FFCP PHASE1:Hg19::chr19:19843900..19843928,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:19843900..19843928,- to FFCP PHASE1:Hg19::chr19:19843900..19843928,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7561 | |EntrezGene=7561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12924 | |HGNC=12924 | ||
|TSSclassifier=strong | |||
|UniProt=P17017 | |UniProt=P17017 | ||
|association_with_transcript=0bp_to_ENST00000344099,NM_021030,uc002nnk.1_5end | |||
|cluster_id=chr19:19843900..19843928,- | |||
|coexpression_cluster_id=C867 | |||
|description=CAGE_peak_1_at_ZNF14_5end | |||
|id=chr19:19843900..19843928,- | |||
|ontology_enrichment_celltype=CL:0000542!1.21e-14!53;CL:0000051!1.21e-14!53;CL:0000838!1.56e-14!52;CL:0000791!5.09e-12!18;CL:0000789!5.09e-12!18;CL:0002420!5.09e-12!18;CL:0002419!5.09e-12!18;CL:0000790!5.09e-12!18;CL:0000084!1.10e-08!25;CL:0000827!1.10e-08!25;CL:0000625!2.48e-08!11;CL:0000738!1.02e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.21e-12;18!CL:0000789;3.21e-12;18!CL:0002419;3.21e-12;18!CL:0000542;6.45e-09;53!CL:0000084;8.17e-09;25!CL:0000625;2.02e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.11e-14,53;CL:0000051,1.11e-14,53;CL:0000838,1.43e-14,52;CL:0000791,4.95e-12,18;CL:0000789,4.95e-12,18;CL:0002420,4.95e-12,18;CL:0002419,4.95e-12,18;CL:0000790,4.95e-12,18;CL:0000084,1.17e-08,25;CL:0000827,1.17e-08,25;CL:0000625,2.44e-08,11;CL:0000738,3.37e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.21e-12;18!CL:0000051;6.45e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.45e-30!115;UBERON:0001049!1.73e-16!57;UBERON:0005068!1.73e-16!57;UBERON:0006241!1.73e-16!57;UBERON:0007135!1.73e-16!57;UBERON:0001017!1.90e-16!82;UBERON:0005743!9.73e-16!86;UBERON:0000073!4.05e-15!94;UBERON:0001016!4.05e-15!94;UBERON:0003080!1.74e-14!42;UBERON:0002780!4.18e-14!41;UBERON:0001890!4.18e-14!41;UBERON:0006240!4.18e-14!41;UBERON:0000955!6.02e-13!69;UBERON:0006238!6.02e-13!69;UBERON:0002616!7.36e-13!59;UBERON:0001893!1.28e-11!34;UBERON:0002020!1.30e-11!34;UBERON:0003528!1.30e-11!34;UBERON:0002791!2.91e-11!33;UBERON:0002346!3.48e-11!90;UBERON:0003075!7.00e-11!86;UBERON:0007284!7.00e-11!86;UBERON:0001869!1.04e-10!32;UBERON:0002619!8.97e-09!22;UBERON:0001950!3.74e-08!20;UBERON:0000956!4.85e-08!25;UBERON:0000203!4.85e-08!25;UBERON:0003056!5.69e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.05e-10;41!UBERON:0001890;1.05e-10;41!UBERON:0002791;4.80e-10;32!UBERON:0003528;4.92e-10;34!UBERON:0002020;4.92e-10;34!UBERON:0001893;5.10e-10;34!UBERON:0001869;7.83e-10;32!UBERON:0000073;1.56e-09;53!UBERON:0002616;1.56e-09;53!UBERON:0002619;1.13e-08;22!UBERON:0007023;1.74e-08;114!UBERON:0000956;4.43e-08;25!UBERON:0000203;4.43e-08;25!UBERON:0001950;4.84e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.35e-29,114;UBERON:0001049,4.25e-16,56;UBERON:0005068,4.25e-16,56;UBERON:0006241,4.25e-16,56;UBERON:0007135,4.25e-16,56;UBERON:0001017,4.90e-16,81;UBERON:0001016,2.46e-15,89;UBERON:0000073,4.25e-15,53;UBERON:0002616,4.25e-15,53;UBERON:0002780,4.03e-14,41;UBERON:0001890,4.03e-14,41;UBERON:0003080,4.03e-14,41;UBERON:0006240,4.03e-14,41;UBERON:0000955,1.50e-12,68;UBERON:0006238,1.50e-12,68;UBERON:0001893,1.24e-11,34;UBERON:0003528,1.26e-11,34;UBERON:0002020,1.26e-11,34;UBERON:0002791,6.84e-11,32;UBERON:0001869,1.01e-10,32;UBERON:0002346,4.67e-10,86;UBERON:0003075,9.40e-10,82;UBERON:0007284,9.40e-10,82;UBERON:0002619,8.79e-09,22;UBERON:0001950,3.67e-08,20;UBERON:0000956,4.76e-08,25;UBERON:0000203,4.76e-08,25;UBERON:0003056,6.08e-08,61 | |||
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| ||
|short_description=p1@ZNF14 | |||
}} | }} |
Latest revision as of 20:39, 16 September 2015
Short description: | p1@ZNF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF14_5end |
Coexpression cluster: | C867_CD4_CD8_Natural_CD19_Peripheral_cerebellum_Mast |
Association with transcript: | 0bp_to_ENST00000344099, NM_021030, uc002nnk.1_5end |
EntrezGene: | ZNF14 |
HGNC: | 12924 |
UniProt: | P17017 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.11e-14 | 53 |
common lymphoid progenitor | 1.11e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.43e-14 | 52 |
mature alpha-beta T cell | 4.95e-12 | 18 |
alpha-beta T cell | 4.95e-12 | 18 |
immature T cell | 4.95e-12 | 18 |
mature T cell | 4.95e-12 | 18 |
immature alpha-beta T cell | 4.95e-12 | 18 |
T cell | 1.17e-08 | 25 |
pro-T cell | 1.17e-08 | 25 |
CD8-positive, alpha-beta T cell | 2.44e-08 | 11 |
leukocyte | 3.37e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.35e-29 | 114 |
neural tube | 4.25e-16 | 56 |
neural rod | 4.25e-16 | 56 |
future spinal cord | 4.25e-16 | 56 |
neural keel | 4.25e-16 | 56 |
central nervous system | 4.90e-16 | 81 |
nervous system | 2.46e-15 | 89 |
regional part of nervous system | 4.25e-15 | 53 |
regional part of brain | 4.25e-15 | 53 |
regional part of forebrain | 4.03e-14 | 41 |
forebrain | 4.03e-14 | 41 |
anterior neural tube | 4.03e-14 | 41 |
future forebrain | 4.03e-14 | 41 |
brain | 1.50e-12 | 68 |
future brain | 1.50e-12 | 68 |
telencephalon | 1.24e-11 | 34 |
brain grey matter | 1.26e-11 | 34 |
gray matter | 1.26e-11 | 34 |
regional part of telencephalon | 6.84e-11 | 32 |
cerebral hemisphere | 1.01e-10 | 32 |
neurectoderm | 4.67e-10 | 86 |
neural plate | 9.40e-10 | 82 |
presumptive neural plate | 9.40e-10 | 82 |
regional part of cerebral cortex | 8.79e-09 | 22 |
neocortex | 3.67e-08 | 20 |
cerebral cortex | 4.76e-08 | 25 |
pallium | 4.76e-08 | 25 |
pre-chordal neural plate | 6.08e-08 | 61 |