FFCP PHASE1:Hg19::chr21:42733946..42733963,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:42733946..42733963,+ to FFCP PHASE1:Hg19::chr21:42733946..42733963,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4600 | |EntrezGene=4600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7533 | |HGNC=7533 | ||
|TSSclassifier=strong | |||
|UniProt=P20592 | |UniProt=P20592 | ||
|association_with_transcript=0bp_to_ENST00000494252,ENST00000495892,NM_002463,uc002yze.1,uc002yzf.1_5end | |||
|cluster_id=chr21:42733946..42733963,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_MX2_5end | |||
|id=chr21:42733946..42733963,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.70e-45!140;CL:0002087!6.63e-38!119;CL:0002031!2.68e-36!124;CL:0000037!7.39e-34!172;CL:0000566!7.39e-34!172;CL:0002032!1.74e-31!165;CL:0000837!1.74e-31!165;CL:0000766!1.93e-30!76;CL:0000988!1.12e-28!182;CL:0002057!2.25e-27!42;CL:0000557!6.16e-26!71;CL:0002009!1.02e-24!65;CL:0002194!2.07e-24!63;CL:0000576!2.07e-24!63;CL:0000040!2.07e-24!63;CL:0000559!2.07e-24!63;CL:0000839!1.47e-23!70;CL:0000860!2.77e-23!45;CL:0000763!1.20e-18!112;CL:0000049!1.20e-18!112;CL:0000134!1.06e-13!358;CL:0002320!2.09e-12!365;CL:0000838!3.89e-12!52;CL:0000542!4.42e-12!53;CL:0000051!4.42e-12!53;CL:0000219!4.15e-10!390;CL:0000791!1.09e-07!18;CL:0000789!1.09e-07!18;CL:0002420!1.09e-07!18;CL:0002419!1.09e-07!18;CL:0000790!1.09e-07!18;CL:0000084!3.75e-07!25;CL:0000827!3.75e-07!25;CL:0000048!4.39e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.73e-23;33!CL:0002057;9.73e-23;33!CL:0000473;5.27e-21;39!CL:0000234;5.27e-21;39!CL:0000576;3.89e-19;48!CL:0000766;1.93e-16;69!CL:0002087;2.90e-13;104!CL:0000738;5.93e-11;136!CL:0000791;1.15e-08;18!CL:0000789;1.15e-08;18!CL:0002419;1.15e-08;18!CL:0000763;4.27e-08;100!CL:0000542;1.65e-07;53!CL:0000084;2.16e-07;25!CL:0000094;5.45e-07;8!CL:0000219;9.98e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.65e-52,136;CL:0002087,5.01e-44,115;CL:0002031,1.55e-42,120;CL:0000037,3.36e-40,168;CL:0002032,1.73e-37,161;CL:0000837,1.73e-37,161;CL:0000766,2.56e-37,72;CL:0000988,5.78e-35,177;CL:0000473,8.00e-33,48;CL:0000234,8.00e-33,48;CL:0000557,4.88e-32,67;CL:0002009,8.88e-31,61;CL:0000860,1.69e-30,42;CL:0002057,1.69e-30,42;CL:0002194,1.74e-30,59;CL:0000576,1.74e-30,59;CL:0000040,1.74e-30,59;CL:0000559,1.74e-30,59;CL:0000839,1.18e-29,66;CL:0000763,1.16e-23,108;CL:0000049,1.16e-23,108;CL:0000134,2.65e-14,354;CL:0002320,7.85e-13,361;CL:0000838,1.31e-12,52;CL:0000542,1.48e-12,53;CL:0000051,1.48e-12,53;CL:0000219,1.49e-11,386;CL:0000791,1.18e-08,18;CL:0000789,1.18e-08,18;CL:0002420,1.18e-08,18;CL:0002419,1.18e-08,18;CL:0000790,1.18e-08,18;CL:0000084,2.69e-07,25;CL:0000827,2.69e-07,25;CL:0002393,5.47e-07,9;CL:0002397,5.47e-07,9;CL:0000094,5.65e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.84e-22;42!CL:0000790;1.15e-08;18!CL:0000049;5.49e-08;108!CL:0000051;1.65e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.66e-30!102;UBERON:0003061!2.66e-30!102;UBERON:0002193!8.63e-29!112;UBERON:0002371!3.06e-24!80;UBERON:0001474!5.68e-20!86;UBERON:0002405!5.14e-19!115;UBERON:0004765!3.82e-17!101;UBERON:0001434!3.82e-17!101;UBERON:0002384!1.01e-11!375;UBERON:0007023!2.76e-09!115;UBERON:0002204!2.03e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.57e-37,98;UBERON:0003061,4.57e-37,98;UBERON:0002193,1.18e-34,108;UBERON:0002371,1.99e-29,76;UBERON:0002405,3.99e-29,93;UBERON:0001474,9.53e-25,82;UBERON:0004765,1.42e-21,90;UBERON:0001434,3.23e-19,100;UBERON:0002384,1.74e-12,371;UBERON:0003081,4.04e-10,203;UBERON:0002204,1.43e-07,167 | |||
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| ||
|short_description=p1@MX2 | |||
}} | }} |
Latest revision as of 12:55, 18 September 2015
Short description: | p1@MX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MX2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000494252, ENST00000495892, NM_002463, uc002yze.1, uc002yzf.1_5end |
EntrezGene: | MX2 |
HGNC: | 7533 |
UniProt: | P20592 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.57e-37 | 98 |
blood island | 4.57e-37 | 98 |
hemolymphoid system | 1.18e-34 | 108 |
bone marrow | 1.99e-29 | 76 |
immune system | 3.99e-29 | 93 |
bone element | 9.53e-25 | 82 |
skeletal element | 1.42e-21 | 90 |
skeletal system | 3.23e-19 | 100 |
connective tissue | 1.74e-12 | 371 |
lateral plate mesoderm | 4.04e-10 | 203 |
musculoskeletal system | 1.43e-07 | 167 |