FFCP PHASE1:Hg19::chrX:137793495..137793521,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:137793495..137793521,- to FFCP PHASE1:Hg19::chrX:137793495..137793521,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2258 | |EntrezGene=2258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3670 | |HGNC=3670 | ||
|TSSclassifier=strong | |||
|UniProt=Q92913,A8K1P5 | |UniProt=Q92913,A8K1P5 | ||
|association_with_transcript=305bp_to_ENST00000315930,NM_004114,uc004fam.2_5end | |||
|cluster_id=chrX:137793495..137793521,- | |||
|description=CAGE_peak_4_at_FGF13_5end | |||
|id=chrX:137793495..137793521,- | |||
|ontology_enrichment_celltype=CL:0002322!9.19e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.61e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.21e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.01e-11;82!UBERON:0004872;1.16e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.14e-59!115;UBERON:0001049!3.77e-44!57;UBERON:0005068!3.77e-44!57;UBERON:0006241!3.77e-44!57;UBERON:0007135!3.77e-44!57;UBERON:0002780!1.45e-42!41;UBERON:0001890!1.45e-42!41;UBERON:0006240!1.45e-42!41;UBERON:0003080!3.19e-41!42;UBERON:0005743!3.41e-41!86;UBERON:0001017!9.33e-41!82;UBERON:0002020!2.46e-40!34;UBERON:0003528!2.46e-40!34;UBERON:0001893!1.00e-39!34;UBERON:0002791!2.09e-38!33;UBERON:0001869!2.91e-38!32;UBERON:0000073!3.93e-38!94;UBERON:0001016!3.93e-38!94;UBERON:0002616!2.36e-36!59;UBERON:0003075!3.32e-34!86;UBERON:0007284!3.32e-34!86;UBERON:0000955!1.46e-33!69;UBERON:0006238!1.46e-33!69;UBERON:0002346!5.09e-33!90;UBERON:0000956!1.03e-30!25;UBERON:0000203!1.03e-30!25;UBERON:0002619!5.32e-29!22;UBERON:0003056!1.89e-28!61;UBERON:0001950!1.04e-26!20;UBERON:0004121!2.64e-21!169;UBERON:0000924!5.14e-21!173;UBERON:0006601!5.14e-21!173;UBERON:0000033!5.39e-21!123;UBERON:0000153!7.84e-21!129;UBERON:0007811!7.84e-21!129;UBERON:0002308!6.15e-11!9;UBERON:0000125!6.15e-11!9;UBERON:0001871!7.49e-11!7;UBERON:0002420!7.51e-11!9;UBERON:0007245!7.51e-11!9;UBERON:0010009!7.51e-11!9;UBERON:0010011!7.51e-11!9;UBERON:0000454!7.51e-11!9;UBERON:0000468!3.01e-10!659;UBERON:0000025!6.04e-10!194;UBERON:0000064!7.71e-10!219;UBERON:0004111!8.38e-10!241;UBERON:0000922!8.95e-10!612;UBERON:0003135!4.16e-09!11;UBERON:0000477!4.78e-09!286;UBERON:0000200!1.09e-08!6;UBERON:0000062!1.22e-08!511;UBERON:0000481!1.55e-08!347;UBERON:0009663!2.10e-08!7;UBERON:0002021!8.01e-08!5;UBERON:0002298!8.04e-08!8;UBERON:0001872!1.05e-07!5;UBERON:0000349!1.42e-07!5;UBERON:0000467!1.73e-07!625;UBERON:0000480!2.03e-07!626;UBERON:0002050!4.36e-07!605;UBERON:0005423!4.36e-07!605;UBERON:0000475!4.43e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.29e-47;22!UBERON:0001950;2.87e-47;20!UBERON:0001869;1.46e-42;32!UBERON:0003528;3.50e-42;34!UBERON:0002020;3.50e-42;34!UBERON:0000956;3.82e-41;25!UBERON:0000203;3.82e-41;25!UBERON:0002791;1.80e-39;32!UBERON:0001893;2.90e-38;34!UBERON:0002780;2.63e-34;41!UBERON:0001890;2.63e-34;41!UBERON:0000073;5.61e-25;53!UBERON:0002616;5.61e-25;53!UBERON:0000955;2.01e-20;68!UBERON:0001017;1.05e-19;75!UBERON:0001871;2.29e-16;6!UBERON:0000200;2.65e-14;6!UBERON:0001016;2.76e-14;83!UBERON:0000922;9.48e-14;49!UBERON:0001872;7.06e-13;5!UBERON:0002021;1.01e-12;5!UBERON:0000125;2.51e-09;9!UBERON:0002308;2.51e-09;9!UBERON:0002420;4.45e-09;9!UBERON:0007245;4.45e-09;9!UBERON:0010009;4.45e-09;9!UBERON:0010011;4.45e-09;9!UBERON:0000454;4.45e-09;9!UBERON:0007023;4.71e-09;114!UBERON:0000349;1.39e-08;5!UBERON:0001870;9.47e-08;3!UBERON:0002298;3.12e-07;6!UBERON:0001905;8.12e-07;2!UBERON:0002757;8.12e-07;2!UBERON:0010134;8.12e-07;2!UBERON:0005408;8.12e-07;2!UBERON:0001899;8.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.40e-49,41;UBERON:0001890,2.40e-49,41;UBERON:0003080,2.40e-49,41;UBERON:0006240,2.40e-49,41;UBERON:0003528,4.53e-49,34;UBERON:0002020,4.53e-49,34;UBERON:0001869,1.92e-48,32;UBERON:0000073,4.69e-48,53;UBERON:0002616,4.69e-48,53;UBERON:0001049,5.24e-48,56;UBERON:0005068,5.24e-48,56;UBERON:0006241,5.24e-48,56;UBERON:0007135,5.24e-48,56;UBERON:0002619,6.81e-48,22;UBERON:0001950,7.97e-48,20;UBERON:0001017,3.65e-47,81;UBERON:0001893,3.27e-45,34;UBERON:0002791,1.64e-44,32;UBERON:0001016,2.36e-43,89;UBERON:0000955,2.52e-42,68;UBERON:0006238,2.52e-42,68;UBERON:0000956,1.32e-41,25;UBERON:0000203,1.32e-41,25;UBERON:0003075,1.63e-33,82;UBERON:0007284,1.63e-33,82;UBERON:0003056,1.08e-32,61;UBERON:0002346,1.80e-31,86;UBERON:0007023,6.82e-29,114;UBERON:0010371,7.57e-26,104;UBERON:0011216,2.38e-22,223;UBERON:0004121,2.29e-20,171;UBERON:0000924,2.29e-20,171;UBERON:0006601,2.29e-20,171;UBERON:0010314,2.30e-19,132;UBERON:0001871,8.84e-17,6;UBERON:0000200,1.25e-14,6;UBERON:0002021,4.79e-13,5;UBERON:0001872,7.88e-13,5;UBERON:0000025,1.22e-12,192;UBERON:0000125,2.41e-09,9;UBERON:0002308,2.41e-09,9;UBERON:0004111,2.94e-09,240;UBERON:0002420,3.09e-09,9;UBERON:0007245,3.09e-09,9;UBERON:0010009,3.09e-09,9;UBERON:0010011,3.09e-09,9;UBERON:0000454,3.09e-09,9;UBERON:0000349,9.25e-09,5;UBERON:0000922,7.75e-08,592;UBERON:0001870,1.21e-07,3;UBERON:0002298,2.87e-07,6;UBERON:0001905,7.94e-07,2;UBERON:0002757,7.94e-07,2;UBERON:0010134,7.94e-07,2;UBERON:0005408,7.94e-07,2;UBERON:0001899,7.94e-07,2 | |||
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| ||
|short_description=p4@FGF13 | |||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p4@FGF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FGF13_5end |
Coexpression cluster: | NA |
Association with transcript: | 305bp_to_ENST00000315930, NM_004114, uc004fam.2_5end |
EntrezGene: | FGF13 |
HGNC: | 3670 |
UniProt: | Q92913A8K1P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic stem cell | 1.21e-07 | 5 |