FFCP PHASE1:Hg19::chr19:1026566..1026648,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:1026566..1026648,+ to FFCP PHASE1:Hg19::chr19:1026566..1026648,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1265 | |EntrezGene=1265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2156 | |HGNC=2156 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENR3 | |UniProt=E7ENR3 | ||
|association_with_transcript=0bp_to_ENST00000442531_5end | |||
|cluster_id=chr19:1026566..1026648,+ | |||
|coexpression_cluster_id=C2443 | |||
|description=CAGE_peak_1_at_CNN2_5end | |||
|id=chr19:1026566..1026648,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.33e-41!591;CL:0000144!1.54e-41!625;CL:0000003!5.65e-34!722;CL:0000548!2.34e-31!679;CL:0000004!2.34e-31!679;CL:0000255!2.34e-31!679;CL:0000012!9.68e-31!682;CL:0000055!5.05e-23!180;CL:0000183!5.38e-17!59;CL:0000222!3.91e-16!119;CL:0000187!5.65e-15!54;CL:0000034!9.21e-15!444;CL:0002321!1.15e-14!248;CL:0000192!1.34e-14!42;CL:0000514!1.34e-14!42;CL:0000680!1.41e-14!57;CL:0000056!1.41e-14!57;CL:0000355!1.41e-14!57;CL:0000723!2.45e-14!436;CL:0000220!2.76e-14!246;CL:0000048!4.63e-14!430;CL:0000393!8.40e-14!60;CL:0000211!8.40e-14!60;CL:0000359!4.18e-11!32;CL:0000063!2.32e-09!578;CL:0000057!5.69e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.54e-10;43!CL:0000359;1.93e-10;32!CL:0000187;1.22e-08;55!CL:0000393;1.84e-07;61!CL:0000211;1.84e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.43e-16,121;CL:0000034,1.48e-15,441;CL:0000187,3.22e-15,55;CL:0000723,4.02e-15,433;CL:0002321,6.68e-15,250;CL:0000048,7.74e-15,427;CL:0000192,7.82e-15,43;CL:0000514,7.82e-15,43;CL:0000680,8.05e-15,58;CL:0000056,8.05e-15,58;CL:0000355,8.05e-15,58;CL:0000393,4.79e-14,61;CL:0000211,4.79e-14,61;CL:0000359,4.18e-11,32;CL:0000057,3.27e-09,76;CL:0002320,5.55e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-10;43!CL:0000355;3.40e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.61e-15!110;UBERON:0002049!1.62e-14!79;UBERON:0007798!1.62e-14!79;UBERON:0000486!4.18e-14!82;UBERON:0000914!1.11e-13!83;UBERON:0002329!1.11e-13!83;UBERON:0003077!1.11e-13!83;UBERON:0003059!1.11e-13!83;UBERON:0007282!1.11e-13!83;UBERON:0009618!1.11e-13!83;UBERON:0007285!1.11e-13!83;UBERON:0001009!1.51e-13!113;UBERON:0005256!5.23e-13!143;UBERON:0004290!5.70e-12!70;UBERON:0001134!1.13e-11!61;UBERON:0002036!1.13e-11!61;UBERON:0003082!1.13e-11!61;UBERON:0000490!9.02e-11!138;UBERON:0002385!1.29e-10!63;UBERON:0001015!1.29e-10!63;UBERON:0000383!1.29e-10!63;UBERON:0001981!3.43e-10!60;UBERON:0007500!3.43e-10!60;UBERON:0004537!3.43e-10!60;UBERON:0006965!3.43e-10!60;UBERON:0001637!5.55e-10!42;UBERON:0003509!5.55e-10!42;UBERON:0004572!5.55e-10!42;UBERON:0000055!6.35e-10!69;UBERON:0005085!3.96e-09!29;UBERON:0003914!4.10e-09!118;UBERON:0004872!1.71e-08!84;UBERON:0002100!1.93e-07!216;UBERON:0004573!6.08e-07!33;UBERON:0004571!6.08e-07!33;UBERON:0001801!7.28e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.71e-07;74!UBERON:0001637;3.86e-07;42!UBERON:0003509;3.86e-07;42!UBERON:0004572;3.86e-07;42!UBERON:0007500;4.08e-07;56!UBERON:0001981;4.08e-07;56!UBERON:0004537;4.08e-07;56!UBERON:0001801;7.28e-07;14!UBERON:0002049;8.69e-07;75!UBERON:0007798;8.69e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.40e-14,109;UBERON:0007503,1.93e-14,78;UBERON:0000486,2.40e-14,83;UBERON:0002049,3.05e-14,78;UBERON:0007798,3.05e-14,78;UBERON:0001009,2.73e-13,112;UBERON:0002329,3.31e-12,71;UBERON:0003059,3.31e-12,71;UBERON:0007282,3.31e-12,71;UBERON:0004290,3.31e-12,71;UBERON:0009618,3.31e-12,71;UBERON:0001134,6.52e-12,62;UBERON:0002036,6.52e-12,62;UBERON:0003082,6.52e-12,62;UBERON:0007524,7.72e-12,73;UBERON:0000490,1.40e-11,148;UBERON:0003077,1.77e-11,72;UBERON:0007285,1.77e-11,72;UBERON:0002385,7.58e-11,64;UBERON:0001015,7.58e-11,64;UBERON:0000383,7.58e-11,64;UBERON:0001637,5.55e-10,42;UBERON:0003509,5.55e-10,42;UBERON:0004572,5.55e-10,42;UBERON:0007500,6.24e-10,59;UBERON:0001981,6.24e-10,59;UBERON:0004537,6.24e-10,59;UBERON:0006965,6.24e-10,59;UBERON:0005256,9.20e-10,122;UBERON:0003104,9.84e-10,160;UBERON:0009142,9.84e-10,160;UBERON:0000055,1.14e-09,68;UBERON:0003914,6.45e-09,117;UBERON:0005085,9.95e-09,31;UBERON:0004872,2.90e-08,83;UBERON:0000926,1.44e-07,315;UBERON:0004120,1.44e-07,315;UBERON:0006603,1.44e-07,315;UBERON:0004573,6.08e-07,33;UBERON:0004571,6.08e-07,33;UBERON:0001801,7.28e-07,14 | |||
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28243398 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|short_description=p1@CNN2 | |||
}} | }} |
Latest revision as of 23:42, 24 September 2015
Short description: | p1@CNN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNN2_5end |
Coexpression cluster: | C2443_Mesenchymal_Hepatic_Alveolar_Smooth_Astrocyte_Renal_Hair |
Association with transcript: | 0bp_to_ENST00000442531_5end |
EntrezGene: | CNN2 |
HGNC: | 2156 |
UniProt: | E7ENR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.43e-16 | 121 |
stem cell | 1.48e-15 | 441 |
muscle cell | 3.22e-15 | 55 |
somatic stem cell | 4.02e-15 | 433 |
embryonic cell | 6.68e-15 | 250 |
multi fate stem cell | 7.74e-15 | 427 |
smooth muscle cell | 7.82e-15 | 43 |
smooth muscle myoblast | 7.82e-15 | 43 |
muscle precursor cell | 8.05e-15 | 58 |
myoblast | 8.05e-15 | 58 |
multi-potent skeletal muscle stem cell | 8.05e-15 | 58 |
electrically responsive cell | 4.79e-14 | 61 |
electrically active cell | 4.79e-14 | 61 |
vascular associated smooth muscle cell | 4.18e-11 | 32 |
fibroblast | 3.27e-09 | 76 |
connective tissue cell | 5.55e-07 | 361 |