FFCP PHASE1:Hg19::chr1:153362906..153362947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6279 | |EntrezGene=6279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10498 | |HGNC=10498 | ||
|TSSclassifier=strong | |||
|UniProt=P05109 | |UniProt=P05109 | ||
|association_with_transcript=63bp_to_BT007378,CR407674_5end | |||
|cluster_id=chr1:153362906..153362947,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_S100A8_5end | |||
|id=chr1:153362906..153362947,- | |||
|ontology_enrichment_celltype=CL:0002057!1.91e-52!42;CL:0000860!6.02e-48!45;CL:0000766!4.96e-45!76;CL:0002194!9.20e-42!63;CL:0000576!9.20e-42!63;CL:0000040!9.20e-42!63;CL:0000559!9.20e-42!63;CL:0002009!5.45e-40!65;CL:0000839!5.25e-36!70;CL:0000557!2.81e-35!71;CL:0000763!2.51e-28!112;CL:0000049!2.51e-28!112;CL:0000738!3.41e-27!140;CL:0002087!5.19e-26!119;CL:0000037!5.57e-21!172;CL:0000566!5.57e-21!172;CL:0002031!8.31e-21!124;CL:0002032!9.12e-20!165;CL:0000837!9.12e-20!165;CL:0000988!9.87e-19!182;CL:0000094!7.12e-09!8;CL:0002393!5.38e-07!9;CL:0002397!5.38e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-71;33!CL:0002057;1.53e-71;33!CL:0000473;7.49e-60;39!CL:0000234;7.49e-60;39!CL:0000576;2.53e-41;48!CL:0000766;1.54e-29;69!CL:0000763;1.08e-12;100!CL:0002087;4.98e-10;104!CL:0000775;1.76e-09;3!CL:0000738;7.74e-09;136!CL:0000226;5.82e-08;3!CL:0000842;5.82e-08;3!CL:0000622;1.28e-07;5!CL:0002623;1.29e-07;3!CL:0002393;8.77e-07;6!CL:0002397;8.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.69e-76,48;CL:0000234,1.69e-76,48;CL:0000860,3.50e-76,42;CL:0002057,3.50e-76,42;CL:0002194,7.59e-59,59;CL:0000576,7.59e-59,59;CL:0000040,7.59e-59,59;CL:0000559,7.59e-59,59;CL:0000766,5.16e-58,72;CL:0002009,1.43e-56,61;CL:0000839,1.78e-51,66;CL:0000557,1.51e-50,67;CL:0000763,1.04e-34,108;CL:0000049,1.04e-34,108;CL:0002087,1.24e-29,115;CL:0000738,1.61e-29,136;CL:0002031,1.99e-23,120;CL:0000037,1.62e-21,168;CL:0000988,8.52e-20,177;CL:0002032,2.15e-19,161;CL:0000837,2.15e-19,161;CL:0000775,1.74e-09,3;CL:0000226,6.83e-08,3;CL:0000842,6.83e-08,3;CL:0002623,9.83e-08,3;CL:0000622,1.07e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-54;42!CL:0000049;2.71e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.16e-43!102;UBERON:0003061!9.16e-43!102;UBERON:0002193!3.45e-40!112;UBERON:0002371!1.49e-29!80;UBERON:0001474!2.03e-26!86;UBERON:0004765!2.40e-22!101;UBERON:0001434!2.40e-22!101;UBERON:0002405!8.10e-22!115;UBERON:0003081!3.32e-13!216;UBERON:0000178!3.74e-13!15;UBERON:0000179!3.74e-13!15;UBERON:0000463!3.74e-13!15;UBERON:0002204!3.45e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-18;15!UBERON:0000179;1.25e-18;15!UBERON:0000463;1.25e-18;15!UBERON:0002390;3.46e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.72e-55,98;UBERON:0003061,2.72e-55,98;UBERON:0002193,2.72e-53,108;UBERON:0002371,2.77e-43,76;UBERON:0001474,2.54e-39,82;UBERON:0002405,3.22e-37,93;UBERON:0004765,7.41e-35,90;UBERON:0001434,2.79e-30,100;UBERON:0003081,5.63e-22,203;UBERON:0000178,1.49e-18,15;UBERON:0000179,1.49e-18,15;UBERON:0000463,1.49e-18,15;UBERON:0002204,8.84e-15,167;UBERON:0000926,1.04e-10,315;UBERON:0004120,1.04e-10,315;UBERON:0006603,1.04e-10,315 | |||
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| ||
|short_description=p3@S100A8 | |||
}} | }} |
Latest revision as of 05:17, 17 September 2015
Short description: | p3@S100A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A8_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 63bp_to_BT007378, CR407674_5end |
EntrezGene: | S100A8 |
HGNC: | 10498 |
UniProt: | P05109 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.69e-76 | 48 |
phagocyte | 1.69e-76 | 48 |
classical monocyte | 3.50e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.50e-76 | 42 |
monopoietic cell | 7.59e-59 | 59 |
monocyte | 7.59e-59 | 59 |
monoblast | 7.59e-59 | 59 |
promonocyte | 7.59e-59 | 59 |
myeloid leukocyte | 5.16e-58 | 72 |
macrophage dendritic cell progenitor | 1.43e-56 | 61 |
myeloid lineage restricted progenitor cell | 1.78e-51 | 66 |
granulocyte monocyte progenitor cell | 1.51e-50 | 67 |
myeloid cell | 1.04e-34 | 108 |
common myeloid progenitor | 1.04e-34 | 108 |
nongranular leukocyte | 1.24e-29 | 115 |
leukocyte | 1.61e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 1.99e-23 | 120 |
hematopoietic stem cell | 1.62e-21 | 168 |
hematopoietic cell | 8.52e-20 | 177 |
hematopoietic oligopotent progenitor cell | 2.15e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-19 | 161 |
neutrophil | 1.74e-09 | 3 |
single nucleate cell | 6.83e-08 | 3 |
mononuclear cell | 6.83e-08 | 3 |
acinar cell of salivary gland | 9.83e-08 | 3 |
acinar cell | 1.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.72e-55 | 98 |
blood island | 2.72e-55 | 98 |
hemolymphoid system | 2.72e-53 | 108 |
bone marrow | 2.77e-43 | 76 |
bone element | 2.54e-39 | 82 |
immune system | 3.22e-37 | 93 |
skeletal element | 7.41e-35 | 90 |
skeletal system | 2.79e-30 | 100 |
lateral plate mesoderm | 5.63e-22 | 203 |
blood | 1.49e-18 | 15 |
haemolymphatic fluid | 1.49e-18 | 15 |
organism substance | 1.49e-18 | 15 |
musculoskeletal system | 8.84e-15 | 167 |
mesoderm | 1.04e-10 | 315 |
mesoderm-derived structure | 1.04e-10 | 315 |
presumptive mesoderm | 1.04e-10 | 315 |