FFCP PHASE1:Hg19::chr17:11144580..11144595,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:11144580..11144595,+ to FFCP PHASE1:Hg19::chr17:11144580..11144595,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388336 | |EntrezGene=388336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34491 | |HGNC=34491 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSJ9 | |UniProt=Q6ZSJ9 | ||
|association_with_transcript=0bp_to_ENST00000432116,ENST00000441885_5end | |||
|cluster_id=chr17:11144580..11144595,+ | |||
|coexpression_cluster_id=C1014 | |||
|description=CAGE_peak_2_at_SHISA6_5end | |||
|id=chr17:11144580..11144595,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.58e-25;3!UBERON:0003057;4.58e-25;3!UBERON:0006601;1.73e-07;82!UBERON:0006215;2.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-56!57;UBERON:0005068!2.97e-56!57;UBERON:0006241!2.97e-56!57;UBERON:0007135!2.97e-56!57;UBERON:0001017!1.69e-54!82;UBERON:0005743!1.92e-51!86;UBERON:0007023!1.03e-50!115;UBERON:0000073!3.99e-50!94;UBERON:0001016!3.99e-50!94;UBERON:0002616!1.82e-44!59;UBERON:0002020!1.59e-42!34;UBERON:0003528!1.59e-42!34;UBERON:0001893!5.42e-42!34;UBERON:0000955!5.35e-41!69;UBERON:0006238!5.35e-41!69;UBERON:0002346!3.25e-40!90;UBERON:0002791!8.44e-40!33;UBERON:0003075!5.30e-38!86;UBERON:0007284!5.30e-38!86;UBERON:0001869!6.46e-38!32;UBERON:0002780!7.68e-37!41;UBERON:0001890!7.68e-37!41;UBERON:0006240!7.68e-37!41;UBERON:0003080!8.33e-36!42;UBERON:0002619!8.51e-31!22;UBERON:0000956!1.10e-26!25;UBERON:0000203!1.10e-26!25;UBERON:0001950!4.66e-26!20;UBERON:0000924!1.97e-24!173;UBERON:0006601!1.97e-24!173;UBERON:0004121!1.14e-22!169;UBERON:0003056!1.58e-22!61;UBERON:0003076!1.05e-21!15;UBERON:0003057!1.05e-21!15;UBERON:0000033!3.07e-20!123;UBERON:0000153!4.36e-20!129;UBERON:0007811!4.36e-20!129;UBERON:0002308!5.52e-18!9;UBERON:0000125!5.52e-18!9;UBERON:0002420!1.07e-17!9;UBERON:0007245!1.07e-17!9;UBERON:0010009!1.07e-17!9;UBERON:0010011!1.07e-17!9;UBERON:0000454!1.07e-17!9;UBERON:0002298!5.83e-17!8;UBERON:0001871!5.04e-16!7;UBERON:0004733!1.12e-14!12;UBERON:0002028!1.12e-14!12;UBERON:0007277!1.12e-14!12;UBERON:0000349!2.43e-14!5;UBERON:0000025!1.01e-13!194;UBERON:0004732!2.04e-13!13;UBERON:0009663!8.50e-13!7;UBERON:0000200!2.55e-11!6;UBERON:0004111!2.05e-10!241;UBERON:0000988!1.11e-09!3;UBERON:0001896!1.18e-09!3;UBERON:0005290!1.18e-09!3;UBERON:0010096!1.18e-09!3;UBERON:0002240!1.79e-09!3;UBERON:0006331!4.65e-09!3;UBERON:0002771!7.34e-09!3;UBERON:0006947!1.21e-08!3;UBERON:0004054!1.21e-08!3;UBERON:0000064!1.68e-08!219;UBERON:0000477!2.63e-08!286;UBERON:0000922!2.64e-08!612;UBERON:0002680!4.61e-08!9;UBERON:0001895!4.61e-08!9;UBERON:0010092!4.61e-08!9;UBERON:0000483!6.15e-08!309;UBERON:0003135!9.12e-08!11;UBERON:0000119!9.36e-08!312;UBERON:0002148!4.24e-07!2;UBERON:0009662!4.24e-07!2;UBERON:0000475!5.91e-07!365;UBERON:0001954!7.06e-07!2;UBERON:0003022!7.06e-07!2;UBERON:0002421!7.06e-07!2;UBERON:0002600!7.06e-07!2;UBERON:0001876!9.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.56e-48;6!UBERON:0004733;1.18e-37;12!UBERON:0002028;1.18e-37;12!UBERON:0002148;5.18e-37;2!UBERON:0006331;5.18e-37;2!UBERON:0009662;5.18e-37;2!UBERON:0004732;8.78e-35;13!UBERON:0001896;2.81e-25;3!UBERON:0005290;2.81e-25;3!UBERON:0000988;4.58e-25;3!UBERON:0002240;4.58e-25;3!UBERON:0005174;4.58e-25;3!UBERON:0001137;4.58e-25;3!UBERON:0002902;3.56e-19;1!UBERON:0009899;3.56e-19;1!UBERON:0002680;1.17e-18;9!UBERON:0001895;1.17e-18;9!UBERON:0000349;2.17e-15;5!UBERON:0000073;2.19e-13;53!UBERON:0002616;2.19e-13;53!UBERON:0001876;1.97e-10;2!UBERON:0003528;2.56e-10;34!UBERON:0002020;2.56e-10;34!UBERON:0001954;2.85e-10;2!UBERON:0003022;2.85e-10;2!UBERON:0002421;2.85e-10;2!UBERON:0002600;2.85e-10;2!UBERON:0000955;3.93e-10;68!UBERON:0000125;5.10e-09;9!UBERON:0002308;5.10e-09;9!UBERON:0001016;6.29e-08;83!UBERON:0002619;1.18e-07;22!UBERON:0001017;2.07e-07;75!UBERON:0000956;7.80e-07;25!UBERON:0000203;7.80e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.69e-58,15;UBERON:0003057,1.69e-58,15;UBERON:0002298,1.08e-48,6;UBERON:0004733,1.05e-37,12;UBERON:0002028,1.05e-37,12;UBERON:0007277,1.05e-37,12;UBERON:0002148,3.28e-37,2;UBERON:0006331,3.28e-37,2;UBERON:0009662,3.28e-37,2;UBERON:0004732,7.91e-35,13;UBERON:0001049,5.38e-31,56;UBERON:0005068,5.38e-31,56;UBERON:0006241,5.38e-31,56;UBERON:0007135,5.38e-31,56;UBERON:0001896,2.64e-25,3;UBERON:0005290,2.64e-25,3;UBERON:0010096,2.64e-25,3;UBERON:0000988,3.38e-25,3;UBERON:0002240,4.31e-25,3;UBERON:0005174,4.31e-25,3;UBERON:0001137,4.31e-25,3;UBERON:0001017,3.91e-21,81;UBERON:0003075,3.91e-21,82;UBERON:0007284,3.91e-21,82;UBERON:0000073,6.13e-21,53;UBERON:0002616,6.13e-21,53;UBERON:0002346,3.87e-20,86;UBERON:0002902,3.91e-19,1;UBERON:0009899,3.91e-19,1;UBERON:0001016,5.16e-19,89;UBERON:0002680,1.10e-18,9;UBERON:0001895,1.10e-18,9;UBERON:0010092,1.10e-18,9;UBERON:0010371,1.37e-16,104;UBERON:0000955,4.58e-16,68;UBERON:0006238,4.58e-16,68;UBERON:0000349,2.02e-15,5;UBERON:0003528,5.31e-13,34;UBERON:0002020,5.31e-13,34;UBERON:0010314,5.78e-13,132;UBERON:0007023,2.71e-12,114;UBERON:0001876,1.89e-10,2;UBERON:0001954,2.72e-10,2;UBERON:0003022,2.72e-10,2;UBERON:0002421,2.72e-10,2;UBERON:0002600,2.72e-10,2;UBERON:0004121,9.58e-10,171;UBERON:0000924,9.58e-10,171;UBERON:0006601,9.58e-10,171;UBERON:0000125,4.61e-09,9;UBERON:0002308,4.61e-09,9;UBERON:0000025,1.04e-08,192;UBERON:0002619,1.16e-07,22;UBERON:0011216,2.76e-07,223;UBERON:0000956,7.72e-07,25;UBERON:0000203,7.72e-07,25;UBERON:0004111,8.17e-07,240 | |||
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| ||
|short_description=p2@SHISA6 | |||
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Latest revision as of 15:54, 18 September 2015
Short description: | p2@SHISA6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHISA6_5end |
Coexpression cluster: | C1014_hippocampus_locus_spinal_medulla_neuroectodermal_cerebellum_thalamus |
Association with transcript: | 0bp_to_ENST00000432116, ENST00000441885_5end |
EntrezGene: | SHISA6 |
HGNC: | 34491 |
UniProt: | Q6ZSJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data