FFCP PHASE1:Hg19::chr2:45168856..45168867,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:45168856..45168867,+ to FFCP PHASE1:Hg19::chr2:45168856..45168867,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt=O95343 | |UniProt=O95343 | ||
|association_with_transcript=-34bp_to_ENST00000260653_5end | |||
|cluster_id=chr2:45168856..45168867,+ | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_7_at_SIX3_5end | |||
|id=chr2:45168856..45168867,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.81e-09!5;CL:0002586!6.66e-08!3;CL:0000064!9.04e-08!3;CL:0005012!9.04e-08!3;CL:0000067!9.04e-08!3;CL:0002304!9.04e-08!3;CL:0000075!2.55e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002586;8.64e-19;3!CL:0000064;1.76e-18;3!CL:0000067;1.76e-18;3!CL:0005012;1.76e-18;3!CL:0002304;1.76e-18;3!CL:0000149;3.16e-14;4!CL:0000306;7.60e-14;4!CL:0002222;7.60e-14;4!CL:0002224;7.60e-14;4!CL:0000075;9.39e-10;27!CL:0000147;6.58e-07;14!CL:0000342;7.72e-07;1!CL:0002565;7.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.65e-19,3;CL:0000064,1.98e-18,3;CL:0000067,1.98e-18,3;CL:0005012,1.98e-18,3;CL:0002304,1.98e-18,3;CL:0000149,3.16e-14,4;CL:0000306,8.30e-14,4;CL:0002222,8.30e-14,4;CL:0002224,8.30e-14,4;CL:0000075,1.05e-09,27;CL:0000342,5.45e-07,1;CL:0002565,5.45e-07,1;CL:0000147,5.99e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.89e-18;3!UBERON:0010122;1.32e-12;2!UBERON:0006222;7.72e-07;1!UBERON:0005425;7.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;5.30e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.00e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003056!3.79e-28!61;UBERON:0002346!9.55e-27!90;UBERON:0003075!2.67e-25!86;UBERON:0007284!2.67e-25!86;UBERON:0007625!1.07e-19!11;UBERON:0002104!1.58e-18!21;UBERON:0000970!6.92e-17!20;UBERON:0000073!7.27e-17!94;UBERON:0001016!7.27e-17!94;UBERON:0001032!1.09e-15!24;UBERON:0004456!1.09e-15!24;UBERON:0005743!1.21e-15!86;UBERON:0002780!1.54e-15!41;UBERON:0001890!1.54e-15!41;UBERON:0006240!1.54e-15!41;UBERON:0000924!2.71e-15!173;UBERON:0006601!2.71e-15!173;UBERON:0000019!3.72e-15!19;UBERON:0000047!3.72e-15!19;UBERON:0004088!3.72e-15!19;UBERON:0003072!3.72e-15!19;UBERON:0003071!3.72e-15!19;UBERON:0004128!3.72e-15!19;UBERON:0003080!4.85e-15!42;UBERON:0002616!5.90e-15!59;UBERON:0000020!3.43e-14!23;UBERON:0004121!3.53e-14!169;UBERON:0001456!2.17e-13!21;UBERON:0000033!3.32e-13!123;UBERON:0001049!5.60e-13!57;UBERON:0005068!5.60e-13!57;UBERON:0006241!5.60e-13!57;UBERON:0007135!5.60e-13!57;UBERON:0000955!8.42e-13!69;UBERON:0006238!8.42e-13!69;UBERON:0000153!3.93e-12!129;UBERON:0007811!3.93e-12!129;UBERON:0000966!5.30e-12!5;UBERON:0005388!5.30e-12!5;UBERON:0001802!5.30e-12!5;UBERON:0001017!1.15e-11!82;UBERON:0009663!4.25e-11!7;UBERON:0002420!6.24e-11!9;UBERON:0007245!6.24e-11!9;UBERON:0010009!6.24e-11!9;UBERON:0010011!6.24e-11!9;UBERON:0000454!6.24e-11!9;UBERON:0002308!6.34e-11!9;UBERON:0000125!6.34e-11!9;UBERON:0001894!1.96e-10!7;UBERON:0006222!1.96e-10!7;UBERON:0000488!1.04e-09!4;UBERON:0000369!1.32e-09!4;UBERON:0002435!1.32e-09!4;UBERON:0000204!1.32e-09!4;UBERON:0010082!1.32e-09!4;UBERON:0001893!4.18e-09!34;UBERON:0005085!8.39e-09!29;UBERON:0001869!1.66e-08!32;UBERON:0002791!2.86e-08!33;UBERON:0001781!6.66e-08!3;UBERON:0001782!6.66e-08!3;UBERON:0005424!6.66e-08!3;UBERON:0002020!7.27e-08!34;UBERON:0003528!7.27e-08!34;UBERON:0001778!9.04e-08!3;UBERON:0001775!9.04e-08!3;UBERON:0005383!9.65e-08!3;UBERON:0005382!9.65e-08!3;UBERON:0001801!3.73e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002104;7.46e-52;21!UBERON:0007625;8.46e-52;11!UBERON:0000970;3.36e-47;20!UBERON:0001032;5.20e-45;24!UBERON:0004456;5.20e-45;24!UBERON:0000019;2.50e-42;19!UBERON:0000047;2.50e-42;19!UBERON:0004088;2.50e-42;19!UBERON:0010230;2.50e-42;19!UBERON:0000020;1.06e-40;23!UBERON:0001456;4.51e-38;21!UBERON:0000966;6.50e-30;5!UBERON:0005388;6.50e-30;5!UBERON:0001802;6.50e-30;5!UBERON:0000488;1.36e-23;4!UBERON:0000369;1.81e-23;4!UBERON:0002435;1.81e-23;4!UBERON:0000204;1.81e-23;4!UBERON:0009663;2.20e-20;7!UBERON:0001801;1.24e-19;14!UBERON:0001781;8.64e-19;3!UBERON:0001782;8.64e-19;3!UBERON:0001778;1.76e-18;3!UBERON:0001775;1.76e-18;3!UBERON:0005383;2.36e-18;3!UBERON:0005382;2.36e-18;3!UBERON:0010371;1.77e-16;31!UBERON:0002420;8.07e-16;9!UBERON:0000125;8.07e-16;9!UBERON:0007245;8.07e-16;9!UBERON:0002308;8.07e-16;9!UBERON:0010009;8.07e-16;9!UBERON:0010011;8.07e-16;9!UBERON:0000454;8.07e-16;9!UBERON:0002203;8.49e-16;6!UBERON:0001768;8.49e-16;6!UBERON:0002200;8.49e-16;6!UBERON:0010077;7.60e-14;4!UBERON:0005389;7.60e-14;4!UBERON:0000484;7.60e-14;4!UBERON:0000965;7.60e-14;4!UBERON:0001803;7.60e-14;4!UBERON:0001873;1.32e-12;2!UBERON:0001444;7.24e-11;48!UBERON:0000033;3.66e-10;50!UBERON:0006876;1.14e-08;11!UBERON:0001894;6.91e-08;7!UBERON:0000153;1.65e-07;54!UBERON:0001874;1.80e-07;1!UBERON:0007811;1.90e-07;52!UBERON:0001882;7.72e-07;1!UBERON:0000941;7.72e-07;1!UBERON:0001785;7.72e-07;1!UBERON:0002464;7.72e-07;1!UBERON:0004904;7.72e-07;1!UBERON:0001021;7.72e-07;1!UBERON:0002506;7.72e-07;1!UBERON:0005403;7.72e-07;1!UBERON:0001769;7.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.34e-52,21;UBERON:0002104,7.34e-52,21;UBERON:0007625,7.64e-52,11;UBERON:0000019,6.51e-47,20;UBERON:0000047,6.51e-47,20;UBERON:0010312,6.51e-47,20;UBERON:0004088,6.51e-47,20;UBERON:0010230,6.51e-47,20;UBERON:0003072,6.51e-47,20;UBERON:0004128,6.51e-47,20;UBERON:0003071,6.51e-47,20;UBERON:0000020,5.13e-45,24;UBERON:0001032,5.13e-45,24;UBERON:0004456,5.13e-45,24;UBERON:0001456,2.08e-42,22;UBERON:0003056,9.91e-37,61;UBERON:0000966,5.49e-35,6;UBERON:0005388,5.49e-35,6;UBERON:0001802,5.49e-35,6;UBERON:0005085,2.50e-29,31;UBERON:0003075,2.66e-26,82;UBERON:0007284,2.66e-26,82;UBERON:0002346,6.93e-25,86;UBERON:0001781,8.04e-24,4;UBERON:0000488,1.08e-23,4;UBERON:0000369,2.04e-23,4;UBERON:0002435,2.04e-23,4;UBERON:0000204,2.04e-23,4;UBERON:0010082,2.04e-23,4;UBERON:0009663,2.03e-20,7;UBERON:0010371,7.54e-20,104;UBERON:0001801,1.17e-19,14;UBERON:0001782,8.65e-19,3;UBERON:0005424,8.65e-19,3;UBERON:0001778,1.98e-18,3;UBERON:0001775,1.98e-18,3;UBERON:0005383,2.36e-18,3;UBERON:0005382,2.36e-18,3;UBERON:0001444,1.41e-17,49;UBERON:0010314,2.10e-16,132;UBERON:0002203,7.29e-16,6;UBERON:0001768,7.29e-16,6;UBERON:0002200,7.29e-16,6;UBERON:0002420,7.59e-16,9;UBERON:0000125,7.59e-16,9;UBERON:0007245,7.59e-16,9;UBERON:0002308,7.59e-16,9;UBERON:0010009,7.59e-16,9;UBERON:0010011,7.59e-16,9;UBERON:0000454,7.59e-16,9;UBERON:0000033,4.77e-15,56;UBERON:0010077,8.30e-14,4;UBERON:0005389,8.30e-14,4;UBERON:0000484,8.30e-14,4;UBERON:0002546,8.30e-14,4;UBERON:0000965,8.30e-14,4;UBERON:0001803,8.30e-14,4;UBERON:0003073,8.30e-14,4;UBERON:0005426,8.30e-14,4;UBERON:0000153,2.45e-13,62;UBERON:0007811,2.45e-13,62;UBERON:0001873,1.36e-12,2;UBERON:0010122,1.36e-12,2;UBERON:0004121,2.01e-11,171;UBERON:0000924,2.01e-11,171;UBERON:0006601,2.01e-11,171;UBERON:0006876,1.05e-08,11;UBERON:0001894,8.46e-08,7;UBERON:0006222,8.46e-08,7;UBERON:0002780,1.60e-07,41;UBERON:0001890,1.60e-07,41;UBERON:0003080,1.60e-07,41;UBERON:0006240,1.60e-07,41;UBERON:0001874,1.75e-07,1;UBERON:0000076,3.94e-07,8;UBERON:0002506,5.45e-07,1;UBERON:0001769,5.45e-07,1;UBERON:0001882,8.67e-07,1;UBERON:0005403,8.67e-07,1;UBERON:0000941,9.18e-07,1;UBERON:0001785,9.18e-07,1;UBERON:0002464,9.18e-07,1;UBERON:0004904,9.18e-07,1;UBERON:0001021,9.18e-07,1;UBERON:0003902,9.18e-07,1;UBERON:0005425,9.18e-07,1 | |||
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| ||
|short_description=p7@SIX3 | |||
}} | }} |
Latest revision as of 09:35, 17 September 2015
Short description: | p7@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SIX3_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | -34bp_to_ENST00000260653_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.65e-19 | 3 |
ciliated cell | 1.98e-18 | 3 |
ciliated epithelial cell | 1.98e-18 | 3 |
multi-ciliated epithelial cell | 1.98e-18 | 3 |
non-pigmented ciliary epithelial cell | 1.98e-18 | 3 |
visual pigment cell | 3.16e-14 | 4 |
crystallin accumulating cell | 8.30e-14 | 4 |
vertebrate lens cell | 8.30e-14 | 4 |
lens epithelial cell | 8.30e-14 | 4 |
columnar/cuboidal epithelial cell | 1.05e-09 | 27 |
pigment cell (sensu Vertebrata) | 5.45e-07 | 1 |
iris pigment epithelial cell | 5.45e-07 | 1 |
pigment cell | 5.99e-07 | 14 |
Ontology term | p-value | n |
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