FFCP PHASE1:Mm9::chr10:80500003..80500040,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:80500003..80500040,- to FFCP PHASE1:Mm9::chr10:80500003..80500040,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=106947 | |EntrezGene=106947 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000154877_5end | |||
|cluster_id=chr10:80500003..80500040,- | |||
|description=CAGE_peak_2_at_Slc39a3_5end | |||
|id=chr10:80500003..80500040,- | |||
|ontology_enrichment_celltype=CL:0000221!5.30e-18!44;CL:0000133!5.30e-18!44;CL:0002319!9.03e-18!43;CL:0000055!2.42e-17!50;CL:0000540!1.69e-15!33;CL:0000047!1.69e-15!33;CL:0000031!1.69e-15!33;CL:0000404!1.69e-15!33;CL:0000393!3.31e-15!39;CL:0000211!3.31e-15!39;CL:0000117!1.39e-14!23;CL:0000337!1.39e-14!23;CL:0002321!6.79e-09!70;CL:0000220!6.79e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.01e-18,44;CL:0000133,5.01e-18,44;CL:0002319,8.54e-18,43;CL:0000540,1.61e-15,33;CL:0000047,1.61e-15,33;CL:0000031,1.61e-15,33;CL:0000404,1.61e-15,33;CL:0000393,3.16e-15,39;CL:0000211,3.16e-15,39;CL:0000117,1.33e-14,23;CL:0000337,1.33e-14,23;CL:0002321,6.01e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-34!75;UBERON:0001016!1.14e-34!75;UBERON:0001017!5.30e-34!73;UBERON:0005743!5.30e-34!73;UBERON:0004121!1.23e-31!102;UBERON:0000924!1.23e-31!102;UBERON:0006601!1.23e-31!102;UBERON:0002346!2.35e-28!71;UBERON:0003075!2.35e-28!71;UBERON:0007284!2.35e-28!71;UBERON:0001049!5.15e-28!52;UBERON:0005068!5.15e-28!52;UBERON:0006241!5.15e-28!52;UBERON:0007135!5.15e-28!52;UBERON:0000955!5.02e-26!50;UBERON:0006238!5.02e-26!50;UBERON:0002616!7.21e-26!49;UBERON:0000033!2.36e-25!63;UBERON:0003080!3.47e-21!40;UBERON:0002780!1.01e-20!39;UBERON:0001890!1.01e-20!39;UBERON:0006240!1.01e-20!39;UBERON:0002020!1.60e-20!34;UBERON:0003056!1.77e-20!49;UBERON:0007811!1.39e-17!86;UBERON:0002791!3.23e-17!29;UBERON:0003528!3.23e-17!29;UBERON:0001893!3.23e-17!29;UBERON:0000153!1.08e-15!94;UBERON:0000956!2.18e-12!21;UBERON:0001869!2.18e-12!21;UBERON:0000203!2.18e-12!21;UBERON:0002619!2.87e-10!17;UBERON:0000025!1.78e-07!114;UBERON:0003076!2.82e-07!12;UBERON:0003057!2.82e-07!12;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10;UBERON:0004111!2.92e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.01e-34,75;UBERON:0001017,4.74e-34,73;UBERON:0004121,3.74e-30,95;UBERON:0000924,3.74e-30,95;UBERON:0006601,3.74e-30,95;UBERON:0000073,1.72e-29,54;UBERON:0001049,4.70e-28,52;UBERON:0005068,4.70e-28,52;UBERON:0006241,4.70e-28,52;UBERON:0007135,4.70e-28,52;UBERON:0002346,2.22e-27,64;UBERON:0003075,2.22e-27,64;UBERON:0007284,2.22e-27,64;UBERON:0000955,2.76e-24,47;UBERON:0006238,2.76e-24,47;UBERON:0002616,3.91e-24,46;UBERON:0010371,2.15e-23,73;UBERON:0003080,3.24e-21,40;UBERON:0002780,9.44e-21,39;UBERON:0001890,9.44e-21,39;UBERON:0006240,9.44e-21,39;UBERON:0002020,1.50e-20,34;UBERON:0003056,1.66e-20,49;UBERON:0010314,3.09e-20,92;UBERON:0003528,3.06e-17,29;UBERON:0002791,3.06e-17,29;UBERON:0001893,3.06e-17,29;UBERON:0000956,2.10e-12,21;UBERON:0001869,2.10e-12,21;UBERON:0000203,2.10e-12,21;UBERON:0002619,2.79e-10,17;UBERON:0000025,1.79e-07,114;UBERON:0003076,2.76e-07,12;UBERON:0003057,2.76e-07,12;UBERON:0002021,2.78e-07,10;UBERON:0000411,2.78e-07,10;UBERON:0001950,2.78e-07,10;UBERON:0004111,2.94e-07,122 | |||
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| ||
|short_description=p2@Slc39a3 | |||
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Latest revision as of 10:34, 26 September 2015
Short description: | p2@Slc39a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc39a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000154877_5end |
EntrezGene: | Slc39a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.01e-18 | 44 |
neurectodermal cell | 5.01e-18 | 44 |
neural cell | 8.54e-18 | 43 |
neuron | 1.61e-15 | 33 |
neuronal stem cell | 1.61e-15 | 33 |
neuroblast | 1.61e-15 | 33 |
electrically signaling cell | 1.61e-15 | 33 |
electrically responsive cell | 3.16e-15 | 39 |
electrically active cell | 3.16e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.33e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-14 | 23 |
embryonic cell | 6.01e-09 | 70 |