FFCP PHASE1:Hg19::chr11:1905203..1905219,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1905203..1905219,+ to FFCP PHASE1:Hg19::chr11:1905203..1905219,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4046 | |EntrezGene=4046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |HGNC=6707 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-398bp_to_ENST00000484895_5end | |||
|cluster_id=chr11:1905203..1905219,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_LSP1_5end | |||
|id=chr11:1905203..1905219,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.83e-64!140;CL:0002087!5.71e-58!119;CL:0000037!1.73e-57!172;CL:0000566!1.73e-57!172;CL:0000988!4.90e-56!182;CL:0002032!6.63e-54!165;CL:0000837!6.63e-54!165;CL:0002031!9.69e-51!124;CL:0002057!1.84e-34!42;CL:0000766!8.23e-33!76;CL:0002009!1.02e-32!65;CL:0002194!1.48e-31!63;CL:0000576!1.48e-31!63;CL:0000040!1.48e-31!63;CL:0000559!1.48e-31!63;CL:0000860!7.83e-31!45;CL:0000763!3.38e-29!112;CL:0000049!3.38e-29!112;CL:0000557!6.07e-28!71;CL:0000839!4.11e-26!70;CL:0000542!1.93e-22!53;CL:0000051!1.93e-22!53;CL:0000838!6.29e-22!52;CL:0002320!4.42e-18!365;CL:0000134!7.66e-17!358;CL:0000219!1.01e-12!390;CL:0000048!1.90e-11!430;CL:0000723!5.88e-11!436;CL:0000945!1.01e-10!24;CL:0000826!1.01e-10!24;CL:0000084!1.56e-10!25;CL:0000827!1.56e-10!25;CL:0000034!3.23e-10!444;CL:0000791!2.13e-09!18;CL:0000789!2.13e-09!18;CL:0002420!2.13e-09!18;CL:0002419!2.13e-09!18;CL:0000790!2.13e-09!18;CL:0002393!1.07e-08!9;CL:0002397!1.07e-08!9;CL:0000451!1.11e-08!10;CL:0000236!1.55e-07!14;CL:0000990!1.67e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.90e-34;39!CL:0000234;1.90e-34;39!CL:0000860;5.88e-34;33!CL:0002057;5.88e-34;33!CL:0000576;4.44e-25;48!CL:0000766;4.39e-21;69!CL:0000738;1.54e-17;136!CL:0002087;6.13e-17;104!CL:0000988;3.39e-12;177!CL:0000763;9.71e-12;100!CL:0000542;4.65e-11;53!CL:0000451;3.05e-10;10!CL:0000219;3.78e-09;193!CL:0000084;6.05e-09;25!CL:0000236;1.13e-08;13!CL:0000990;1.27e-08;8!CL:0002393;1.51e-08;6!CL:0002397;1.51e-08;6!CL:0000791;1.71e-08;18!CL:0000789;1.71e-08;18!CL:0002419;1.71e-08;18!CL:0000235;3.47e-08;6!CL:0000945;1.72e-07;24!CL:0000625;2.57e-07;11!CL:0000094;2.57e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.73e-74,136;CL:0002087,2.15e-66,115;CL:0000037,7.11e-65,168;CL:0000988,7.22e-64,177;CL:0002032,5.51e-61,161;CL:0000837,5.51e-61,161;CL:0002031,1.05e-58,120;CL:0000473,3.72e-55,48;CL:0000234,3.72e-55,48;CL:0000766,8.34e-50,72;CL:0002009,1.11e-48,61;CL:0002194,1.18e-48,59;CL:0000576,1.18e-48,59;CL:0000040,1.18e-48,59;CL:0000559,1.18e-48,59;CL:0000860,3.05e-48,42;CL:0002057,3.05e-48,42;CL:0000557,1.08e-42,67;CL:0000839,1.34e-41,66;CL:0000763,8.43e-41,108;CL:0000049,8.43e-41,108;CL:0002320,3.67e-23,361;CL:0000134,2.72e-22,354;CL:0000219,1.95e-17,386;CL:0000542,3.85e-17,53;CL:0000051,3.85e-17,53;CL:0000838,1.71e-16,52;CL:0000048,5.98e-15,427;CL:0000723,2.73e-14,433;CL:0000034,1.91e-13,441;CL:0002393,4.98e-12,9;CL:0002397,4.98e-12,9;CL:0000451,2.94e-10,10;CL:0000084,4.83e-09,25;CL:0000827,4.83e-09,25;CL:0000791,1.40e-08,18;CL:0000789,1.40e-08,18;CL:0002420,1.40e-08,18;CL:0002419,1.40e-08,18;CL:0000790,1.40e-08,18;CL:0000990,1.57e-08,8;CL:0000235,4.13e-08,6;CL:0000236,6.09e-08,14;CL:0000945,1.70e-07,24;CL:0000826,1.70e-07,24;CL:0000625,2.35e-07,11;CL:0000094,2.41e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-34;42!CL:0000049;3.07e-12;108!CL:0000051;4.65e-11;53!CL:0000790;1.71e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.73e-37!102;UBERON:0003061!7.73e-37!102;UBERON:0002193!7.63e-33!112;UBERON:0002371!3.32e-24!80;UBERON:0001474!2.89e-22!86;UBERON:0004765!5.94e-19!101;UBERON:0001434!5.94e-19!101;UBERON:0002384!1.01e-16!375;UBERON:0002405!1.59e-16!115;UBERON:0002204!5.67e-12!167;UBERON:0000178!1.38e-11!15;UBERON:0000179!1.38e-11!15;UBERON:0000463!1.38e-11!15;UBERON:0003081!2.99e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.14e-13;15!UBERON:0000179;7.14e-13;15!UBERON:0000463;7.14e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.68e-48,98;UBERON:0003061,4.68e-48,98;UBERON:0002193,5.35e-43,108;UBERON:0002371,7.12e-37,76;UBERON:0001474,7.53e-33,82;UBERON:0002405,1.16e-31,93;UBERON:0004765,1.03e-30,90;UBERON:0001434,4.05e-28,100;UBERON:0002384,1.30e-21,371;UBERON:0003081,1.46e-14,203;UBERON:0002204,2.24e-14,167;UBERON:0000178,8.02e-13,15;UBERON:0000179,8.02e-13,15;UBERON:0000463,8.02e-13,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,1.48519623552056,1.65698687863958,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,4.43197753338117,2.54511827294832,2.2826126580967,1.18009283054671,1.53531759238885,0.928896739896456,0,0,0,0.774672005803016,0.995184627411951,1.17440175733939,1.66198622559563,8.62341124121609,5.4252717678963,0,0,0,7.70610665531693,5.29026321164333,7.03493777444667,9.99444858694444,3.28934310417461,4.02618282163635,8.34307937734236,5.89169625016932,7.09446689665756,3.44745680736619,2.5819387343353,10.8341189275473,8.28266293987461,3.82068610080984,6.06753408001728,9.79468455586888,0.320929027076094,8.95071976118658,8.2462825046679,4.78712778291916,7.2458207590558,10.1573233520004,7.94339314567596,4.9825779919646,7.28621129244555,4.69334626578181,6.73285418585862,8.47559303686716,2.57794345191295,4.74693581161327,8.02770087985379,8.2915676986367,7.54771123830153,4.26848798356681,6.90813707070929,1.92870704036496,3.99017841237748,9.15016715115815,4.93193215164512,1.75996244461323,1.09227722252426,1.77901850772711,0.426730222566507,1.20118796110804,4.02326707968138,4.62731410949403,1.90810750907073,3.98449078376614,1.76171156811282,3.05818582500183,0,0,0,0.196709770113833,9.43225830597995,2.87842098599313,2.00623794468814,0.977766799900771,0.473447805734733,5.84480185223734,2.89667187901451,3.82987679717288,3.98761010250518,3.5204502289452,3.71464827204458,2.60118695119756,7.72858151637278,10.5013006758622,2.60822777161547,1.77943875794473,2.67540828089713,2.09071047609954,3.05935225283429,1.53288197440768,4.46715679127419,3.28925599625354,2.86708872891687,1.95325036156926,4.75226022224187,1.50575119077773,1.15187950038977,0,3.55165878066025,0.821127996921047,1.41124720257313,10.9650480271238,4.05508330871837,0,0,0,0.361439152384566,0,0.869079113764942,1.5905718941022,1.94653948121054,0,0,0.087834785693126,0.130979075497713,0,0,2.27183175558278,2.43781632218974,9.83888907839602,2.14641561874808,2.85997455390064,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.185176890317059,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,2.21595305478658,5.14809383306323,6.98566462757023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0,3.57656445851882,0,0,0,0,0,0,0,3.7983512377401,1.64648067356154,0,0,0,0,0,0,4.86495122564762,3.01354254859276,12.6500363689819,0,0,0,1.44781306667579,5.13690806375959,0.179060963239896,0.112085143993527,0.985153801009636,10.5657511681163,4.36366323351144,0,0,0,0,0,19.4741826226267,107.698125313449,5.38740167466846,0.49076596687656,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,2.74514739048685,0.82707210449155,17.472850266308,5.76328812138599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.676695028044854,0.770243085573222,1.5350367472613,0.964856007391714,0.214840489736547,1.16013355131383,0.852266274161009,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,2.11107635297664,2.30506425071931,0.379473173765715,4.89908608342976,0,0,0,0,0,0,0,0,4.56702848308952,3.82318603571188,17.0894156152249,1.90585420366231,4.52498500394814,5.18778648954174,4.32025149790492,20.621254583651,0,0,0,1.85803175125719,0,0,0,3.99158742865633,0.957526850661834,1.69338866179106,0,1.12318871245384,0.228234679033192,0.626719583092093,0,1.18504244461122,0.642352300414798,0,2.12923118845163,1.03051603426729,0,0,0.166849141711909,1.56310476321632,0,0,0,0,0,0,0.586032717087576,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.597743964753209,2.21027132424918,0,0,0.738508832766417,0,0,0,0,0.591860433821602,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,7.15353087370155,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0.889563386041866,1.35920332841153,1.04421949505455,0.134802265961354,0.802577647298789,0,8.75782988235197,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57218385698286,0.279282401272254,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0.899895566206002,4.6428117273477,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.427149650270779,0,3.31391244277756,3.96932817449561,2.56895121467328,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.24996081592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| ||
|short_description=p5@LSP1 | |||
}} | }} |
Latest revision as of 04:17, 17 September 2015
Short description: | p5@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LSP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -398bp_to_ENST00000484895_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.68e-48 | 98 |
blood island | 4.68e-48 | 98 |
hemolymphoid system | 5.35e-43 | 108 |
bone marrow | 7.12e-37 | 76 |
bone element | 7.53e-33 | 82 |
immune system | 1.16e-31 | 93 |
skeletal element | 1.03e-30 | 90 |
skeletal system | 4.05e-28 | 100 |
connective tissue | 1.30e-21 | 371 |
lateral plate mesoderm | 1.46e-14 | 203 |
musculoskeletal system | 2.24e-14 | 167 |
blood | 8.02e-13 | 15 |
haemolymphatic fluid | 8.02e-13 | 15 |
organism substance | 8.02e-13 | 15 |