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FFCP PHASE1:Mm9::chr16:5013598..5013651,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:5013598..5013651,-
|DHSsupport=NA
|short_description=p1@Rogdi
|DPIdataset=NA
|description=CAGE_peak_1_at_Rogdi_5end
|association_with_transcript=0bp_to_ENSMUST00000023191,ENSMUST00000090453,NM_133185,uc007ybk.1_5end
|EntrezGene=66049
|EntrezGene=66049
|HGNC=
|HGNC=
|MCL_coexpression_id=663
|TSSclassifier=NA
|UniProt=Q3TDK6
|UniProt=Q3TDK6
|association_with_transcript=0bp_to_ENSMUST00000023191,ENSMUST00000090453,NM_133185,uc007ybk.1_5end
|cluster_id=chr16:5013598..5013651,-
|description=CAGE_peak_1_at_Rogdi_5end
|id=chr16:5013598..5013651,-
|ontology_enrichment_celltype=CL:0000117!6.41e-08!23;CL:0000337!6.41e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.41e-08,23;CL:0000337,6.41e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.94e-21,54;UBERON:0001049,1.18e-19,52;UBERON:0005068,1.18e-19,52;UBERON:0006241,1.18e-19,52;UBERON:0007135,1.18e-19,52;UBERON:0000955,1.49e-17,47;UBERON:0006238,1.49e-17,47;UBERON:0001017,3.74e-17,73;UBERON:0002616,5.09e-17,46;UBERON:0002346,9.86e-17,64;UBERON:0003075,9.86e-17,64;UBERON:0007284,9.86e-17,64;UBERON:0010371,6.24e-16,73;UBERON:0001016,1.42e-15,75;UBERON:0004121,6.05e-15,95;UBERON:0000924,6.05e-15,95;UBERON:0006601,6.05e-15,95;UBERON:0003080,1.53e-14,40;UBERON:0004111,1.90e-14,122;UBERON:0002780,6.38e-14,39;UBERON:0001890,6.38e-14,39;UBERON:0006240,6.38e-14,39;UBERON:0003056,7.14e-14,49;UBERON:0000025,1.57e-13,114;UBERON:0002020,7.28e-13,34;UBERON:0003528,5.82e-11,29;UBERON:0002791,5.82e-11,29;UBERON:0001893,5.82e-11,29;UBERON:0010314,1.94e-09,92;UBERON:0000956,1.49e-07,21;UBERON:0001869,1.49e-07,21;UBERON:0000203,1.49e-07,21;UBERON:0002619,9.73e-07,17
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648857,19.1169453254588,27.8087433699243,31.6625717431958,36.0087804847471,38.1858965451052,32.7194927480037,14.2576470620972,57.1632168039972,90.1908701894705,22.8760315447288,23.660564135365,30.9177389467036,21.3113708738256,22.4711646902735,23.0020187745678,31.7698699019238,38.2736607153845,54.8395954275034,62.5025113579568,21.1727450820879,31.8278588005558,27.321114605844,22.6062231981363,25.0637373934474,24.8351693476581,19.7120537212749,17.8704327881238,14.2362694426888,19.432735697025,18.4511918800418,24.2670123041984,14.8166236126107,16.5965201097828,19.0453522236778,20.422707710414,16.2382080463151,14.941730856403,58.5364469917537,35.096622909371,29.1211082584951,18.4356806007997,65.7059456286326,151.353493821374,147.764400918804,124.318326416349,122.531319011049,130.850761276193,148.812597785771,142.429747548911,153.109209096235,143.193001239009,162.576737890071,29.4756067139062,49.4790843017279,40.6345981694839,31.1176597847416,40.4553403872006,33.8272055548026,31.781282075631,30.9052585858341,40.1149011989769,34.6195180116403,31.1779538864995,31.3119726700887,29.9652823903624,33.9333307745807,35.495119814569,35.2457331549475,30.0140404197176,33.7591135811484,30.0822707586414,28.8509883463419,30.8582327146874,35.3176854257082,31.235140883099,27.9065119934071,25.4095327121393,29.6151127620868,35.1221707915723,33.6729230640439,29.1978844768603,28.6182558545447,32.3873599478995,30.7333985011758,26.1907867628601,29.2830629841476,31.2508709789449,43.9666617170785,35.0897412668113,41.2552423772733,23.7197531765366,28.8974759046565,28.9834794525527
|phase1_expression=72.8677254326813,4.88565570695105,5.0049916332849,10.5862473957391,3.00537437967808,13.9339795686869,8.64366770203445,8.78038599402719,1.12630977721333,1.63845168425395,1.02730780935303,1.19658238493005,4.45121897821135,8.56719943706175,11.3257319017325,16.1980213911861,6.99561878128147,63.723357402364,59.3705497512849,55.595044385542,81.641558545027,85.7873818375649,69.4791439109568,39.9981056983517,36.7054849707472,5.16808767703518,4.73838195774982,7.32602191132023,10.4512880701006,8.56902441183765,10.199603490144,6.98533740805594,7.99584223859941,0,5.48818077527422,9.47537478543406,7.75843553797003,269.115838563832,180.488464584998,168.574645559563,210.586872715103,220.623691641578,232.559459101923,18.5068322424099,19.5657477253663,14.8672869250962,93.8869613217647,39.0265029920999,56.2396627800248,49.5796242639423,26.4574336871935,46.0008205967909,39.9322602417413,7.25362142011344,5.71359458542189,13.1202312378333,15.7593391966316,20.1112115988203,69.394546074842,91.5154394140617,67.186128771655,30.834852418291,27.5681386794453,42.2952867122258,55.3765163037506,44.0497671266582,77.2968285137484,121.02876617629,43.4459475572521,44.956977464453,43.3269420383847,108.833025057849,100.716054673936,39.5645281464302,40.542634240714,25.7381260250806,145.352962919193,164.333604115637,160.826040319287,76.230274308052,70.2625102866506,73.9696986190599,188.169341326931,167.140495179409,157.993388201222,72.1840034410486,73.1790439307389,75.4917755592467,9.31432177998164,15.2654551415707,20.0006497204158,33.5565312022741,22.4390540123558,38.8586297979228,73.4247351715866,56.0033608871669,50.4195468272989,17.3838929029619,9.35229616570328,19.7870161725791,62.9570086401762,10.2661181931454,10.1922095882658,14.2213340630666,6.71122227134764,4.81383744402687,7.58286667522175,42.0196677366141,218.543573798213,39.0402825740489,33.3091827390981,28.3152894830291,29.5187836487755,23.8141772073144,24.8112172056337,26.2643175879022,56.6076476111716,54.080159488047,60.1535175325915,18.1178871941098,25.3967746229453,19.8798853785441,22.3670113461747,110.671141270365,107.865054008929,21.4583926375217,22.7648736561249,30.5950392806638,25.1599049604668,179.299395367573,166.072718823161,49.2565060282428,186.861144206697,182.069405619195,165.814859558529,150.397650863811,24.135929232525,44.2888815371931,123.328706115633,82.7036493633843,31.7493880828997,26.2088399054159,34.2118046630164,28.1818009352787,33.4739575824533,39.7152532883034,39.0736191414069,104.257458407823,34.9220148551204,33.471776189704,26.7445708729202,27.1802708210193,22.2437799380478,20.5468778248078,18.108828003899,25.4763861527671,27.3863143052162,28.050921875504,27.8480229407681,28.5833566098993,29.5502835576181,20.5270750065557,30.0665814193217,30.3016916891002,27.9223474326155,26.0438018120457,22.2666923161684,25.2213139513086,27.6460547854647,22.9834449710733,35.1027945333555,29.6785974473425,24.8091630278887,31.6727148274477,313.542313309114,41.6763680136102,14.8688452342709,16.1314845664762,27.3008960685099,29.7262939981361,26.288962109707,25.0087570532945,27.5748774367639,27.9631670385462,20.8792787079585,17.1286912912971,21.8661631656234,22.0841683965677,24.7604390641283,31.4586793028978,20.9653908378453,26.4857893428308,52.1586727620975,35.1885418837965,55.2267904798094,43.1740815032066,50.6215991507503,46.1493694878296,81.4486598160434,97.570307814517,119.005035703762,110.31706454609,26.9771890649305,25.0267658574141,35.1840601252633,40.9249044540434,57.8151345957233,68.253136209934,71.2952384987975,76.2394764244648,76.5278270378167,121.63070604232,60.3826467414889,109.037297666871,97.979829357972,97.242868009638,69.6061964465019,49.6916827004268,43.0474933088189,24.4443921183925,31.452240453311,23.0853316654256,27.2240688014662,35.6788328351068,41.1815498732804,32.3921855443946,30.1083125242825,31.0050565508285,40.5015112390017,35.3944759785994,40.5809707384855,38.9105967584266,15.0791283939272,15.7732648307426,240.964493779328,208.884116952682,159.908387627841,136.082768133548,23.1148272981112,16.915552122693,16.7219356290616,18.7410597262386,23.0503035574095,14.3381278771531,18.7150886229211,15.286132662597,21.0501564870945,23.9649803487276,22.5314033429518,123.387385505974,42.4400854772723,32.5860054711077,19.7093220817827,67.3078101727945,43.8058956521877,42.2438306909668,37.1857975066644,46.5854546997068,69.9865486127431,49.4970588189723,35.1462478708781,37.0804404067056,29.2327850275471,46.1413666586291,40.0590712584995,26.8152412445286,110.983311475735,30.4303248912914,57.5646142833258,53.7985957929297,71.290773924194,67.4234130535827,68.6169415910844,96.8198538184426,34.4967410853654,52.5343535742274,74.5385985425771,27.8657767471101,19.8601244835964,23.5823536469089,22.0838836405802,22.1590214655833,19.8206968908299,135.731321071693,40.4963987490911,34.6729938178214,31.2978751254813,22.9809517545723,31.1662839203937,33.6303914613588,9.17883521966819,9.51669875800874,9.25939824489639,42.005507192665,35.4296312810872,28.6680448648857,19.1169453254588,27.8087433699243,31.6625717431958,36.0087804847471,38.1858965451052,32.7194927480037,14.2576470620972,57.1632168039972,90.1908701894705,22.8760315447288,23.660564135365,30.9177389467036,21.3113708738256,22.4711646902735,23.0020187745678,31.7698699019238,38.2736607153845,54.8395954275034,62.5025113579568,21.1727450820879,31.8278588005558,27.321114605844,22.6062231981363,25.0637373934474,24.8351693476581,19.7120537212749,17.8704327881238,14.2362694426888,19.432735697025,18.4511918800418,24.2670123041984,14.8166236126107,16.5965201097828,19.0453522236778,20.422707710414,16.2382080463151,14.941730856403,58.5364469917537,35.096622909371,29.1211082584951,18.4356806007997,65.7059456286326,151.353493821374,147.764400918804,124.318326416349,122.531319011049,130.850761276193,148.812597785771,142.429747548911,153.109209096235,143.193001239009,162.576737890071,29.4756067139062,49.4790843017279,40.6345981694839,31.1176597847416,40.4553403872006,33.8272055548026,31.781282075631,30.9052585858341,40.1149011989769,34.6195180116403,31.1779538864995,31.3119726700887,29.9652823903624,33.9333307745807,35.495119814569,35.2457331549475,30.0140404197176,33.7591135811484,30.0822707586414,28.8509883463419,30.8582327146874,35.3176854257082,31.235140883099,27.9065119934071,25.4095327121393,29.6151127620868,35.1221707915723,33.6729230640439,29.1978844768603,28.6182558545447,32.3873599478995,30.7333985011758,26.1907867628601,29.2830629841476,31.2508709789449,43.9666617170785,35.0897412668113,41.2552423772733,23.7197531765366,28.8974759046565,28.9834794525527
|short_description=p1@Rogdi
}}
}}

Latest revision as of 15:28, 25 September 2015

Short description:p1@Rogdi
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rogdi_5end
Coexpression cluster:MCL_coexpression_mm9:663
Association with transcript: 0bp_to_ENSMUST00000023191, ENSMUST00000090453, NM_133185, uc007ybk.1_5end
EntrezGene:Rogdi
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rogdi

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G772.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A263.72
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A459.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A655.60
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A381.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H285.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I969.48
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D140.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.71
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B910.45
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8269.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1180.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3168.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9210.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2220.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4232.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B793.89
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B856.24
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C446.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A239.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.11
Mouse Granule cells, donor1.CNhs12131.11713-123C369.39
Mouse Granule cells, donor2.CNhs12357.11731-123E391.52
Mouse Granule cells, donor3.CNhs12108.11636-122C767.19
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C742.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E755.38
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D244.05
Mouse Microglia, donor1.CNhs12629.11718-123C877.30
Mouse Microglia, donor2.CNhs12634.11736-123E8121.03
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F544.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D943.33
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1108.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5100.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.54
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3145.35
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3164.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7160.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D476.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F470.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D873.97
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4188.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5167.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6157.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D672.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F673.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E175.49
Mouse Schwann, donor1.CNhs12507.11728-123D99.31
Mouse Schwann, donor2.CNhs12573.11746-123F915.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F733.56
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C838.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F473.42
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A750.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G662.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B642.02
accessory axillary lymph node, adult.CNhs10475.1063-29H9218.54
adrenal gland, adult.CNhs10508.49-24D739.04
adrenal gland, embryo E14.CNhs11038.406-44C533.31
adrenal gland, embryo E16.CNhs11004.1254-43D628.32
adrenal gland, embryo E17.CNhs11043.1263-45I129.52
adrenal gland, embryo E18.CNhs11026.1262-18F523.81
adrenal gland, neonate N00.CNhs11191.1311-23C124.81
adrenal gland, neonate N25.CNhs11223.1377-27I326.26
amnion, adult pregnant day17.5.CNhs10488.583-22A856.61
aorta, adult.CNhs10498.46-23H154.08
bone (os femoris), adult.CNhs10483.56-12G260.15
bone (os femoris), neonate N02.CNhs11227.1985-43F518.12
bone (os femoris), neonate N16.CNhs11225.1525-43A625.40
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B2110.67
cerebellum, neonate N30.CNhs11135.1395-42I2107.87
colon, adult.CNhs10468.36-18H721.46
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D130.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D425.16
corpora quadrigemina, adult.CNhs10501.16-22A4179.30
corpus striatum, adult.CNhs10487.19-21D8166.07
corpus striatum, neonate N00.CNhs11226.630-43F149.26
cortex, adult.CNhs10473.12-14D5186.86
cortex, neonate N30.CNhs11107.1392-42F2182.07
diencephalon, adult.CNhs10482.20-12F2165.81
diencephalon, neonate N30.CNhs11201.1388-42B2150.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A244.29
epididymis, adult.CNhs10490.58-23B2123.33
eyeball, adult.CNhs10484.31-12G482.70
eyeball, embryo E12.CNhs11016.345-16C631.75
eyeball, embryo E14.CNhs10521.399-16E226.21
eyeball, embryo E15.CNhs10593.426-16C934.21
eyeball, embryo E17.CNhs11023.1261-18D428.18
eyeball, neonate N00.CNhs11207.633-15C633.47
eyeball, neonate N01.CNhs11140.1532-43E739.72
eyeball, neonate N02.CNhs11205.1551-44G839.07
eyeball, neonate N16.CNhs11188.777-19A2104.26
forelimb, embryo E11.CNhs10596.335-25E234.92
forelimb, embryo E12.CNhs10600.359-14H233.47
forelimb, embryo E13.CNhs10589.384-1E226.74
forelimb, embryo E14.CNhs10577.413-26A827.18
forelimb, embryo E15.CNhs11007.437-20E722.24
forelimb, embryo E17.CNhs10598.1517-43C420.55
forelimb, embryo E18.CNhs11008.1520-43B518.11
gonad, embryo E13.CNhs11044.1564-45I625.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C827.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.05
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.85
heart, embryo E11.CNhs10586.331-24E928.58
heart, embryo E12.CNhs11015.353-12F529.55
heart, embryo E13.CNhs11013.376-3I920.53
heart, embryo E14.CNhs10597.403-26D430.07
heart, embryo E15.CNhs11017.431-16C830.30
heart, embryo E16.CNhs11021.457-17C627.92
heart, embryo E17.CNhs11025.479-18E526.04
heart, embryo E18.CNhs11030.1283-20G322.27
heart, neonate N00.CNhs11213.639-21E325.22
heart, neonate N03.CNhs11221.1349-25I227.65
heart, neonate N10.CNhs11118.749-24G122.98
heart, neonate N16.CNhs11209.782-15G135.10
heart, neonate N20.CNhs11127.821-26I629.68
heart, neonate N25.CNhs11196.1351-25D324.81
heart, neonate N30.CNhs11202.1390-42D231.67
hippocampus, adult.CNhs10478.13-16E8313.54
hippocampus, neonate N00.CNhs11228.627-43G141.68
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I527.30
intestine, embryo E13.CNhs11010.381-16D529.73
intestine, embryo E15.CNhs10602.976-16D826.29
intestine, embryo E16.CNhs10585.463-22H425.01
intestine, embryo E17.CNhs10582.482-18D327.57
intestine, embryo E18.CNhs10526.1289-20F727.96
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E917.13
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F222.08
intestine, neonate N10.CNhs11098.755-23A524.76
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E320.97
intestine, neonate N30.CNhs11131.1384-42G126.49
kidney, embryo E14.CNhs10606.411-4I952.16
kidney, embryo E15.CNhs10997.434-16F835.19
kidney, embryo E16.CNhs10584.464-22A555.23
kidney, embryo E17.CNhs11028.483-18I243.17
kidney, embryo E18.CNhs11001.1288-20C750.62
kidney, neonate N00.CNhs11214.646-21G746.15
kidney, neonate N10.CNhs11206.758-6D581.45
kidney, neonate N20.CNhs11113.832-19I197.57
kidney, neonate N25.CNhs11122.1353-25F3119.01
kidney, neonate N30.CNhs11203.1385-42H1110.32
liver, adult pregnant day01.CNhs10466.508-5B226.98
liver, embryo E12.CNhs10601.355-15F825.03
liver, embryo E13.CNhs10524.378-3H635.18
liver, embryo E14.CNhs10594.409-16E140.92
liver, embryo E15.CNhs10520.433-16D757.82
liver, embryo E16.CNhs10523.462-17F568.25
liver, embryo E17.CNhs10510.481-18A371.30
liver, embryo E18.CNhs10579.499-43G476.24
liver, neonate N00.CNhs11117.641-24F476.53
liver, neonate N03.CNhs11123.1345-25G2121.63
liver, neonate N06.CNhs11101.684-20A860.38
liver, neonate N07.CNhs11103.716-20H2109.04
liver, neonate N10.CNhs11115.751-24B997.98
liver, neonate N20.CNhs11220.823-25A397.24
liver, neonate N25.CNhs11198.1368-26H169.61
liver, neonate N30.CNhs11106.1382-42D149.69
lung, adult.CNhs10474.28-22B143.05
lung, embryo E12.CNhs10522.354-16G224.44
lung, embryo E14.CNhs10604.404-26F831.45
lung, embryo E15.CNhs11020.432-17C523.09
lung, embryo E16.CNhs10998.458-17B627.22
lung, embryo E17.CNhs10605.480-44A635.68
lung, embryo E18.CNhs10583.1287-20I641.18
lung, neonate N00.CNhs11224.640-42C632.39
lung, neonate N06.CNhs11212.683-20E530.11
lung, neonate N07.CNhs11111.715-19A331.01
lung, neonate N10.CNhs11219.750-23E640.50
lung, neonate N20.CNhs11109.822-18A435.39
lung, neonate N25.CNhs11119.1359-25C740.58
lung, neonate N30.CNhs11133.1394-42H238.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B6240.96
mammary gland, adult pregnant day19.CNhs10476.588-5H2208.88
medulla oblongata, adult.CNhs10477.17-12C2159.91
medulla oblongata, neonate N30.CNhs11200.1396-42A3136.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.92
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.34
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.96
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.53
olfactory brain, adult.CNhs10489.18-22I9123.39
ovary, adult.CNhs10507.91-2I742.44
ovary, embryo E18.CNhs11040.505-44H732.59
ovary, neonate N00.CNhs11217.1299-22I419.71
oviduct, adult pregnant day01.CNhs10500.988-6G667.31
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F442.24
pancreas, embryo E15.CNhs11042.1556-45F237.19
pancreas, embryo E16.CNhs11003.460-26E546.59
pancreas, embryo E17.CNhs10599.1558-45G369.99
pancreas, embryo E18.CNhs10580.1535-43I749.50
pancreas, neonate N00.CNhs11105.645-26G935.15
pancreas, neonate N01.CNhs11138.1531-43D737.08
pancreas, neonate N02.CNhs11139.1539-43D829.23
pancreas, neonate N16.CNhs11136.787-43B646.14
pancreas, neonate N25.CNhs11094.1555-45E240.06
pancreas, neonate N30.CNhs11182.1548-44H526.82
pituitary gland, adult.CNhs10493.21-1G8110.98
pituitary gland, embryo E12.CNhs11018.346-16E630.43
pituitary gland, embryo E13.CNhs11009.370-44C757.56
pituitary gland, embryo E14.CNhs11037.398-44A553.80
pituitary gland, embryo E15.CNhs10592.427-16B971.29
pituitary gland, embryo E16.CNhs11036.449-43F667.42
pituitary gland, embryo E17.CNhs11039.1265-44F568.62
pituitary gland, neonate N00.CNhs11190.1308-22E996.82
placenta, adult pregnant day10.CNhs10472.539-13I734.50
placenta, adult pregnant day17.CNhs10464.577-18G352.53
prostate, adult.CNhs10470.859-1F874.54
skin, adult.CNhs10492.30-1C327.87
skin, neonate N00.CNhs11124.650-25G419.86
skin, neonate N03.CNhs11215.662-22H323.58
skin, neonate N06.CNhs11097.693-20I522.08
skin, neonate N10.CNhs11108.762-6C422.16
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C9135.73
spleen, adult.CNhs10465.25-2G240.50
spleen, embryo E16.CNhs11035.461-43C134.67
spleen, embryo E18.CNhs11011.1271-21F231.30
spleen, neonate N10.CNhs11116.752-24D122.98
spleen, neonate N20.CNhs11112.824-19H131.17
spleen, neonate N25.CNhs11099.1354-25G333.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.26
stomach, adult.CNhs10503.33-1H642.01
stomach, embryo E12.CNhs10588.356-43E335.43
stomach, embryo E15.CNhs10603.1252-16G828.67
stomach, embryo E16.CNhs11022.459-17D419.12
stomach, embryo E17.CNhs11006.1035-18D527.81
stomach, embryo E18.CNhs10999.1286-20C631.66
stomach, neonate N03.CNhs11193.1340-24B836.01
stomach, neonate N07.CNhs11210.718-18A938.19
stomach, neonate N25.CNhs11104.1355-25E432.72
stomach, neonate N30.CNhs11134.1386-42I114.26
submandibular gland, adult.CNhs10469.59-29C157.16
testis, adult.CNhs10504.57-7G590.19
testis, embryo E13.CNhs11031.389-23F522.88
testis, embryo E15.CNhs11034.443-27C523.66
testis, embryo E16.CNhs11033.470-26G530.92
testis, embryo E17.CNhs11029.486-18I521.31
testis, embryo E18.CNhs11027.503-18G522.47
testis, neonate N00.CNhs11189.1300-22B723.00
testis, neonate N07.CNhs11222.726-26I431.77
testis, neonate N10.CNhs11204.763-44D938.27
testis, neonate N20.CNhs11110.839-18H354.84
testis, neonate N30.CNhs11130.1391-42E262.50
thymus, adult.CNhs10471.38-12B521.17
thymus, embryo E14.CNhs11041.402-44I431.83
thymus, embryo E15.CNhs11005.430-45I227.32
thymus, embryo E16.CNhs11002.456-26C522.61
thymus, embryo E17.CNhs10581.478-18C125.06
thymus, embryo E18.CNhs10595.1273-19G424.84
thymus, neonate N02.CNhs11181.1541-43F819.71
thymus, neonate N03.CNhs11137.2104-43C717.87
thymus, neonate N06.CNhs11197.681-26C414.24
thymus, neonate N07.CNhs11211.713-19D319.43
thymus, neonate N10.CNhs11194.748-24E418.45
thymus, neonate N20.CNhs11186.820-7A224.27
thymus, neonate N25.CNhs11125.1362-25G714.82
thymus, neonate N30.CNhs11132.1393-42G216.60
tongue, adult.CNhs10499.32-1B419.05
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.94
urinary bladder, adult.CNhs10481.879-12E458.54
uterus, adult pregnant day19.CNhs10497.590-15F535.10
uterus, adult.CNhs10509.92-27E529.12
vagina, adult.CNhs10502.89-27D518.44
vesicular gland, adult.CNhs10491.51-27F865.71
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1151.35
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2147.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3124.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7122.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4130.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5148.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6142.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7153.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8143.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9162.58
whole body, embryo E11.CNhs11014.324-5I829.48
whole body, embryo E12.CNhs10587.857-27C949.48
whole body, embryo E13.CNhs10512.372-23H240.63
whole body, embryo E14.5.CNhs10578.420-27D231.12
whole body, embryo E14.CNhs10519.395-14B140.46
whole body, embryo E16.CNhs10514.453-14F233.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G540.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G534.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.76
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G535.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G535.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.62
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.28
whole body, embryo E17.5.CNhs10513.490-9F931.25
whole body, embryo E17.CNhs10517.475-3I543.97
whole body, embryo E18.CNhs10516.493-3B335.09
whole body, neonate N00.CNhs10525.657-19C241.26
whole body, neonate N01.CNhs10576.659-23C623.72
whole body, neonate N06.CNhs10515.692-21D128.90
whole body, neonate N10.CNhs10518.761-6B428.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.41e-0823
neuroblast (sensu Vertebrata)6.41e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.94e-2154
neural tube1.18e-1952
neural rod1.18e-1952
future spinal cord1.18e-1952
neural keel1.18e-1952
brain1.49e-1747
future brain1.49e-1747
central nervous system3.74e-1773
regional part of brain5.09e-1746
neurectoderm9.86e-1764
neural plate9.86e-1764
presumptive neural plate9.86e-1764
ecto-epithelium6.24e-1673
nervous system1.42e-1575
ectoderm-derived structure6.05e-1595
ectoderm6.05e-1595
presumptive ectoderm6.05e-1595
anterior neural tube1.53e-1440
anatomical conduit1.90e-14122
regional part of forebrain6.38e-1439
forebrain6.38e-1439
future forebrain6.38e-1439
pre-chordal neural plate7.14e-1449
tube1.57e-13114
gray matter7.28e-1334
brain grey matter5.82e-1129
regional part of telencephalon5.82e-1129
telencephalon5.82e-1129
structure with developmental contribution from neural crest1.94e-0992
cerebral cortex1.49e-0721
cerebral hemisphere1.49e-0721
pallium1.49e-0721
regional part of cerebral cortex9.73e-0717
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