FFCP PHASE1:Hg19::chr4:176733842..176733855,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:176733842..176733855,- to FFCP PHASE1:Hg19::chr4:176733842..176733855,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=P51674 | |UniProt=P51674 | ||
|association_with_transcript=46bp_to_ENST00000393658_5end | |||
|cluster_id=chr4:176733842..176733855,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_16_at_GPM6A_5end | |||
|id=chr4:176733842..176733855,- | |||
|ontology_enrichment_celltype=CL:0000047!2.68e-09!8;CL:0002319!5.25e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.43e-08;6!CL:0000404;5.43e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.32e-10,8;CL:0000540,5.64e-08,6;CL:0000031,5.64e-08,6;CL:0000404,5.64e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.44e-11;82!CL:0000031;5.43e-08;6!UBERON:0006215;5.59e-08;3!UBERON:0006241;8.18e-08;3!UBERON:0003057;8.18e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.39e-100!82;UBERON:0005743!2.43e-98!86;UBERON:0000073!3.53e-98!94;UBERON:0001016!3.53e-98!94;UBERON:0001049!3.75e-94!57;UBERON:0005068!3.75e-94!57;UBERON:0006241!3.75e-94!57;UBERON:0007135!3.75e-94!57;UBERON:0000955!3.01e-82!69;UBERON:0006238!3.01e-82!69;UBERON:0002616!5.19e-78!59;UBERON:0001893!1.10e-66!34;UBERON:0002020!1.28e-66!34;UBERON:0003528!1.28e-66!34;UBERON:0002780!1.50e-66!41;UBERON:0001890!1.50e-66!41;UBERON:0006240!1.50e-66!41;UBERON:0001869!1.52e-66!32;UBERON:0003080!8.63e-65!42;UBERON:0003075!1.25e-64!86;UBERON:0007284!1.25e-64!86;UBERON:0002791!6.13e-64!33;UBERON:0002346!2.98e-61!90;UBERON:0002619!5.43e-55!22;UBERON:0000956!1.64e-52!25;UBERON:0000203!1.64e-52!25;UBERON:0001950!1.86e-49!20;UBERON:0004121!2.65e-49!169;UBERON:0000924!7.25e-48!173;UBERON:0006601!7.25e-48!173;UBERON:0000033!1.13e-45!123;UBERON:0003056!7.18e-45!61;UBERON:0000153!5.23e-43!129;UBERON:0007811!5.23e-43!129;UBERON:0007023!2.82e-41!115;UBERON:0003076!3.27e-29!15;UBERON:0003057!3.27e-29!15;UBERON:0004732!4.28e-24!13;UBERON:0004733!1.46e-21!12;UBERON:0002028!1.46e-21!12;UBERON:0007277!1.46e-21!12;UBERON:0000025!9.08e-20!194;UBERON:0000200!7.89e-19!6;UBERON:0001871!1.39e-18!7;UBERON:0002420!8.93e-16!9;UBERON:0007245!8.93e-16!9;UBERON:0010009!8.93e-16!9;UBERON:0010011!8.93e-16!9;UBERON:0000454!8.93e-16!9;UBERON:0000349!1.48e-15!5;UBERON:0002021!1.72e-15!5;UBERON:0002308!2.56e-15!9;UBERON:0000125!2.56e-15!9;UBERON:0002680!8.57e-15!9;UBERON:0001895!8.57e-15!9;UBERON:0010092!8.57e-15!9;UBERON:0004111!9.49e-14!241;UBERON:0000369!1.09e-12!4;UBERON:0002435!1.09e-12!4;UBERON:0000204!1.09e-12!4;UBERON:0010082!1.09e-12!4;UBERON:0002298!7.49e-12!8;UBERON:0000064!1.46e-11!219;UBERON:0009663!1.08e-10!7;UBERON:0000477!1.17e-10!286;UBERON:0002771!1.73e-10!3;UBERON:0001872!2.78e-10!5;UBERON:0005383!8.67e-10!3;UBERON:0005382!8.67e-10!3;UBERON:0000483!1.13e-09!309;UBERON:0002240!1.39e-09!3;UBERON:0000475!1.52e-09!365;UBERON:0000119!1.78e-09!312;UBERON:0000988!4.97e-09!3;UBERON:0001896!1.12e-08!3;UBERON:0005290!1.12e-08!3;UBERON:0010096!1.12e-08!3;UBERON:0002037!5.28e-08!6;UBERON:0006215!5.28e-08!6;UBERON:0001870!2.01e-07!2;UBERON:0000922!2.99e-07!612;UBERON:0001876!3.50e-07!2;UBERON:0001954!3.83e-07!2;UBERON:0003022!3.83e-07!2;UBERON:0002421!3.83e-07!2;UBERON:0002600!3.83e-07!2;UBERON:0001873!5.83e-07!2;UBERON:0010122!5.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.57e-78;22!UBERON:0001950;1.39e-68;20!UBERON:0001869;1.70e-68;32!UBERON:0000956;1.99e-68;25!UBERON:0000203;1.99e-68;25!UBERON:0002791;1.29e-64;32!UBERON:0001893;5.10e-61;34!UBERON:0003528;1.04e-56;34!UBERON:0002020;1.04e-56;34!UBERON:0002780;1.16e-47;41!UBERON:0001890;1.16e-47;41!UBERON:0000073;2.52e-35;53!UBERON:0002616;2.52e-35;53!UBERON:0000200;5.07e-31;6!UBERON:0000955;2.60e-26;68!UBERON:0001017;3.54e-26;75!UBERON:0002021;8.16e-26;5!UBERON:0001016;8.14e-25;83!UBERON:0000349;5.38e-17;5!UBERON:0001872;8.46e-17;5!UBERON:0001870;1.56e-16;3!UBERON:0001871;1.00e-12;6!UBERON:0000369;3.16e-12;4!UBERON:0002435;3.16e-12;4!UBERON:0000204;3.16e-12;4!UBERON:0002771;5.90e-12;2!UBERON:0002702;1.03e-11;2!UBERON:0001954;3.84e-11;2!UBERON:0003022;3.84e-11;2!UBERON:0002421;3.84e-11;2!UBERON:0002600;3.84e-11;2!UBERON:0011216;5.25e-11;132!UBERON:0007023;5.66e-10;114!UBERON:0002420;1.70e-09;9!UBERON:0007245;1.70e-09;9!UBERON:0010009;1.70e-09;9!UBERON:0010011;1.70e-09;9!UBERON:0000454;1.70e-09;9!UBERON:0002240;8.18e-08;3!UBERON:0005174;8.18e-08;3!UBERON:0001137;8.18e-08;3!UBERON:0005383;1.04e-07;3!UBERON:0005382;1.04e-07;3!UBERON:0010314;3.20e-07;132!UBERON:0009663;3.52e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.08e-78,32;UBERON:0002619,1.17e-77,22;UBERON:0001893,1.23e-73,34;UBERON:0002791,1.31e-71,32;UBERON:0001017,6.14e-70,81;UBERON:0001950,2.44e-68,20;UBERON:0000956,3.30e-68,25;UBERON:0000203,3.30e-68,25;UBERON:0003528,3.09e-67,34;UBERON:0002020,3.09e-67,34;UBERON:0001016,2.79e-66,89;UBERON:0002780,5.01e-66,41;UBERON:0001890,5.01e-66,41;UBERON:0003080,5.01e-66,41;UBERON:0006240,5.01e-66,41;UBERON:0001049,1.45e-65,56;UBERON:0005068,1.45e-65,56;UBERON:0006241,1.45e-65,56;UBERON:0007135,1.45e-65,56;UBERON:0000073,1.87e-59,53;UBERON:0002616,1.87e-59,53;UBERON:0000955,1.79e-52,68;UBERON:0006238,1.79e-52,68;UBERON:0003056,8.09e-47,61;UBERON:0003075,1.74e-46,82;UBERON:0007284,1.74e-46,82;UBERON:0002346,4.55e-44,86;UBERON:0010371,1.84e-35,104;UBERON:0004121,7.34e-32,171;UBERON:0000924,7.34e-32,171;UBERON:0006601,7.34e-32,171;UBERON:0000200,3.26e-31,6;UBERON:0010314,6.82e-29,132;UBERON:0007023,5.49e-27,114;UBERON:0011216,3.21e-26,223;UBERON:0002021,1.82e-25,5;UBERON:0000349,5.28e-17,5;UBERON:0001872,8.66e-17,5;UBERON:0001870,1.52e-16,3;UBERON:0000025,3.94e-15,192;UBERON:0001871,1.00e-12,6;UBERON:0000369,2.28e-12,4;UBERON:0002435,2.28e-12,4;UBERON:0000204,2.28e-12,4;UBERON:0010082,2.28e-12,4;UBERON:0002771,6.07e-12,2;UBERON:0002702,1.09e-11,2;UBERON:0001954,3.84e-11,2;UBERON:0003022,3.84e-11,2;UBERON:0002421,3.84e-11,2;UBERON:0002600,3.84e-11,2;UBERON:0004111,6.36e-11,240;UBERON:0002420,1.41e-09,9;UBERON:0007245,1.41e-09,9;UBERON:0010009,1.41e-09,9;UBERON:0010011,1.41e-09,9;UBERON:0000454,1.41e-09,9;UBERON:0000483,4.42e-08,306;UBERON:0000119,6.06e-08,309;UBERON:0002240,7.14e-08,3;UBERON:0005174,7.14e-08,3;UBERON:0001137,7.14e-08,3;UBERON:0005383,7.91e-08,3;UBERON:0005382,7.91e-08,3;UBERON:0009663,2.94e-07,7;UBERON:0002022,9.67e-07,1 | |||
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| ||
|short_description=p16@GPM6A | |||
}} | }} |
Latest revision as of 21:54, 16 September 2015
Short description: | p16@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GPM6A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 46bp_to_ENST00000393658_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.32e-10 | 8 |
neuron | 5.64e-08 | 6 |
neuroblast | 5.64e-08 | 6 |
electrically signaling cell | 5.64e-08 | 6 |