FFCP PHASE1:Hg19::chr1:78354243..78354293,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:78354243..78354293,+ to FFCP PHASE1:Hg19::chr1:78354243..78354293,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQF0 | |UniProt=E7EQF0 | ||
|association_with_transcript=0bp_to_ENST00000294624_5end | |||
|cluster_id=chr1:78354243..78354293,+ | |||
|coexpression_cluster_id=C933 | |||
|description=CAGE_peak_2_at_NEXN_5end | |||
|id=chr1:78354243..78354293,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.14e-32!180;CL:0000057!1.65e-20!75;CL:0000680!1.09e-16!57;CL:0000056!1.09e-16!57;CL:0000355!1.09e-16!57;CL:0000187!3.89e-15!54;CL:0000183!3.46e-14!59;CL:0000393!1.25e-13!60;CL:0000211!1.25e-13!60;CL:0000222!1.48e-12!119;CL:0000192!1.66e-10!42;CL:0000514!1.66e-10!42;CL:0002620!1.86e-08!23;CL:0000359!3.79e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000187;5.05e-10;55!CL:0002620;6.05e-09;23!CL:0000192;8.96e-09;43!CL:0000057;9.35e-09;73!CL:0000393;8.52e-08;61!CL:0000211;8.52e-08;61!CL:0000359;3.06e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.31e-22,76;CL:0000680,1.19e-18,58;CL:0000056,1.19e-18,58;CL:0000355,1.19e-18,58;CL:0000187,5.96e-17,55;CL:0000393,5.06e-14,61;CL:0000211,5.06e-14,61;CL:0000222,4.69e-12,121;CL:0000192,6.97e-12,43;CL:0000514,6.97e-12,43;CL:0002620,4.69e-09,23;CL:0000359,1.24e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;2.79e-10;58!CL:0000514;8.96e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.16e-23!83;UBERON:0002329!3.16e-23!83;UBERON:0003077!3.16e-23!83;UBERON:0003059!3.16e-23!83;UBERON:0007282!3.16e-23!83;UBERON:0009618!3.16e-23!83;UBERON:0007285!3.16e-23!83;UBERON:0002385!1.30e-19!63;UBERON:0001015!1.30e-19!63;UBERON:0000383!1.30e-19!63;UBERON:0004290!1.89e-19!70;UBERON:0005256!4.24e-19!143;UBERON:0001134!6.49e-19!61;UBERON:0002036!6.49e-19!61;UBERON:0003082!6.49e-19!61;UBERON:0000475!5.25e-18!365;UBERON:0000486!6.06e-18!82;UBERON:0000481!1.07e-16!347;UBERON:0002100!1.84e-15!216;UBERON:0000468!2.37e-15!659;UBERON:0003104!6.66e-15!238;UBERON:0009142!6.66e-15!238;UBERON:0001009!5.42e-13!113;UBERON:0003102!1.01e-12!95;UBERON:0000467!1.51e-12!625;UBERON:0000480!2.66e-12!626;UBERON:0004535!9.51e-12!110;UBERON:0004872!3.89e-11!84;UBERON:0007100!5.41e-11!27;UBERON:0000490!7.30e-11!138;UBERON:0000119!1.28e-09!312;UBERON:0000948!2.58e-09!24;UBERON:0005498!2.58e-09!24;UBERON:0004140!2.58e-09!24;UBERON:0009881!2.58e-09!24;UBERON:0004141!2.58e-09!24;UBERON:0003084!2.58e-09!24;UBERON:0007005!2.58e-09!24;UBERON:0004139!2.58e-09!24;UBERON:0004291!2.58e-09!24;UBERON:0000483!2.80e-09!309;UBERON:0002049!2.91e-09!79;UBERON:0007798!2.91e-09!79;UBERON:0000477!5.56e-09!286;UBERON:0003103!9.91e-09!69;UBERON:0003914!1.28e-08!118;UBERON:0000926!3.13e-08!448;UBERON:0004120!3.13e-08!448;UBERON:0006603!3.13e-08!448;UBERON:0001981!1.18e-07!60;UBERON:0007500!1.18e-07!60;UBERON:0004537!1.18e-07!60;UBERON:0006965!1.18e-07!60;UBERON:0000055!3.30e-07!69;UBERON:0000922!5.31e-07!612;UBERON:0002050!5.57e-07!605;UBERON:0005423!5.57e-07!605;UBERON:0000923!8.31e-07!604;UBERON:0005291!8.31e-07!604;UBERON:0006598!8.31e-07!604;UBERON:0002532!8.31e-07!604;UBERON:0001637!9.84e-07!42;UBERON:0003509!9.84e-07!42;UBERON:0004572!9.84e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.30e-14;31!UBERON:0001015;4.30e-14;31!UBERON:0000383;4.30e-14;31!UBERON:0007100;1.50e-11;25!UBERON:0000948;1.04e-09;22!UBERON:0001134;2.36e-09;16!UBERON:0002036;2.36e-09;16!UBERON:0002204;9.61e-09;70 | |||
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| ||
|short_description=p2@NEXN | |||
}} | }} |
Latest revision as of 07:37, 19 September 2015
Short description: | p2@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEXN_5end |
Coexpression cluster: | C933_skeletal_heart_left_penis_Cardiac_Preadipocyte_tongue |
Association with transcript: | 0bp_to_ENST00000294624_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | E7EQF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.31e-22 | 76 |
muscle precursor cell | 1.19e-18 | 58 |
myoblast | 1.19e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-18 | 58 |
muscle cell | 5.96e-17 | 55 |
electrically responsive cell | 5.06e-14 | 61 |
electrically active cell | 5.06e-14 | 61 |
mesodermal cell | 4.69e-12 | 121 |
smooth muscle cell | 6.97e-12 | 43 |
smooth muscle myoblast | 6.97e-12 | 43 |
skin fibroblast | 4.69e-09 | 23 |
vascular associated smooth muscle cell | 1.24e-07 | 32 |