FFCP PHASE1:Mm9::chr15:63829729..63829740,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:63829729..63829740,- to FFCP PHASE1:Mm9::chr15:63829729..63829740,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223601 | |EntrezGene=223601 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q921M7 | |UniProt=Q921M7 | ||
|association_with_transcript=-205bp_to_ENSMUST00000164532,uc007vze.2_5end | |||
|cluster_id=chr15:63829729..63829740,- | |||
|description=CAGE_peak_6_at_Fam49b_5end | |||
|id=chr15:63829729..63829740,- | |||
|ontology_enrichment_celltype=CL:0000117!8.08e-09!23;CL:0000337!8.08e-09!23;CL:0000540!2.65e-07!33;CL:0000047!2.65e-07!33;CL:0000031!2.65e-07!33;CL:0000404!2.65e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-10,23;CL:0000337,1.44e-10,23;CL:0000540,6.54e-07,33;CL:0000047,6.54e-07,33;CL:0000031,6.54e-07,33;CL:0000404,6.54e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.58e-15!34;UBERON:0001017!3.66e-15!73;UBERON:0005743!3.66e-15!73;UBERON:0000073!5.95e-15!75;UBERON:0001016!5.95e-15!75;UBERON:0001049!8.79e-15!52;UBERON:0005068!8.79e-15!52;UBERON:0006241!8.79e-15!52;UBERON:0007135!8.79e-15!52;UBERON:0000955!2.33e-14!50;UBERON:0006238!2.33e-14!50;UBERON:0002616!8.81e-14!49;UBERON:0002791!2.67e-13!29;UBERON:0003528!2.67e-13!29;UBERON:0001893!2.67e-13!29;UBERON:0003080!1.98e-12!40;UBERON:0000033!4.49e-12!63;UBERON:0002780!4.58e-12!39;UBERON:0001890!4.58e-12!39;UBERON:0006240!4.58e-12!39;UBERON:0000956!2.87e-11!21;UBERON:0001869!2.87e-11!21;UBERON:0000203!2.87e-11!21;UBERON:0003056!4.43e-11!49;UBERON:0004121!6.22e-11!102;UBERON:0000924!6.22e-11!102;UBERON:0006601!6.22e-11!102;UBERON:0002346!6.53e-11!71;UBERON:0003075!6.53e-11!71;UBERON:0007284!6.53e-11!71;UBERON:0002619!7.34e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.69e-21,54;UBERON:0002020,1.54e-19,34;UBERON:0001049,1.70e-19,52;UBERON:0005068,1.70e-19,52;UBERON:0006241,1.70e-19,52;UBERON:0007135,1.70e-19,52;UBERON:0000955,7.25e-18,47;UBERON:0006238,7.25e-18,47;UBERON:0002616,4.62e-17,46;UBERON:0001017,6.23e-17,73;UBERON:0003528,2.18e-16,29;UBERON:0002791,2.18e-16,29;UBERON:0001893,2.18e-16,29;UBERON:0003080,3.75e-16,40;UBERON:0001016,5.32e-16,75;UBERON:0002780,1.23e-15,39;UBERON:0001890,1.23e-15,39;UBERON:0006240,1.23e-15,39;UBERON:0002346,1.28e-15,64;UBERON:0003075,1.28e-15,64;UBERON:0007284,1.28e-15,64;UBERON:0000956,2.12e-14,21;UBERON:0001869,2.12e-14,21;UBERON:0000203,2.12e-14,21;UBERON:0003056,1.36e-12,49;UBERON:0010371,9.08e-12,73;UBERON:0002619,5.24e-11,17;UBERON:0004121,8.26e-11,95;UBERON:0000924,8.26e-11,95;UBERON:0006601,8.26e-11,95;UBERON:0002021,7.55e-09,10;UBERON:0000411,7.55e-09,10;UBERON:0001950,7.55e-09,10;UBERON:0010314,6.57e-07,92 | |||
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| ||
|short_description=p6@Fam49b | |||
}} | }} |
Latest revision as of 21:25, 26 September 2015
Short description: | p6@Fam49b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fam49b_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENSMUST00000164532, uc007vze.2_5end |
EntrezGene: | Fam49b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.44e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-10 | 23 |
neuron | 6.54e-07 | 33 |
neuronal stem cell | 6.54e-07 | 33 |
neuroblast | 6.54e-07 | 33 |
electrically signaling cell | 6.54e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.69e-21 | 54 |
gray matter | 1.54e-19 | 34 |
neural tube | 1.70e-19 | 52 |
neural rod | 1.70e-19 | 52 |
future spinal cord | 1.70e-19 | 52 |
neural keel | 1.70e-19 | 52 |
brain | 7.25e-18 | 47 |
future brain | 7.25e-18 | 47 |
regional part of brain | 4.62e-17 | 46 |
central nervous system | 6.23e-17 | 73 |
brain grey matter | 2.18e-16 | 29 |
regional part of telencephalon | 2.18e-16 | 29 |
telencephalon | 2.18e-16 | 29 |
anterior neural tube | 3.75e-16 | 40 |
nervous system | 5.32e-16 | 75 |
regional part of forebrain | 1.23e-15 | 39 |
forebrain | 1.23e-15 | 39 |
future forebrain | 1.23e-15 | 39 |
neurectoderm | 1.28e-15 | 64 |
neural plate | 1.28e-15 | 64 |
presumptive neural plate | 1.28e-15 | 64 |
cerebral cortex | 2.12e-14 | 21 |
cerebral hemisphere | 2.12e-14 | 21 |
pallium | 2.12e-14 | 21 |
pre-chordal neural plate | 1.36e-12 | 49 |
ecto-epithelium | 9.08e-12 | 73 |
regional part of cerebral cortex | 5.24e-11 | 17 |
ectoderm-derived structure | 8.26e-11 | 95 |
ectoderm | 8.26e-11 | 95 |
presumptive ectoderm | 8.26e-11 | 95 |
occipital lobe | 7.55e-09 | 10 |
visual cortex | 7.55e-09 | 10 |
neocortex | 7.55e-09 | 10 |
structure with developmental contribution from neural crest | 6.57e-07 | 92 |