FFCP PHASE1:Hg19::chr10:129845867..129845888,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:129845867..129845888,+ to FFCP PHASE1:Hg19::chr10:129845867..129845888,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000487428_5end | |||
|cluster_id=chr10:129845867..129845888,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_PTPRE_5end | |||
|id=chr10:129845867..129845888,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.27e-50!140;CL:0000037!7.88e-50!172;CL:0000566!7.88e-50!172;CL:0002032!1.04e-45!165;CL:0000837!1.04e-45!165;CL:0000988!5.16e-45!182;CL:0002087!1.30e-41!119;CL:0002031!6.37e-41!124;CL:0000766!1.59e-36!76;CL:0000763!1.53e-33!112;CL:0000049!1.53e-33!112;CL:0000557!4.50e-32!71;CL:0002009!7.27e-31!65;CL:0002194!3.45e-30!63;CL:0000576!3.45e-30!63;CL:0000040!3.45e-30!63;CL:0000559!3.45e-30!63;CL:0000839!3.48e-30!70;CL:0002057!2.03e-28!42;CL:0000860!2.11e-24!45;CL:0000542!9.08e-11!53;CL:0000051!9.08e-11!53;CL:0000838!1.31e-10!52;CL:0000084!1.71e-08!25;CL:0000827!1.71e-08!25;CL:0000791!3.81e-08!18;CL:0000789!3.81e-08!18;CL:0002420!3.81e-08!18;CL:0002419!3.81e-08!18;CL:0000790!3.81e-08!18;CL:0000094!5.23e-07!8;CL:0002393!8.47e-07!9;CL:0002397!8.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.34e-23;33!CL:0002057;7.34e-23;33!CL:0000473;3.56e-22;39!CL:0000234;3.56e-22;39!CL:0000576;1.05e-20;48!CL:0000766;3.40e-18;69!CL:0002087;3.25e-13;104!CL:0000738;4.14e-12;136!CL:0000763;1.13e-11;100!CL:0000988;4.03e-09;177!CL:0000084;8.22e-09;25!CL:0000791;8.82e-09;18!CL:0000789;8.82e-09;18!CL:0002419;8.82e-09;18!CL:0000094;1.58e-07;8!CL:0000542;5.22e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.56e-56,136;CL:0000037,6.01e-56,168;CL:0002032,2.19e-51,161;CL:0000837,2.19e-51,161;CL:0000988,6.94e-50,177;CL:0002087,5.32e-48,115;CL:0002031,8.67e-47,120;CL:0000766,4.17e-44,72;CL:0000763,3.15e-39,108;CL:0000049,3.15e-39,108;CL:0000557,4.77e-39,67;CL:0002009,2.65e-38,61;CL:0002194,1.34e-37,59;CL:0000576,1.34e-37,59;CL:0000040,1.34e-37,59;CL:0000559,1.34e-37,59;CL:0000839,7.66e-37,66;CL:0000473,1.53e-34,48;CL:0000234,1.53e-34,48;CL:0000860,5.96e-31,42;CL:0002057,5.96e-31,42;CL:0000542,6.26e-11,53;CL:0000051,6.26e-11,53;CL:0000838,9.36e-11,52;CL:0000084,8.98e-09,25;CL:0000827,8.98e-09,25;CL:0000791,9.15e-09,18;CL:0000789,9.15e-09,18;CL:0002420,9.15e-09,18;CL:0002419,9.15e-09,18;CL:0000790,9.15e-09,18;CL:0000094,1.60e-07,8;CL:0002393,2.71e-07,9;CL:0002397,2.71e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-22;42!CL:0000049;2.34e-11;108!CL:0000790;8.82e-09;18!CL:0000051;5.22e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.18e-39!102;UBERON:0003061!3.18e-39!102;UBERON:0002193!2.93e-36!112;UBERON:0002371!1.48e-30!80;UBERON:0001474!3.15e-25!86;UBERON:0002405!3.79e-22!115;UBERON:0004765!5.43e-20!101;UBERON:0001434!5.43e-20!101;UBERON:0007023!9.69e-12!115;UBERON:0003081!5.38e-10!216;UBERON:0000178!9.62e-07!15;UBERON:0000179!9.62e-07!15;UBERON:0000463!9.62e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.03e-45,98;UBERON:0003061,6.03e-45,98;UBERON:0002193,3.61e-41,108;UBERON:0002371,1.38e-36,76;UBERON:0002405,1.74e-35,93;UBERON:0001474,4.57e-31,82;UBERON:0004765,4.70e-29,90;UBERON:0001434,7.07e-23,100;UBERON:0003081,5.14e-12,203;UBERON:0007023,1.34e-10,114 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0,1.52908960491121,1.05506791291381,1.36142988256051,0.994192127183747,2.01697543935533,0,0,0.975865597581014,0,0,0,0,0,0,8.78754166101439,6.32174538764582,4.88006844144811,305.644043111598,200.358945806745,253.124361621784,5.51652734687356,16.2651196140255,14.7901604066715,7.97912165977107,2.13253848731132,29.0664434941499,439.872354374311,501.361118675354,342.877175731046,13.8827594028753,23.3203439533665,15.4545340580512,221.005322944938,198.762746380314,215.657230395969,318.195351523882,306.731244464282,497.078725286641,391.261653558125,400.635345011513,413.134455615358,641.571711850847,635.156928646485,564.728449098405,240.385467595906,209.591923244426,244.049704107362,407.703744638042,452.188999150216,511.469700639233,199.230185312777,217.415386807579,221.210645526468,286.436518526412,278.018760098659,300.200324015867,390.189177143722,408.321125123018,551.008099016881,219.760019455913,397.371569230582,324.057484739466,126.964427073477,149.035614275496,150.954224766031,217.468229899615,257.703548116025,316.147229033157,69.8281222166059,78.7710041708397,79.824235195145,0,6.00752472388345,0,12.8019066769952,4.00395987036012,5.17277195959035,7.27149360063348,3.81621501814146,7.39976859842283,22.3150131960957,6.11637165000366,21.1474125726441,92.4839128919535,18.9636541038055,14.3598132183098,22.4016134767024,9.66327045297693,10.5327492096127,6.19252306603822,8.99550830895993,1.94826728407911,8.24437380950284,13.2572658363677,10.8551608345974,17.873055008491,11.6563100950364,7.41338281091306,12.0039670360684,10.2249506580764,11.302320343667,4.00373720537563,6.68852070224283,2.09071047609954,7.25179793264424,19.9274656672999,10.9960782554442,12.9040042929946,9.5569624297229,9.11516835398986,5.70271226669025,24.2425941715214,20.3498711735525,18.7396089828519,20.3628436757855,11.4957919568947,52.6193599816552,60.1740440512892,42.2887259337773,0,0,0,1.80719576192283,3.00802746381534,3.33146993609895,2.3858578411533,7.29952305453954,0,0,0.790513071238134,6.09052701064364,4.00724817121796,4.07862887062872,240.814166091775,242.040334845981,193.586790515468,226.80458371438,197.910239129924,192.414985688715,1.78886166630035,0.860234595106124,1.04142150482278,3.39184765154406,0.419499436209906,1.37559020970034,1.8809546988313,0.258416759169329,0,0.33472061276467,3.22263453687318,0,6.34561349625241,0,1.62028389576352,0.0892997282840798,0.44905874525234,0.788280363383256,0,0,0,1972.75284901787,1209.87442414278,8.72188104285069,0,0,0,0,1.77334191099179,0,0,1.48000529050296,0.933633106199299,1.21239604862719,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,14.1080422809207,15.2737827530867,12.9062067925052,0,0.265059536642971,0,0.310983165046111,0.504641701751257,0.36497735907583,9.38697193978896,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,3.9313088667105,0.590789906681404,9.71218818712231,0.122988438543114,0,16.2430422404766,6.74410519545717,12.4655925790422,15.8326241221086,0,0,0,0,0.352226082707465,2.45422961193825,2.31492756288305,2.66355813128438,0,0,46.7812311566055,101.791855335568,50.8318575027451,2.81201501960331,8.90305279453955,17.4383369608135,19.7924335173295,20.0537417574634,18.0189859207649,10.8385912337108,0.264145302039678,11.1957182392017,5.6206781832615,13.634182810049,0.126995788584338,0,0,0,0.205654985406647,0,0,1.12131084345361,0.43596006883328,0.7333828582095,0.517086863031111,0,0,0,0,1.54324424557285,2.83698264046557,0.532844358032199,0,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,0.599837947092342,130.137445286074,75.338563714819,96.9836121621945,0,0,0,0,0.205476322550383,0.179060963239896,11.0964292553592,79.4033963613767,74.1758857516739,84.5780609083542,0,0,0,0,0,904.051477904249,756.878491786183,1213.82303885415,1.10422342547226,0,0,0,0,0,0,0.601892199455438,0,1.03473071292505,0,1.84369168541703,0,0.195801157462741,0,126.335263961084,144.097086146836,91.4655170375518,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21316822788541,4.05156351317944,0,0,0,1.35359883872224,0.462092022626489,0,2.92278449306521,1.16106791782163,0,0.170093705276516,1.51141141271498,0,0.541892875087706,0,1.52925763827023,0.831076008928724,0.895499018888713,1.09629938322967,1.0457418040996,0,0,0,7.21287081534056,0,0,7.46545199395024,10.4009639365843,0,0,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.725083469571143,1.27839941124151,0,5.95025695299521,9.03293316615999,39.8151662983102,2.8324178639554,0,0,0,0,0,0,0.37064843820784,0,0.744316738719335,0,0.571890581771475,0,0,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26699946769575,0,0.286822704408103,0.491245205065606,0,0,1.26664581178598,0,0,0,9.33354493437467,10.0545341330368,3.26672954583968,7.15492885903522,4.3050537267123,1.6847147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| ||
|short_description=p1@PTPRE | |||
}} | }} |
Latest revision as of 01:48, 17 September 2015
Short description: | p1@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPRE_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000487428_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.03e-45 | 98 |
blood island | 6.03e-45 | 98 |
hemolymphoid system | 3.61e-41 | 108 |
bone marrow | 1.38e-36 | 76 |
immune system | 1.74e-35 | 93 |
bone element | 4.57e-31 | 82 |
skeletal element | 4.70e-29 | 90 |
skeletal system | 7.07e-23 | 100 |
lateral plate mesoderm | 5.14e-12 | 203 |
adult organism | 1.34e-10 | 114 |