FFCP PHASE1:Hg19::chr10:60042657..60042682,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:60042657..60042682,+ to FFCP PHASE1:Hg19::chr10:60042657..60042682,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55847 | |EntrezGene=55847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30880 | |HGNC=30880 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_uc001jkd.3_5end | |||
|cluster_id=chr10:60042657..60042682,+ | |||
|description=CAGE_peak_3_at_CISD1_5end | |||
|id=chr10:60042657..60042682,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.63e-15!24;CL:0000071!1.04e-11!18;CL:0002546!1.04e-11!18;CL:0000115!1.03e-08!35;CL:0002078!4.06e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002545;6.83e-14;2!CL:0000071;2.19e-12;18!CL:0002539;4.86e-11;10!CL:0002544;3.54e-10;6!CL:0002144;9.71e-10;3!CL:0002139;3.70e-09;24!CL:0000946;1.22e-07;1!CL:0000786;1.22e-07;1!CL:0000569;1.96e-07;4!CL:1000413;6.15e-07;9!CL:0000359;7.24e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,9.17e-14,2;CL:0000071,2.36e-12,18;CL:0002546,2.36e-12,18;CL:0002539,4.87e-11,10;CL:0002544,5.18e-10,6;CL:0002144,8.16e-10,3;CL:0002139,3.90e-09,24;CL:0000946,1.11e-07,1;CL:0000786,1.11e-07,1;CL:0000980,1.11e-07,1;CL:0000569,1.65e-07,4;CL:0000011,1.65e-07,4;CL:0000359,4.93e-07,32;CL:1000413,7.88e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.19e-12;18!CL:0000011;1.96e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.70e-08;1!DOID:0070004;2.70e-08;1!DOID:2355;3.80e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.70e-08,1;DOID:0070004,2.70e-08,1;DOID:2355,3.55e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.79e-12!69;UBERON:0004872!8.56e-12!84;UBERON:0001986!1.04e-11!18;UBERON:0004638!1.04e-11!18;UBERON:0004852!1.04e-11!18;UBERON:0004535!1.09e-10!110;UBERON:0001981!2.65e-10!60;UBERON:0007500!2.65e-10!60;UBERON:0004537!2.65e-10!60;UBERON:0006965!2.65e-10!60;UBERON:0001009!3.86e-10!113;UBERON:0002049!1.90e-09!79;UBERON:0007798!1.90e-09!79;UBERON:0000487!5.41e-09!22;UBERON:0001637!7.39e-08!42;UBERON:0003509!7.39e-08!42;UBERON:0004572!7.39e-08!42;UBERON:0006914!1.52e-07!25;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0003081!2.34e-07!216;UBERON:0000947!6.57e-07!21;UBERON:0010191!6.57e-07!21;UBERON:0003914!9.93e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.29e-15;33!UBERON:0004571;5.29e-15;33!UBERON:0000947;1.39e-14;21!UBERON:0010191;1.39e-14;21!UBERON:0005800;6.83e-14;2!UBERON:0001515;6.83e-14;2!UBERON:0004638;2.19e-12;18!UBERON:0001986;2.19e-12;18!UBERON:0004852;2.19e-12;18!UBERON:0004237;4.86e-11;10!UBERON:0004695;4.86e-11;10!UBERON:0002111;4.86e-11;10!UBERON:0004178;4.86e-11;10!UBERON:0000487;4.86e-10;22!UBERON:0010523;9.71e-10;3!UBERON:0001915;9.71e-10;3!UBERON:0001982;9.71e-10;3!UBERON:0001637;1.88e-09;42!UBERON:0003509;1.88e-09;42!UBERON:0004572;1.88e-09;42!UBERON:0006914;9.03e-09;25!UBERON:0007500;1.55e-07;56!UBERON:0001981;1.55e-07;56!UBERON:0004537;1.55e-07;56!UBERON:0001135;2.19e-07;15!UBERON:0003915;6.15e-07;9!UBERON:0004700;6.15e-07;9!UBERON:0001917;6.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.12e-14,33;UBERON:0004571,1.12e-14,33;UBERON:0004872,1.17e-14,83;UBERON:0000947,1.78e-14,21;UBERON:0010191,1.78e-14,21;UBERON:0005800,9.17e-14,2;UBERON:0001515,9.17e-14,2;UBERON:0007500,1.03e-13,59;UBERON:0001981,1.03e-13,59;UBERON:0004537,1.03e-13,59;UBERON:0006965,1.03e-13,59;UBERON:0004638,2.36e-12,18;UBERON:0001986,2.36e-12,18;UBERON:0004852,2.36e-12,18;UBERON:0000055,1.33e-11,68;UBERON:0001637,3.20e-11,42;UBERON:0003509,3.20e-11,42;UBERON:0004572,3.20e-11,42;UBERON:0003081,4.09e-11,203;UBERON:0004237,4.87e-11,10;UBERON:0004695,4.87e-11,10;UBERON:0002111,4.87e-11,10;UBERON:0004178,4.87e-11,10;UBERON:0004535,1.89e-10,109;UBERON:0001009,4.31e-10,112;UBERON:0000487,5.16e-10,22;UBERON:0002049,7.94e-10,78;UBERON:0007798,7.94e-10,78;UBERON:0010523,8.16e-10,3;UBERON:0001915,8.16e-10,3;UBERON:0001982,8.16e-10,3;UBERON:0003914,1.55e-09,117;UBERON:0006914,9.51e-09,25;UBERON:0000926,4.52e-08,315;UBERON:0004120,4.52e-08,315;UBERON:0006603,4.52e-08,315;UBERON:0001135,2.19e-07,15;UBERON:0003915,7.88e-07,9;UBERON:0004700,7.88e-07,9;UBERON:0001917,7.88e-07,9 | |||
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| ||
|short_description=p3@CISD1 | |||
}} | }} |
Latest revision as of 14:21, 18 September 2015
Short description: | p3@CISD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CISD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_uc001jkd.3_5end |
EntrezGene: | CISD1 |
HGNC: | 30880 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 9.17e-14 | 2 |
blood vessel endothelial cell | 2.36e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-12 | 18 |
aortic smooth muscle cell | 4.87e-11 | 10 |
aortic endothelial cell | 5.18e-10 | 6 |
capillary endothelial cell | 8.16e-10 | 3 |
endothelial cell of vascular tree | 3.90e-09 | 24 |
antibody secreting cell | 1.11e-07 | 1 |
plasma cell | 1.11e-07 | 1 |
plasmablast | 1.11e-07 | 1 |
cardiac mesenchymal cell | 1.65e-07 | 4 |
migratory trunk neural crest cell | 1.65e-07 | 4 |
vascular associated smooth muscle cell | 4.93e-07 | 32 |
endothelial cell of artery | 7.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.70e-08 | 1 |
myeloma | 2.70e-08 | 1 |
anemia | 3.55e-08 | 1 |