FFCP PHASE1:Hg19::chr22:42828358..42828372,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:42828358..42828372,- to FFCP PHASE1:Hg19::chr22:42828358..42828372,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150372 | |EntrezGene=150372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29872 | |HGNC=29872 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE95 | |UniProt=F8WE95 | ||
|association_with_transcript=0bp_to_ENST00000355469_5end | |||
|cluster_id=chr22:42828358..42828372,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_NFAM1_5end | |||
|id=chr22:42828358..42828372,- | |||
|ontology_enrichment_celltype=CL:0000766!7.39e-50!76;CL:0000763!1.49e-44!112;CL:0000049!1.49e-44!112;CL:0000557!4.32e-44!71;CL:0002009!6.83e-44!65;CL:0002194!2.06e-42!63;CL:0000576!2.06e-42!63;CL:0000040!2.06e-42!63;CL:0000559!2.06e-42!63;CL:0000839!3.29e-40!70;CL:0000738!4.00e-40!140;CL:0002057!1.30e-38!42;CL:0000037!5.01e-38!172;CL:0000566!5.01e-38!172;CL:0002032!5.36e-36!165;CL:0000837!5.36e-36!165;CL:0000860!1.16e-34!45;CL:0000988!2.56e-34!182;CL:0002087!1.25e-30!119;CL:0002031!5.57e-30!124;CL:0002393!3.76e-09!9;CL:0002397!3.76e-09!9;CL:0000094!7.68e-09!8;CL:0000990!5.59e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.00e-36;33!CL:0002057;8.00e-36;33!CL:0000473;6.55e-35;39!CL:0000234;6.55e-35;39!CL:0000576;2.59e-34;48!CL:0000766;1.85e-26;69!CL:0000763;6.15e-15;100!CL:0002087;2.06e-11;104!CL:0000738;2.20e-11;136!CL:0000094;5.43e-11;8!CL:0000990;2.06e-08;8!CL:0002393;2.42e-08;6!CL:0002397;2.42e-08;6!CL:0000988;9.90e-08;177!CL:0000081;2.32e-07;11!CL:0000235;3.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-64,72;CL:0002009,5.93e-63,61;CL:0002194,5.00e-61,59;CL:0000576,5.00e-61,59;CL:0000040,5.00e-61,59;CL:0000559,5.00e-61,59;CL:0000557,5.39e-57,67;CL:0000763,1.41e-55,108;CL:0000049,1.41e-55,108;CL:0000473,1.52e-55,48;CL:0000234,1.52e-55,48;CL:0000839,3.20e-52,66;CL:0000860,1.34e-49,42;CL:0002057,1.34e-49,42;CL:0000738,1.10e-46,136;CL:0000037,2.70e-43,168;CL:0002032,1.99e-41,161;CL:0000837,1.99e-41,161;CL:0000988,1.97e-39,177;CL:0002087,5.29e-39,115;CL:0002031,8.85e-35,120;CL:0002393,2.19e-11,9;CL:0002397,2.19e-11,9;CL:0000094,5.52e-11,8;CL:0000990,1.40e-08,8;CL:0000134,1.29e-07,354;CL:0000081,2.34e-07,11;CL:0000235,3.38e-07,6;CL:0002320,5.13e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-35;42!CL:0000049;1.09e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.51e-46!102;UBERON:0003061!5.51e-46!102;UBERON:0007023!1.01e-43!115;UBERON:0002193!1.75e-41!112;UBERON:0002371!2.98e-37!80;UBERON:0001474!1.02e-32!86;UBERON:0002405!1.37e-27!115;UBERON:0004765!1.82e-26!101;UBERON:0001434!1.82e-26!101;UBERON:0003081!9.12e-14!216;UBERON:0001049!2.95e-13!57;UBERON:0005068!2.95e-13!57;UBERON:0006241!2.95e-13!57;UBERON:0007135!2.95e-13!57;UBERON:0002204!1.08e-10!167;UBERON:0003080!1.13e-10!42;UBERON:0002780!2.25e-10!41;UBERON:0001890!2.25e-10!41;UBERON:0006240!2.25e-10!41;UBERON:0002616!5.59e-10!59;UBERON:0000178!6.75e-09!15;UBERON:0000179!6.75e-09!15;UBERON:0000463!6.75e-09!15;UBERON:0002020!3.26e-08!34;UBERON:0003528!3.26e-08!34;UBERON:0001893!3.89e-08!34;UBERON:0003075!5.43e-08!86;UBERON:0007284!5.43e-08!86;UBERON:0002791!7.21e-08!33;UBERON:0000479!7.49e-08!787;UBERON:0000955!1.02e-07!69;UBERON:0006238!1.02e-07!69;UBERON:0001017!1.07e-07!82;UBERON:0001869!1.77e-07!32;UBERON:0002346!1.89e-07!90;UBERON:0005743!2.62e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-11;15!UBERON:0000179;1.36e-11;15!UBERON:0000463;1.36e-11;15!UBERON:0002390;7.96e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.38e-61,98;UBERON:0003061,2.38e-61,98;UBERON:0002193,2.24e-56,108;UBERON:0002371,4.40e-49,76;UBERON:0002405,4.45e-45,93;UBERON:0001474,8.22e-44,82;UBERON:0004765,6.68e-38,90;UBERON:0001434,3.15e-33,100;UBERON:0003081,1.00e-24,203;UBERON:0007023,2.08e-20,114;UBERON:0002204,1.38e-14,167;UBERON:0000178,1.40e-11,15;UBERON:0000179,1.40e-11,15;UBERON:0000463,1.40e-11,15;UBERON:0000926,8.05e-11,315;UBERON:0004120,8.05e-11,315;UBERON:0006603,8.05e-11,315;UBERON:0000479,4.19e-07,773 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0,0,57.8245486967889,28.4033754591937,52.0182174342015,0,0,0,0,0,1.46800219667424,114.123054157567,97.2640570230187,107.637391875063,42.7678555798256,39.5150272543155,52.8029913650082,118.790361082904,103.915884514423,143.124596100812,113.890228083785,81.4112418283215,74.63923538572,91.4861807584439,94.0109792961799,57.7016640928148,115.834548727504,101.986580006245,102.9241298117,111.815949688307,72.3201297653291,71.0126210846467,127.636983118666,105.264720880959,109.965985637435,121.055427168525,107.909838773303,106.129962882641,80.9683775773749,71.4905383110836,74.738669879469,104.016947416292,89.1735790498544,72.1066964420987,86.5721288765717,81.3893575532518,74.6851234360487,63.5878411798945,90.1442231851785,76.1060883195404,104.80261285968,111.581431381239,96.1139008448539,60.4227016731447,66.0403368300979,63.7497896638572,0,1.63841583378639,0.889509253863555,6.40095333849761,1.60158394814405,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,6.1655941927969,1.31692042387539,0.786839080455332,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,1.91139248594458,0,0,6.92645547757755,2.55973222308837,3.74792179657038,8.76075832562862,2.46338399076314,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,2.16115474571226,0,0,2.92092654289215,3.83085422058388,8.90818335476397,3.57735936458013,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,453.324635980058,422.680487921675,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0343693469816,34.8666355057464,25.71319107595,0,0,0,0,0,0,0,0.880484340132261,0.207328115540772,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.0546585795333,28.6286542116312,12.6500363689819,0,0,0,0,0,0,0,4.13764596424047,0.431255149719035,3.08023287071396,0,0,0,0.335032530668698,0,349.037273159387,206.421406850777,316.613452265131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,58.9288874450229,53.9285502046542,39.7026515028813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73988653579522,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,6.21349085126742,0,0,0,0,128.891692744971,153.692078635617,190.26216051617,98.3897232640669,118.472334648824,190.002680179466,127.447419188195,165.763161845503,0,0,0,0,0,0,0,0,0,0,1.94773164164733,0.280797178113459,18.943478359755,12.8477514533879,5.01268954180134,0.169291777801603,0,0.201799707191048,25.9766204991099,14.4272244797421,1.84344458585075,1.78940886313933,3.33698283423817,17.5849285861836,0,0,0,0,0,0,7.61842532213849,0,0,0,0,1.48482340416319,0,0,0.281338832821026,0,0,0,3.58646378851925,2.21027132424918,0,0,0.246169610922139,0,0,0,3.5810065915881,1.38100767891707,74.2397586275513,0,0.969332746095218,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0,0,0,2.65722415744152,0.723578631752448,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,1.50377859655677,3.05515072466813,0,0,0,1.7524294574976,2.40773294189637,0.234264445725339,0,0,0,0.394584402849391,4.83962864194656,0,8.84612114798832,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,1.35784623083787,0,0.451961481561065,0,0,0.569797163602908,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,0.958337652243951,1.27746588066972,0,0,1.67569440763353,0.458320848023367,0.717873024576814,1.39775300349294,2.57535628881943,3.34757186162809,1.41085292222125,0,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0,0,0,18.897806890326,6.1904156364636,0.668245123238271,0,1.10327990218877,0.524545881349981,0,0,0,2.85878130549347,3.97255182219259,0,0,0,0,0,0,0,0,6.30174604815755,10.6005511129777,1.93924434542326,1.05786081394152,0,0,10.7855286693372,1.10043013569766,7.87054205159671,32.2507914177768,0,0,0,0,0.5013797880454,0.919036730290385,0.327872630709804,0,1.77213635993397,1.95242023843141,0.876336514945499,0.573409195690071,0.887432412294818,1.98708489412427,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,1.94860308839388,4.51740457065435,4.57983103916364,0,0,0,0,8.53533837553127,0,0,0,0,2.48830904013189,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.02766760154335,1.41696576325585,0.957803154342908,0.615349092722265,0.252071696221718,0.691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,0.781514011233092,0,0,0,0.607838261565552,0.781078098613847,1.2401207790071,1.07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| ||
|short_description=p2@NFAM1 | |||
}} | }} |
Latest revision as of 23:51, 24 September 2015
Short description: | p2@NFAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFAM1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000355469_5end |
EntrezGene: | NFAM1 |
HGNC: | 29872 |
UniProt: | F8WE95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.48e-64 | 72 |
macrophage dendritic cell progenitor | 5.93e-63 | 61 |
monopoietic cell | 5.00e-61 | 59 |
monocyte | 5.00e-61 | 59 |
monoblast | 5.00e-61 | 59 |
promonocyte | 5.00e-61 | 59 |
granulocyte monocyte progenitor cell | 5.39e-57 | 67 |
myeloid cell | 1.41e-55 | 108 |
common myeloid progenitor | 1.41e-55 | 108 |
defensive cell | 1.52e-55 | 48 |
phagocyte | 1.52e-55 | 48 |
myeloid lineage restricted progenitor cell | 3.20e-52 | 66 |
classical monocyte | 1.34e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-49 | 42 |
leukocyte | 1.10e-46 | 136 |
hematopoietic stem cell | 2.70e-43 | 168 |
hematopoietic oligopotent progenitor cell | 1.99e-41 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-41 | 161 |
hematopoietic cell | 1.97e-39 | 177 |
nongranular leukocyte | 5.29e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 8.85e-35 | 120 |
intermediate monocyte | 2.19e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.19e-11 | 9 |
granulocyte | 5.52e-11 | 8 |
conventional dendritic cell | 1.40e-08 | 8 |
mesenchymal cell | 1.29e-07 | 354 |
blood cell | 2.34e-07 | 11 |
macrophage | 3.38e-07 | 6 |
connective tissue cell | 5.13e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.38e-61 | 98 |
blood island | 2.38e-61 | 98 |
hemolymphoid system | 2.24e-56 | 108 |
bone marrow | 4.40e-49 | 76 |
immune system | 4.45e-45 | 93 |
bone element | 8.22e-44 | 82 |
skeletal element | 6.68e-38 | 90 |
skeletal system | 3.15e-33 | 100 |
lateral plate mesoderm | 1.00e-24 | 203 |
adult organism | 2.08e-20 | 114 |
musculoskeletal system | 1.38e-14 | 167 |
blood | 1.40e-11 | 15 |
haemolymphatic fluid | 1.40e-11 | 15 |
organism substance | 1.40e-11 | 15 |
mesoderm | 8.05e-11 | 315 |
mesoderm-derived structure | 8.05e-11 | 315 |
presumptive mesoderm | 8.05e-11 | 315 |
tissue | 4.19e-07 | 773 |