:0005754;5.28e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.99e-24!115;UBERON:0001049!2.28e-11!57;UBERON:0005068!2.28e-11!57;UBERON:0006241!2.28e-11!57;UBERON:0007135!2.28e-11!57;UBERON:0002616!1.66e-09!59;UBERON:0003080!1.89e-09!42;UBERON:0002780!6.31e-09!41;UBERON:0001890!6.31e-09!41;UBERON:0006240!6.31e-09!41;UBERON:0000955!7.82e-09!69;UBERON:0006238!7.82e-09!69;UBERON:0000073!2.14e-08!94;UBERON:0001016!2.14e-08!94;UBERON:0001017!2.20e-08!82;UBERON:0005743!2.60e-08!86;UBERON:0002020!3.75e-08!34;UBERON:0003528!3.75e-08!34;UBERON:0001893!1.57e-07!34;UBERON:0002791!2.05e-07!33;UBERON:0000178!5.83e-07!15;UBERON:0000179!5.83e-07!15;UBERON:0000463!5.83e-07!15;UBERON:0001869!7.73e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-09;15!UBERON:0000179;1.08e-09;15!UBERON:0000463;1.08e-09;15!UBERON:0006947;1.61e-08;3!UBERON:0004054;1.61e-08;3!UBERON:0000941;1.54e-07;1!UBERON:0001785;1.54e-07;1!UBERON:0002464;1.54e-07;1!UBERON:0004904;1.54e-07;1!UBERON:0001021;1.54e-07;1!UBERON:0002079;2.03e-07;1!UBERON:0002038;5.28e-07;1!UBERON:0003112;5.28e-07;1!UBERON:0001000;5.28e-07;1!UBERON:0000998;5.28e-07;1!UBERON:0006868;5.28e-07;1!UBERON:0011158;5.28e-07;1!UBERON:0009661;5.28e-07;1!UBERON:0002950;5.28e-07;1!UBERON:0005352;5.28e-07;1!UBERON:0003128;5.28e-07;1!UBERON:0001891;5.28e-07;1!UBERON:0001703;5.28e-07;1!UBERON:0002241;5.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.53e-16,114;UBERON:0000178,7.73e-10,15;UBERON:0000179,7.73e-10,15;UBERON:0000463,7.73e-10,15;UBERON:0006947,1.56e-08,3;UBERON:0004054,1.56e-08,3;UBERON:0000941,1.55e-07,1;UBERON:0001785,1.55e-07,1;UBERON:0002464,1.55e-07,1;UBERON:0004904,1.55e-07,1;UBERON:0001021,1.55e-07,1;UBERON:0003902,1.55e-07,1;UBERON:0005425,1.55e-07,1;UBERON:0002079,2.10e-07,1;UBERON:0000998,3.40e-07,1;UBERON:0006868,3.40e-07,1;UBERON:0003112,4.06e-07,1;UBERON:0011158,4.06e-07,1;UBERON:0003128,4.06e-07,1;UBERON:0001703,4.06e-07,1;UBERON:0002241,4.06e-07,1;UBERON:0004761,4.06e-07,1;UBERON:0009617,4.06e-07,1;UBERON:0002038,4.31e-07,1;UBERON:0009661,4.31e-07,1;UBERON:0002950,4.31e-07,1;UBERON:0001891,4.31e-07,1;UBERON:0009616,4.31e-07,1;UBERON:0010286,4.31e-07,1;UBERON:0001000,7.73e-07,1;UBERON:0005352,7.73e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,0,0.545812300115692,0,0.306083892370903,0,1.27867425159808,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,1.57204305099666,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,1.06976078313403,0.289648807765598,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.283550194484773,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,1.14330573052231,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0.224170287987055,0,0.431255149719035,0.128343036279748,0,0,0.773288812777695,0.502548796003046,0,2.99602809578873,2.99161459204025,0.414415513436035,0.24538298343828,0.500170521059677,0,0.207970861530807,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0.841980283299221,0.512556597022804,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0.276242966807689,0,0,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.3071772551245,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0.382838137483752,0.30347334256665,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0.764637207142375,1.70894156152249,0.714695326373367,0.411362273086194,1.94541993357815,0.540031437238115,3.96562588147135,0,0,0,0,0.28853842595289,0,0.159426272728822,0.199579371432817,0,0,0.973865820823666,0.280797178113459,0.228234679033192,0.47003968731907,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.445773537109913,0,0,0,0.921482106297696,0,0.703347082052564,0.111308705022906,0.494411622680279,0.211125408127993,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,2.3948309234694,0,0,0.556608588971108,0,0.260427761085233,0,0.724999575434793,0.227586896570999,0,0,0,0.874813840149763,0,0.885741385813839,0.60298219312704,1.52581736317083,0.774054819518572,0.295547618953547,0.219385397153973,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0,0.189753732724185,0,0.210998064528027,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0.208843899010911,0.134802265961354,0,0.234264445725339,0.364909578431332,0.391329237864179,0,1.18375320854817,0,0.61214552326098,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0,0.17472666824203,0.51595809741485,0.870806981601766,0.219267951258557,0.0821154570532092,0.290967049465258,0,2.03382666702479,0.137041924646751,0,0.126621591911757,0.195551382734803,0.0801588202515337,0.426905989478705,0,0,0.114536596165916,0.343189995723929,0.432164393964449,0,0.235694034616795,0,0.104602846312333,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0,0,0.599037001496973,1.28767814440971,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0.169346664131569,0,0.544813624446302,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0.387848869084652,0.52893040697076,0,0,0.106787412567695,0,0.41423905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| ||
|short_description=p@chr10:112044697..112044712,+ | |||
}} | }} |
Latest revision as of 10:20, 23 July 2015
Short description: | p@chr10:112044697..112044712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112044697..112044712, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.99e-09 | 3 |
perirenal adipocyte cell | 3.01e-07 | 1 |
multinucleate cell | 4.57e-07 | 1 |
myotube | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.53e-16 | 114 |
blood | 7.73e-10 | 15 |
haemolymphatic fluid | 7.73e-10 | 15 |
organism substance | 7.73e-10 | 15 |
male genital duct | 1.56e-08 | 3 |
internal male genitalia | 1.56e-08 | 3 |
cranial nerve II | 1.55e-07 | 1 |
cranial nerve | 1.55e-07 | 1 |
nerve trunk | 1.55e-07 | 1 |
nerve connecting eye with brain | 1.55e-07 | 1 |
nerve | 1.55e-07 | 1 |
retinal neural layer | 1.55e-07 | 1 |
presumptive neural retina | 1.55e-07 | 1 |
left cardiac atrium | 2.10e-07 | 1 |
seminal vesicle | 3.40e-07 | 1 |
seminal fluid secreting gland | 3.40e-07 | 1 |
olfactory region | 4.06e-07 | 1 |
primary subdivision of skull | 4.06e-07 | 1 |
cranium | 4.06e-07 | 1 |
neurocranium | 4.06e-07 | 1 |
chondrocranium | 4.06e-07 | 1 |
cartilaginous neurocranium | 4.06e-07 | 1 |
head paraxial mesoderm | 4.06e-07 | 1 |
substantia nigra | 4.31e-07 | 1 |
midbrain nucleus | 4.31e-07 | 1 |
regional part of midbrain | 4.31e-07 | 1 |
midbrain | 4.31e-07 | 1 |
presumptive midbrain | 4.31e-07 | 1 |
midbrain neural tube | 4.31e-07 | 1 |
vas deferens | 7.73e-07 | 1 |
spermatic cord | 7.73e-07 | 1 |