FFCP PHASE1:Hg19::chr10:118897775..118897786,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:118897775..118897786,- to FFCP PHASE1:Hg19::chr10:118897775..118897786,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11023 | |EntrezGene=11023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12660 | |HGNC=12660 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQQ9 | |UniProt=Q5SQQ9 | ||
|association_with_transcript=25bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |||
|cluster_id=chr10:118897775..118897786,- | |||
|description=CAGE_peak_2_at_VAX1_5end | |||
|id=chr10:118897775..118897786,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.58e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;8.93e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.12e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.51e-59!82;UBERON:0001049!3.39e-57!57;UBERON:0005068!3.39e-57!57;UBERON:0006241!3.39e-57!57;UBERON:0007135!3.39e-57!57;UBERON:0000073!4.11e-56!94;UBERON:0001016!4.11e-56!94;UBERON:0005743!7.26e-56!86;UBERON:0002780!1.83e-52!41;UBERON:0001890!1.83e-52!41;UBERON:0006240!1.83e-52!41;UBERON:0003080!5.62e-51!42;UBERON:0001893!5.26e-50!34;UBERON:0001869!1.13e-49!32;UBERON:0002616!2.10e-49!59;UBERON:0000955!2.21e-49!69;UBERON:0006238!2.21e-49!69;UBERON:0002020!3.95e-49!34;UBERON:0003528!3.95e-49!34;UBERON:0002791!4.05e-48!33;UBERON:0002346!1.78e-46!90;UBERON:0003075!2.80e-42!86;UBERON:0007284!2.80e-42!86;UBERON:0003056!1.06e-37!61;UBERON:0000956!1.99e-36!25;UBERON:0000203!1.99e-36!25;UBERON:0000924!1.36e-35!173;UBERON:0006601!1.36e-35!173;UBERON:0004121!2.83e-32!169;UBERON:0001950!5.91e-32!20;UBERON:0002619!6.93e-32!22;UBERON:0000033!5.40e-27!123;UBERON:0007023!3.95e-26!115;UBERON:0000153!4.35e-25!129;UBERON:0007811!4.35e-25!129;UBERON:0002420!2.22e-14!9;UBERON:0007245!2.22e-14!9;UBERON:0010009!2.22e-14!9;UBERON:0010011!2.22e-14!9;UBERON:0000454!2.22e-14!9;UBERON:0000025!6.30e-14!194;UBERON:0002308!6.51e-14!9;UBERON:0000125!6.51e-14!9;UBERON:0000200!1.48e-12!6;UBERON:0001871!7.93e-12!7;UBERON:0009663!5.99e-11!7;UBERON:0001872!6.31e-11!5;UBERON:0004111!1.99e-10!241;UBERON:0000483!5.63e-10!309;UBERON:0000119!9.88e-10!312;UBERON:0000369!5.22e-09!4;UBERON:0002435!5.22e-09!4;UBERON:0000204!5.22e-09!4;UBERON:0010082!5.22e-09!4;UBERON:0003076!1.53e-08!15;UBERON:0003057!1.53e-08!15;UBERON:0000477!3.23e-08!286;UBERON:0004732!3.46e-08!13;UBERON:0000064!5.91e-08!219;UBERON:0002298!8.10e-08!8;UBERON:0002021!2.27e-07!5;UBERON:0000475!3.04e-07!365;UBERON:0005383!4.41e-07!3;UBERON:0005382!4.41e-07!3;UBERON:0000349!6.21e-07!5;UBERON:0000922!8.14e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.02e-37;34!UBERON:0001869;3.32e-36;32!UBERON:0002791;1.17e-32;32!UBERON:0003528;2.54e-31;34!UBERON:0002020;2.54e-31;34!UBERON:0002780;1.56e-30;41!UBERON:0001890;1.56e-30;41!UBERON:0001950;1.38e-28;20!UBERON:0002619;7.04e-26;22!UBERON:0000956;1.35e-22;25!UBERON:0000203;1.35e-22;25!UBERON:0000073;1.26e-20;53!UBERON:0002616;1.26e-20;53!UBERON:0001016;2.29e-18;83!UBERON:0001017;9.07e-18;75!UBERON:0002420;2.81e-17;9!UBERON:0007245;2.81e-17;9!UBERON:0010009;2.81e-17;9!UBERON:0010011;2.81e-17;9!UBERON:0000454;2.81e-17;9!UBERON:0000955;8.09e-17;68!UBERON:0009663;8.19e-16;7!UBERON:0001872;4.58e-15;5!UBERON:0000200;2.55e-12;6!UBERON:0000125;3.02e-12;9!UBERON:0002308;3.02e-12;9!UBERON:0002346;2.28e-11;4!UBERON:0000923;2.28e-11;4!UBERON:0010316;2.28e-11;4!UBERON:0005291;2.28e-11;4!UBERON:0005162;6.98e-11;2!UBERON:0000122;6.98e-11;2!UBERON:0003714;1.05e-10;2!UBERON:0000369;2.18e-10;4!UBERON:0002435;2.18e-10;4!UBERON:0000204;2.18e-10;4!UBERON:0001875;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0001897;1.09e-09;2!UBERON:0010225;1.09e-09;2!UBERON:0002050;3.54e-09;5!UBERON:0005423;3.54e-09;5!UBERON:0002021;6.25e-09;5!UBERON:0007023;2.04e-07;114!UBERON:0001870;5.55e-07;3!UBERON:0005383;9.89e-07;3!UBERON:0005382;9.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.30e-47,41;UBERON:0001890,4.30e-47,41;UBERON:0003080,4.30e-47,41;UBERON:0006240,4.30e-47,41;UBERON:0001893,2.18e-42,34;UBERON:0001869,3.27e-40,32;UBERON:0001016,3.57e-40,89;UBERON:0001017,7.75e-39,81;UBERON:0000073,7.76e-39,53;UBERON:0002616,7.76e-39,53;UBERON:0000955,1.82e-37,68;UBERON:0006238,1.82e-37,68;UBERON:0001049,1.68e-36,56;UBERON:0005068,1.68e-36,56;UBERON:0006241,1.68e-36,56;UBERON:0007135,1.68e-36,56;UBERON:0002791,9.38e-36,32;UBERON:0003528,1.76e-33,34;UBERON:0002020,1.76e-33,34;UBERON:0003056,2.07e-33,61;UBERON:0002346,5.95e-32,86;UBERON:0001950,1.14e-28,20;UBERON:0002619,5.93e-26,22;UBERON:0003075,8.32e-26,82;UBERON:0007284,8.32e-26,82;UBERON:0004121,1.05e-22,171;UBERON:0000924,1.05e-22,171;UBERON:0006601,1.05e-22,171;UBERON:0000956,1.16e-22,25;UBERON:0000203,1.16e-22,25;UBERON:0010371,3.28e-19,104;UBERON:0007023,6.36e-19,114;UBERON:0011216,5.33e-18,223;UBERON:0002420,1.19e-17,9;UBERON:0007245,1.19e-17,9;UBERON:0010009,1.19e-17,9;UBERON:0010011,1.19e-17,9;UBERON:0000454,1.19e-17,9;UBERON:0009663,4.66e-16,7;UBERON:0010314,1.78e-15,132;UBERON:0001872,4.36e-15,5;UBERON:0000125,1.96e-12,9;UBERON:0002308,1.96e-12,9;UBERON:0000200,2.72e-12,6;UBERON:0005162,6.85e-11,2;UBERON:0000122,6.85e-11,2;UBERON:0003714,8.68e-11,2;UBERON:0000369,1.19e-10,4;UBERON:0002435,1.19e-10,4;UBERON:0000204,1.19e-10,4;UBERON:0010082,1.19e-10,4;UBERON:0001875,2.80e-10,2;UBERON:0006514,2.80e-10,2;UBERON:0001897,6.36e-10,2;UBERON:0010225,6.36e-10,2;UBERON:0000025,9.28e-10,192;UBERON:0002021,6.53e-09,5;UBERON:0001870,6.75e-07,3;UBERON:0005383,7.60e-07,3;UBERON:0005382,7.60e-07,3 | |||
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| ||
|short_description=p2@VAX1 | |||
}} | }} |
Latest revision as of 15:08, 16 September 2015
Short description: | p2@VAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VAX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.12e-08 | 10 |