FFCP PHASE1:Hg19::chr3:171178253..171178262,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:171178253..171178262,- to FFCP PHASE1:Hg19::chr3:171178253..171178262,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23043 | |EntrezGene=23043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30765 | |HGNC=30765 | ||
|TSSclassifier=strong | |||
|UniProt=F5H865,Q9UKE5,F5H5M9 | |UniProt=F5H865,Q9UKE5,F5H5M9 | ||
|association_with_transcript=-56bp_to_ENST00000341852,ENST00000369326,ENST00000436636,ENST00000538048,NM_001161560,NM_001161561,NM_001161562,NM_001161563,NM_001161564,NM_001161565,NM_001161566,NM_015028,NR_027767,uc003fhh.2,uc003fhi.2,uc003fhj.2,uc003fhk.2,uc003fhl.2,uc003fhm.2,uc003 | |||
|cluster_id=chr3:171178253..171178262,- | |||
|description=CAGE_peak_6_at_TNIK_5end | |||
|id=chr3:171178253..171178262,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.74e-07;82!UBERON:0010122;8.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.55e-23!57;UBERON:0005068!8.55e-23!57;UBERON:0006241!8.55e-23!57;UBERON:0007135!8.55e-23!57;UBERON:0000073!2.04e-21!94;UBERON:0001016!2.04e-21!94;UBERON:0005743!3.85e-20!86;UBERON:0001017!8.50e-20!82;UBERON:0007023!5.02e-19!115;UBERON:0002616!7.92e-19!59;UBERON:0000955!2.48e-18!69;UBERON:0006238!2.48e-18!69;UBERON:0003080!1.21e-17!42;UBERON:0002780!3.36e-17!41;UBERON:0001890!3.36e-17!41;UBERON:0006240!3.36e-17!41;UBERON:0001893!5.36e-16!34;UBERON:0002020!7.33e-16!34;UBERON:0003528!7.33e-16!34;UBERON:0001869!1.88e-15!32;UBERON:0002791!2.48e-15!33;UBERON:0003075!6.64e-15!86;UBERON:0007284!6.64e-15!86;UBERON:0002346!3.94e-13!90;UBERON:0002619!1.37e-12!22;UBERON:0003056!1.12e-11!61;UBERON:0001950!2.42e-11!20;UBERON:0000956!4.87e-11!25;UBERON:0000203!4.87e-11!25;UBERON:0000153!1.23e-08!129;UBERON:0007811!1.23e-08!129;UBERON:0000033!3.24e-08!123;UBERON:0004121!3.48e-08!169;UBERON:0000924!2.20e-07!173;UBERON:0006601!2.20e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.30e-31;32!UBERON:0002791;3.15e-29;32!UBERON:0001893;7.95e-29;34!UBERON:0002780;1.51e-27;41!UBERON:0001890;1.51e-27;41!UBERON:0002619;9.54e-26;22!UBERON:0001950;1.63e-24;20!UBERON:0003528;2.96e-24;34!UBERON:0002020;2.96e-24;34!UBERON:0000073;9.67e-23;53!UBERON:0002616;9.67e-23;53!UBERON:0000956;2.48e-22;25!UBERON:0000203;2.48e-22;25!UBERON:0002021;2.14e-15;5!UBERON:0001017;2.59e-15;75!UBERON:0000955;1.68e-14;68!UBERON:0000369;2.10e-12;4!UBERON:0002435;2.10e-12;4!UBERON:0000204;2.10e-12;4!UBERON:0002420;1.88e-11;9!UBERON:0007245;1.88e-11;9!UBERON:0010009;1.88e-11;9!UBERON:0010011;1.88e-11;9!UBERON:0000454;1.88e-11;9!UBERON:0001016;5.57e-11;83!UBERON:0009663;1.36e-10;7!UBERON:0005383;7.81e-10;3!UBERON:0005382;7.81e-10;3!UBERON:0000125;3.72e-08;9!UBERON:0002308;3.72e-08;9!UBERON:0011216;2.75e-07;132!UBERON:0003296;3.75e-07;4!UBERON:0010133;3.75e-07;4!UBERON:0002784;3.75e-07;4!UBERON:0001871;7.45e-07;6!UBERON:0001894;7.45e-07;7!UBERON:0001905;8.12e-07;2!UBERON:0001873;8.12e-07;2!UBERON:0002757;8.12e-07;2!UBERON:0010134;8.12e-07;2!UBERON:0005408;8.12e-07;2!UBERON:0001899;8.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.67e-43,56;UBERON:0005068,4.67e-43,56;UBERON:0006241,4.67e-43,56;UBERON:0007135,4.67e-43,56;UBERON:0000073,1.14e-42,53;UBERON:0002616,1.14e-42,53;UBERON:0002780,4.82e-38,41;UBERON:0001890,4.82e-38,41;UBERON:0003080,4.82e-38,41;UBERON:0006240,4.82e-38,41;UBERON:0000955,4.71e-36,68;UBERON:0006238,4.71e-36,68;UBERON:0001869,4.99e-35,32;UBERON:0001017,2.41e-33,81;UBERON:0001893,1.08e-32,34;UBERON:0002791,1.42e-31,32;UBERON:0001016,3.77e-31,89;UBERON:0003528,1.87e-29,34;UBERON:0002020,1.87e-29,34;UBERON:0003075,6.89e-27,82;UBERON:0007284,6.89e-27,82;UBERON:0002619,6.94e-26,22;UBERON:0002346,2.89e-25,86;UBERON:0001950,1.23e-24,20;UBERON:0003056,1.49e-23,61;UBERON:0010371,1.21e-22,104;UBERON:0000956,1.88e-22,25;UBERON:0000203,1.88e-22,25;UBERON:0010314,1.15e-18,132;UBERON:0007023,2.18e-17,114;UBERON:0002021,2.95e-15,5;UBERON:0004121,3.72e-14,171;UBERON:0000924,3.72e-14,171;UBERON:0006601,3.72e-14,171;UBERON:0011216,6.41e-13,223;UBERON:0000369,1.15e-12,4;UBERON:0002435,1.15e-12,4;UBERON:0000204,1.15e-12,4;UBERON:0010082,1.15e-12,4;UBERON:0002420,1.09e-11,9;UBERON:0007245,1.09e-11,9;UBERON:0010009,1.09e-11,9;UBERON:0010011,1.09e-11,9;UBERON:0000454,1.09e-11,9;UBERON:0009663,6.40e-11,7;UBERON:0005383,2.32e-10,3;UBERON:0005382,2.32e-10,3;UBERON:0000025,3.90e-10,192;UBERON:0000125,2.09e-08,9;UBERON:0002308,2.09e-08,9;UBERON:0001873,2.10e-07,2;UBERON:0010122,2.10e-07,2;UBERON:0002784,3.94e-07,4;UBERON:0004111,4.28e-07,240;UBERON:0003076,4.46e-07,15;UBERON:0003057,4.46e-07,15;UBERON:0001871,8.85e-07,6;UBERON:0003296,9.59e-07,4;UBERON:0010133,9.59e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.547497700291537,0,1.06978768047132,0.492603536699674,1.41679406364623,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.393419540227666,0,0.411202997999018,1.00311897234407,0.32592226663359,0.473447805734733,0,0.779873198196215,0.294605907474837,0.221533894583621,0,0.384273959177026,0.520237390239513,0.164437904603676,0,0.289803085735052,0.741432815810302,0.267540828089713,2.09071047609954,0.226618685395132,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.903450714466637,0.895906278080929,0,0.236777252044017,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.523916301990851,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0,0,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0.735326160691737,0,0.535798369704479,0,0.563057402416611,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0.622422070799533,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.276149695926898,0.484938170456436,0,0.10075209822764,0,0,0,0.286804595389004,0.243947412259191,0.397589304964456,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0.231860809950154,0,0.288732895522148,0,0.761016608938393,0,0,0.246217006087397,0,0,0,0.335964256397719,0,0,0,0,0.985326475791887,0.352193736052904,0.414656231081544,1.58531948758658,1.13618190083742,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0.985153801009636,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.483437798366489,0.200506470303285,0,0,0,0,0,0.385076685522074,0,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,0.656029291399411,0,0.206082023295445,0.457847324091717,0.990113999047056,0,0,0,0,0,0,0,0.107420244868274,0,0,0.356128142586949,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0.797131363644112,0.199579371432817,0,1.2700414963433,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.586164286206121,0.278406173895242,0,0,0.66614393599564,0,0.748562161632879,0.146508179271894,0,1.5602073798847,0,0,0.296964680832639,0,0.994147647766298,1.26602474769461,0.556543525114529,0.329607748453519,0,0.19924798825107,0.276283915531148,1.76352923497993,1.63629892003448,1.23084805461069,0,0.269605053441981,0,0,0.394573622547734,0,0,1.93866549219044,0.74214478529481,0,0,0.699679999969566,0.724999575434793,0.1137934482855,0.762760950878299,0,1.03423011972439,0.583209226766509,0.868124974666461,1.77148277162768,1.80894657938112,3.05163472634166,2.43274371848694,0.886642856860642,0.438770794307945,0,0.139423744278603,0.230850775511391,0.227884111694002,5.07240589653732,0.359030577639089,2.17294743844016,0,0,0,0,0,0.166211681900156,1.57916962432026,0.784250137270958,0.671286347903371,0.569261198172555,0.953619473882272,1.47698645169619,0,0.424059214301822,4.32777279484182,0.995261931078505,0.619202951523374,0,0,0.123563938946503,0,0.808813595768125,0.802577647298789,0.702793337176017,0,0.586993856796269,0,1.18375320854817,0,1.22429104652196,0.126373159256976,0.150323419414493,0.72581733978073,0,0.661983911750998,0,0,0.569219092059585,0,0,0.0979923974143777,0.783532859223623,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092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| ||
|short_description=p6@TNIK | |||
}} | }} |
Latest revision as of 17:20, 16 September 2015
Short description: | p6@TNIK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNIK_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_ENST00000341852, ENST00000369326, ENST00000436636, ENST00000538048, NM_001161560, NM_001161561, NM_001161562, NM_001161563, NM_001161564, NM_001161565, NM_001161566, NM_015028, NR_027767, uc003fhh.2, uc003fhi.2, uc003fhj.2, uc003fhk.2, uc003fhl.2, uc003fhm.2, uc003 |
EntrezGene: | TNIK |
HGNC: | 30765 |
UniProt: | F5H865Q9UKE5F5H5M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data