FFCP PHASE1:Mm9::chr11:101303726..101303753,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:101303726..101303753,+ to FFCP PHASE1:Mm9::chr11:101303726..101303753,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19942,622673 | |EntrezGene=19942,622673 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000139939_5end | |||
|cluster_id=chr11:101303726..101303753,+ | |||
|description=CAGE_peak_2_at_Gm6341_5end,CAGE_peak_2_at_Rpl27_5end | |||
|id=chr11:101303726..101303753,+ | |||
|ontology_enrichment_celltype=CL:0000034!1.23e-16!97;CL:0000144!2.95e-16!121;CL:0000012!2.95e-16!121;CL:0000988!3.03e-15!32;CL:0002032!3.03e-15!32;CL:0000037!3.03e-15!32;CL:0000566!3.03e-15!32;CL:0000837!3.03e-15!32;CL:0002371!1.36e-14!118;CL:0000723!2.74e-14!91;CL:0000048!2.74e-14!91;CL:0000063!3.11e-14!66;CL:0000548!2.25e-13!115;CL:0000004!2.25e-13!115;CL:0000255!2.25e-13!115;CL:0002320!1.76e-12!46;CL:0000134!1.76e-12!46;CL:0002031!1.46e-11!25;CL:0000219!1.42e-10!54;CL:0000838!1.36e-08!12;CL:0000542!2.03e-08!13;CL:0000051!2.03e-08!13;CL:0000049!3.95e-08!19;CL:0000084!5.95e-08!11;CL:0000827!5.95e-08!11;CL:0000791!3.37e-07!9;CL:0000789!3.37e-07!9;CL:0002420!3.37e-07!9;CL:0002419!3.37e-07!9;CL:0000790!3.37e-07!9;CL:0000738!5.48e-07!17;CL:0002087!5.48e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.23e-16,97;CL:0000988,3.03e-15,32;CL:0002032,3.03e-15,32;CL:0000037,3.03e-15,32;CL:0000837,3.03e-15,32;CL:0000723,2.74e-14,91;CL:0000048,2.74e-14,91;CL:0002320,1.76e-12,46;CL:0000134,1.76e-12,46;CL:0002031,1.46e-11,25;CL:0000219,1.42e-10,54;CL:0000838,1.36e-08,12;CL:0000542,2.03e-08,13;CL:0000051,2.03e-08,13;CL:0000049,3.95e-08,19;CL:0000084,5.95e-08,11;CL:0000827,5.95e-08,11;CL:0000791,3.37e-07,9;CL:0000789,3.37e-07,9;CL:0002420,3.37e-07,9;CL:0002419,3.37e-07,9;CL:0000790,3.37e-07,9;CL:0000738,5.48e-07,17;CL:0002087,5.48e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.76e-12!46;UBERON:0002390!2.04e-07!45;UBERON:0003061!2.04e-07!45;UBERON:0002193!4.45e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.76e-12,46;UBERON:0002390,2.04e-07,45;UBERON:0003061,2.04e-07,45;UBERON:0002193,4.43e-07,48;UBERON:0002405,4.43e-07,48 | |||
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| ||
|short_description=p2@Gm6341,p2@Rpl27 | |||
}} | }} |
Latest revision as of 17:27, 26 September 2015
Short description: | p2@Gm6341, p2@Rpl27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm6341_5end, CAGE_peak_2_at_Rpl27_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000139939_5end |
EntrezGene: | 19942,622673 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.23e-16 | 97 |
hematopoietic cell | 3.03e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.03e-15 | 32 |
hematopoietic stem cell | 3.03e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.03e-15 | 32 |
somatic stem cell | 2.74e-14 | 91 |
multi fate stem cell | 2.74e-14 | 91 |
connective tissue cell | 1.76e-12 | 46 |
mesenchymal cell | 1.76e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.46e-11 | 25 |
motile cell | 1.42e-10 | 54 |
lymphoid lineage restricted progenitor cell | 1.36e-08 | 12 |
lymphocyte | 2.03e-08 | 13 |
common lymphoid progenitor | 2.03e-08 | 13 |
common myeloid progenitor | 3.95e-08 | 19 |
T cell | 5.95e-08 | 11 |
pro-T cell | 5.95e-08 | 11 |
mature alpha-beta T cell | 3.37e-07 | 9 |
alpha-beta T cell | 3.37e-07 | 9 |
immature T cell | 3.37e-07 | 9 |
mature T cell | 3.37e-07 | 9 |
immature alpha-beta T cell | 3.37e-07 | 9 |
leukocyte | 5.48e-07 | 17 |
nongranular leukocyte | 5.48e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.76e-12 | 46 |
hematopoietic system | 2.04e-07 | 45 |
blood island | 2.04e-07 | 45 |
hemolymphoid system | 4.43e-07 | 48 |
immune system | 4.43e-07 | 48 |