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FFCP PHASE1:Mm9::chr12:56937304..56937317,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:56937304..56937317,+
|DHSsupport=NA
|short_description=p3@Brms1l
|DPIdataset=NA
|description=CAGE_peak_3_at_Brms1l_5end
|association_with_transcript=-35bp_to_ENSMUST00000012220,ENSMUST00000059250,NM_001037756,uc007noz.1,uc007npa.1_5end
|EntrezGene=52592
|EntrezGene=52592
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3U1T3
|UniProt=Q3U1T3
|association_with_transcript=-35bp_to_ENSMUST00000012220,ENSMUST00000059250,NM_001037756,uc007noz.1,uc007npa.1_5end
|cluster_id=chr12:56937304..56937317,+
|description=CAGE_peak_3_at_Brms1l_5end
|id=chr12:56937304..56937317,+
|ontology_enrichment_celltype=CL:0000117!1.14e-09!23;CL:0000337!1.14e-09!23;CL:0000540!4.39e-07!33;CL:0000047!4.39e-07!33;CL:0000031!4.39e-07!33;CL:0000404!4.39e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.29e-11,23;CL:0000337,4.29e-11,23;CL:0000540,3.30e-07,33;CL:0000047,3.30e-07,33;CL:0000031,3.30e-07,33;CL:0000404,3.30e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.65e-14!71;UBERON:0003075!9.65e-14!71;UBERON:0007284!9.65e-14!71;UBERON:0002020!1.15e-13!34;UBERON:0001049!1.46e-13!52;UBERON:0005068!1.46e-13!52;UBERON:0006241!1.46e-13!52;UBERON:0007135!1.46e-13!52;UBERON:0000955!3.68e-13!50;UBERON:0006238!3.68e-13!50;UBERON:0001017!5.04e-13!73;UBERON:0005743!5.04e-13!73;UBERON:0002616!1.26e-12!49;UBERON:0000073!1.39e-12!75;UBERON:0001016!1.39e-12!75;UBERON:0002791!6.26e-12!29;UBERON:0003528!6.26e-12!29;UBERON:0001893!6.26e-12!29;UBERON:0003080!2.45e-11!40;UBERON:0003056!2.94e-11!49;UBERON:0000033!6.21e-11!63;UBERON:0002780!7.45e-11!39;UBERON:0001890!7.45e-11!39;UBERON:0006240!7.45e-11!39;UBERON:0004121!4.75e-10!102;UBERON:0000924!4.75e-10!102;UBERON:0006601!4.75e-10!102;UBERON:0000956!6.09e-09!21;UBERON:0001869!6.09e-09!21;UBERON:0000203!6.09e-09!21;UBERON:0000025!3.89e-07!114;UBERON:0002619!8.23e-07!17;UBERON:0002021!9.16e-07!10;UBERON:0000411!9.16e-07!10;UBERON:0001950!9.16e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.91e-17,54;UBERON:0002020,1.84e-16,34;UBERON:0001049,3.10e-16,52;UBERON:0005068,3.10e-16,52;UBERON:0006241,3.10e-16,52;UBERON:0007135,3.10e-16,52;UBERON:0001017,3.63e-15,73;UBERON:0002346,1.67e-14,64;UBERON:0003075,1.67e-14,64;UBERON:0007284,1.67e-14,64;UBERON:0003528,2.03e-14,29;UBERON:0002791,2.03e-14,29;UBERON:0001893,2.03e-14,29;UBERON:0001016,3.86e-14,75;UBERON:0000955,4.62e-14,47;UBERON:0006238,4.62e-14,47;UBERON:0010314,8.85e-14,92;UBERON:0002616,1.91e-13,46;UBERON:0003080,6.36e-13,40;UBERON:0002780,2.34e-12,39;UBERON:0001890,2.34e-12,39;UBERON:0006240,2.34e-12,39;UBERON:0003056,3.50e-12,49;UBERON:0000956,6.70e-11,21;UBERON:0001869,6.70e-11,21;UBERON:0000203,6.70e-11,21;UBERON:0010371,3.21e-10,73;UBERON:0004121,9.42e-10,95;UBERON:0000924,9.42e-10,95;UBERON:0006601,9.42e-10,95;UBERON:0002619,2.31e-08,17;UBERON:0000025,3.00e-08,114;UBERON:0002021,1.11e-07,10;UBERON:0000411,1.11e-07,10;UBERON:0001950,1.11e-07,10;UBERON:0004111,8.24e-07,122
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|phase1_expression=0.320297694209588,0.697950815278722,0.909998478779072,1.51232105653415,0.500895729946347,0.671517087647559,0,0.258246646883153,0.140788722151667,0.468129052643987,0.34243593645101,0.638177271962691,1.36960583944965,0.437102012094987,1.99865857089398,1.61980213911861,2.79824751251259,0.315462165358238,0.548457734422955,0.84877930359606,1.44573593256819,0.297872853602656,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0.861884930743556,0.570070258369122,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,1.02084678131185,0.418531630736908,0,0,0,0,0.485510353031154,0.881277725829041,0.811015449756117,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,2.87505128729943,1.8456086666351,1.45072428402269,0.672187598284928,0.771778308107841,0.85960031981627,1.03134418455488,1.21389876515759,1.5869729378161,3.80298842103708,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,2.17748185847803,3.24014251996058,2.94454945891935,1.71390590642282,2.42955395046775,1.95985278743926,2.01275489138296,1.83843757322004,2.20231761998777,2.042997409363,2.91852413186863,2.2420668914133,1.18933936683133,3.12548022334056,3.35019598801657,1.12552522006336,2.29197371665215,2.06240009831567,1.42371680799103,1.86399445825301,0.908714319998209,0.755715601067855,0,0,0,0,0.649776417447669,0.896053774194671,0.983110940922263,1.70430322578058,1.81850203222008,1.41335829804136,0.985903938436763,0,7.64415719119937,0,0.865964164044856,0,0.505524445014783,0.22836775943812,0.517875767294343,1.48442139064825,1.73485326766136,2.74018930480927,0.461230994512117,1.20578112442098,1.64624189989987,1.0053327306374,0.247194967734374,1.3013942122792,0,0.485300549842228,0.220841518460394,0.484875253135222,1.86391761218122,2.04946557908083,1.25668024088073,0.255457055208591,0,0.599902730993408,0.254140454146129,2.39665023047716,3.66000482254901,2.26177833803156,3.12883776346098,4.60287823194595,4.1557608911912,2.59586020908412,0.407357455401265,0.248813941220186,0.505445516867349,1.05220927943237,0.910843100738926,0.459804208866946,0.900310649026746,1.80845781402858,1.42876648217788,1.66547836370305,1.3118241438362,1.55222022443409,1.07783996466421,1.51284864134255,1.23165786914764,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0.995171334092466,0,0,0.284163499395593,1.03562886267751,1.87620847984877,1.44049649168812,1.65721314909647,1.18058539048442,1.07986979021165,1.39520366850245,1.87791380979733,1.28441876603886,0.658239399653922,1.47750717671186,1.37816976227955,1.02339991197733,0.439100230582101,0.939444931322602,4.41608891984667,4.52780294468852,0.660837565967596,0.264450566663544,1.91959425481711,0.928946687441754,1.54640953586512,0.80673409849337,0.22237804384487,1.14135375667535,0.949058123089023,0.164698954724011,0.502670417600539,0.795825888164603,0.974820435595601,0.898819408654221,1.08069024937347,0.796565093017469,0.948339504765408,1.14248512609729,1.1270773567308,2.03651327845314,1.16371492300575,0.631222379012867,0.822074982615345,0.590440591918409,0.941992367048249,0.493588655687202,0.296452627087149,1.16791574001266,1.57247196090562,1.34917267430912,1.42002084971952,1.20588579876208,1.01850340712568,0,0.486405680325106,1.09824565275233,0,0,0.624075346229121,0.252578877947112,0.538192240565737,0.964887042726734,0.554259570499814,1.32643988239339,1.46668478797823,1.52770577197669,2.11221223459652,1.34005005953453,0.952174563544055,1.36593553500459,1.26108115284953,1.55025282754142,0.956728611944923,1.80249646187312,0.863424909329478,0.723245292907558,0,0,0.983528546038072,0.551873492609465,4.49541651965817,3.16471553798949,1.47541450839008,0.757412781613119,0.631016438832513,0.780877488593277,1.29254038639679,0.955875191810208,0.222798674082394,2.83076530788832,1.61924280669958,0.876767573733936,0.790575555893047,2.89189184779626,1.27746076687442,1.24645922567079,0.651547837414304,1.15479086080775,0,1.21390318077491,0,0.754420319023592,1.18120757152309,0,0.775284879504663,1.45413491791002,0.712994756769443,0.316036757935816,0,0,1.36175842301515,2.16073312837572,0.646793418913773,0.214337035031592,0.886701168211368,0.535106452806212,1.31639216481697,0.913394847343798,1.87737366450968,1.48282449604674,1.10264199027481,0.49465875882444,0.161464426695906,0.904693873922338,0.477489376012546,0.492422699235184,0.874442509889552,4.07935664423121,0.170870880797853,1.44470807574256,1.29636169158798,2.0720530270516,1.23024804948923,0.915112692826091,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.609958401380546,0.540026704109006,0.418176592028937,0.655087691238533,0.809186078308924,0.743881101528023,1.04702376793612,0.388844919875379,0,1.69107881605257,1.04661582230785,0.66183396182839,2.33341426012857,0.645799117388655,1.520605129417,1.87771581833206,1.43224823328345,2.72634295506848,2.17425708743405,1.44015003128933,0.632022241256357,0.608175645870493,0.821687657318618,0.909445760844565,1.61124026100733,0.79472541912506,0.480781798079875,1.03382669022204,0.302899349844443,0.762068066549998,0.705783295957884,0.877120926657772,0.769694733122636,1.05189211963412,0,1.77588762699252,1.61484941897056,3.18980771091749,0.386379188064381,0.563047426353546,0.36630324853453,0.428736758158132,1.00314420807073,5.0827665835536,1.84130094602871,5.72895513439397,1.71853182343688,3.42541259885321,3.7769694869485,2.02506750069542,3.15224842256954,4.98456649882625,2.5888015587591,0.93408612825759,1.59609949360412,1.36586884603307,0.729320151204882,1.67690530102386,1.65459157605013,2.44471400581777,0.824140228955577,1.28367683836726,0.758091635291392,2.02783439912192,2.07488975524684,1.40462261204824,0.960377286073039,1.03383844120104,1.90517476513229,1.27472758539341,1.15745532278223,0.412085900803307,1.91358596174717,1.02860775715625,1.24233064311536,0.953744759789284,0.872078499793971,1.69396884747595,1.35383372626682,1.82927972872773,0.789209134313529,1.90125759384206,1.12228454331548,1.66089025373844,0.985044823755635,1.63692417267876,0.929621047115796,1.35034627686799,0.499621155875892,0.467863216890817,0.644613162144895,1.3390183244819,0.882365676478062,1.39120701372253
|short_description=p3@Brms1l
}}
}}

Latest revision as of 16:33, 26 September 2015

Short description:p3@Brms1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Brms1l_5end
Coexpression cluster:NA
Association with transcript: -35bp_to_ENSMUST00000012220, ENSMUST00000059250, NM_001037756, uc007noz.1, uc007npa.1_5end
EntrezGene:Brms1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Brms1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.29e-1123
neuroblast (sensu Vertebrata)4.29e-1123
neuron3.30e-0733
neuronal stem cell3.30e-0733
neuroblast3.30e-0733
electrically signaling cell3.30e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.91e-1754
gray matter1.84e-1634
neural tube3.10e-1652
neural rod3.10e-1652
future spinal cord3.10e-1652
neural keel3.10e-1652
central nervous system3.63e-1573
neurectoderm1.67e-1464
neural plate1.67e-1464
presumptive neural plate1.67e-1464
brain grey matter2.03e-1429
regional part of telencephalon2.03e-1429
telencephalon2.03e-1429
nervous system3.86e-1475
brain4.62e-1447
future brain4.62e-1447
structure with developmental contribution from neural crest8.85e-1492
regional part of brain1.91e-1346
anterior neural tube6.36e-1340
regional part of forebrain2.34e-1239
forebrain2.34e-1239
future forebrain2.34e-1239
pre-chordal neural plate3.50e-1249
cerebral cortex6.70e-1121
cerebral hemisphere6.70e-1121
pallium6.70e-1121
ecto-epithelium3.21e-1073
ectoderm-derived structure9.42e-1095
ectoderm9.42e-1095
presumptive ectoderm9.42e-1095
regional part of cerebral cortex2.31e-0817
tube3.00e-08114
occipital lobe1.11e-0710
visual cortex1.11e-0710
neocortex1.11e-0710
anatomical conduit8.24e-07122
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