FFCP PHASE1:Hg19::chr6:138192656..138192663,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:138192656..138192663,+ to FFCP PHASE1:Hg19::chr6:138192656..138192663,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=D3TTY4,D3TTY5,D3TTY6,D3TTY7,D3TTY8,D3TTY9,D3TTZ0,D3TTZ1,D3TTZ2,D3TTZ3,D3TTZ4,D3TTZ5,D3TTZ6,D3TTZ7,D3TTZ8 | |UniProt=D3TTY4,D3TTY5,D3TTY6,D3TTY7,D3TTY8,D3TTY9,D3TTZ0,D3TTZ1,D3TTZ2,D3TTZ3,D3TTZ4,D3TTZ5,D3TTZ6,D3TTZ7,D3TTZ8 | ||
|association_with_transcript=291bp_to_AB587366,CU687932,FJ434402,FJ434405,FJ434406,FJ434407,FJ434408,FJ434409,FJ434410,FJ434411,FJ434412,FJ434413,FJ434414,FJ434415,FJ434417,FJ434418,FJ434419_5end | |||
|cluster_id=chr6:138192656..138192663,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_22_at_TNFAIP3_5end | |||
|id=chr6:138192656..138192663,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.59e-39!140;CL:0000988!6.30e-30!182;CL:0002087!3.61e-29!119;CL:0000037!8.68e-29!172;CL:0000566!8.68e-29!172;CL:0002031!6.11e-26!124;CL:0002032!2.14e-25!165;CL:0000837!2.14e-25!165;CL:0002057!1.91e-24!42;CL:0000766!1.12e-22!76;CL:0000860!2.54e-22!45;CL:0000839!2.18e-15!70;CL:0000557!4.58e-15!71;CL:0002194!6.67e-15!63;CL:0000576!6.67e-15!63;CL:0000040!6.67e-15!63;CL:0000559!6.67e-15!63;CL:0000763!2.53e-14!112;CL:0000049!2.53e-14!112;CL:0002009!3.11e-14!65;CL:0000624!2.50e-13!6;CL:0000080!2.50e-12!6;CL:0000838!2.98e-11!52;CL:0000134!4.16e-11!358;CL:0000542!6.12e-11!53;CL:0000051!6.12e-11!53;CL:0002320!1.43e-10!365;CL:0000791!1.79e-10!18;CL:0000789!1.79e-10!18;CL:0002420!1.79e-10!18;CL:0002419!1.79e-10!18;CL:0000790!1.79e-10!18;CL:0000094!2.63e-10!8;CL:0000081!1.67e-09!11;CL:0000219!1.06e-08!390;CL:0000775!3.02e-08!3;CL:0000723!5.65e-08!436;CL:0000623!5.84e-08!3;CL:0000825!5.84e-08!3;CL:0000034!1.58e-07!444;CL:0000842!1.88e-07!3;CL:0000048!2.02e-07!430;CL:0000898!5.66e-07!3;CL:0000084!6.54e-07!25;CL:0000827!6.54e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.02e-24;3!CL:0000623;1.71e-23;3!CL:0000094;4.79e-16;8!CL:0002393;6.86e-12;6!CL:0002397;6.86e-12;6!CL:0000081;1.02e-11;11!CL:0002087;1.09e-08;104!CL:0000766;9.75e-08;69!CL:0000738;1.28e-07;136!CL:0000576;1.30e-07;48!CL:0000860;3.01e-07;33!CL:0002057;3.01e-07;33!CL:0000791;3.47e-07;18!CL:0000789;3.47e-07;18!CL:0002419;3.47e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.12e-26,136;CL:0000775,1.20e-24,3;CL:0000623,1.17e-23,3;CL:0000825,1.17e-23,3;CL:0002087,1.27e-20,115;CL:0000037,1.94e-20,168;CL:0002032,1.86e-19,161;CL:0000837,1.86e-19,161;CL:0000988,3.29e-19,177;CL:0002031,1.85e-17,120;CL:0000094,5.49e-16,8;CL:0000766,1.02e-15,72;CL:0000860,1.11e-13,42;CL:0002057,1.11e-13,42;CL:0000473,8.43e-12,48;CL:0000234,8.43e-12,48;CL:0000081,1.12e-11,11;CL:0000838,1.13e-10,52;CL:0000542,1.90e-10,53;CL:0000051,1.90e-10,53;CL:0000763,9.48e-10,108;CL:0000049,9.48e-10,108;CL:0002194,3.61e-09,59;CL:0000576,3.61e-09,59;CL:0000040,3.61e-09,59;CL:0000559,3.61e-09,59;CL:0002009,7.90e-09,61;CL:0002393,3.21e-08,9;CL:0002397,3.21e-08,9;CL:0000839,4.55e-08,66;CL:0000557,6.26e-08,67;CL:0000134,1.27e-07,354;CL:0002320,2.15e-07,361;CL:0000791,3.50e-07,18;CL:0000789,3.50e-07,18;CL:0002420,3.50e-07,18;CL:0002419,3.50e-07,18;CL:0000790,3.50e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-10;42!CL:0000790;3.47e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-17!102;UBERON:0003061!2.71e-17!102;UBERON:0002193!5.80e-16!112;UBERON:0002371!1.52e-12!80;UBERON:0001474!3.63e-11!86;UBERON:0002384!7.67e-10!375;UBERON:0002405!1.58e-09!115;UBERON:0004765!1.75e-08!101;UBERON:0001434!1.75e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.39e-07,371;UBERON:0002371,7.60e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0.786728553697808,0.767658796194425,0,0,0,0,0.0774672005803016,0,0,1.66198622559563,1.80490002723128,1.95309783644267,0,0,0,0,0,0.485168122375632,0.697287110717054,0.411167888021826,0,0.863077176966451,0.768482119587302,0.709446689665756,2.41321976515633,0,0,0.752969358170419,0,0.898893937780338,0.612167784741805,0.962787081228281,1.91801137739712,0,0.199463657621632,0,7.83564944297177,0,2.4912889959823,0.502497330513487,2.08593167368081,0.434377689410233,4.84319602106695,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76171156811282,1.14681968437569,0,0,0,0.983548850569165,8.25322601773246,3.90642848099067,0,0.651844533267181,0,0,0,0.589211814949674,0.221533894583621,1.08321545506006,0,0,0,0,0,0.444859689486181,0,0,0,0.383220493601921,1.03088233644789,1.01207876807801,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,3.7441627409691,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.72502059887614,2.31017465303547,0,0,0,0,0,11.9841123831549,14.9580729602012,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0.522109747527277,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0.786728553697808,0.767658796194425,0,0,0,0,0.0774672005803016,0,0,1.66198622559563,1.80490002723128,1.95309783644267,0,0,0,0,0,0.485168122375632,0.697287110717054,0.411167888021826,0,0.863077176966451,0.768482119587302,0.709446689665756,2.41321976515633,0,0,0.752969358170419,0,0.898893937780338,0.612167784741805,0.962787081228281,1.91801137739712,0,0.199463657621632,0,7.83564944297177,0,2.4912889959823,0.502497330513487,2.08593167368081,0.434377689410233,4.84319602106695,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76171156811282,1.14681968437569,0,0,0,0.983548850569165,8.25322601773246,3.90642848099067,0,0.651844533267181,0,0,0,0.589211814949674,0.221533894583621,1.08321545506006,0,0,0,0,0,0.444859689486181,0,0,0,0.383220493601921,1.03088233644789,1.01207876807801,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,3.7441627409691,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.72502059887614,2.31017465303547,0,0,0,0,0,11.9841123831549,14.9580729602012,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0.522109747527277,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p22@TNFAIP3 | |||
}} | }} |
Latest revision as of 03:31, 25 September 2015
Short description: | p22@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TNFAIP3_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 291bp_to_AB587366, CU687932, FJ434402, FJ434405, FJ434406, FJ434407, FJ434408, FJ434409, FJ434410, FJ434411, FJ434412, FJ434413, FJ434414, FJ434415, FJ434417, FJ434418, FJ434419_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | D3TTY4D3TTY5D3TTY6D3TTY7D3TTY8D3TTY9D3TTZ0D3TTZ1D3TTZ2D3TTZ3D3TTZ4D3TTZ5D3TTZ6D3TTZ7D3TTZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.39e-07 | 371 |
bone marrow | 7.60e-07 | 76 |