FFCP PHASE1:Mm9::chr16:72027752..72027771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1237 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:72027752..72027771,+ | |||
|description=CAGE_peak_at_chr16:72027752..72027771,+ | |||
|id=chr16:72027752..72027771,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.34e-14!23;CL:0000337!1.34e-14!23;CL:0000540!3.82e-10!33;CL:0000047!3.82e-10!33;CL:0000031!3.82e-10!33;CL:0000404!3.82e-10!33;CL:0000393!1.74e-07!39;CL:0000211!1.74e-07!39;CL:0000221!3.96e-07!44;CL:0000133!3.96e-07!44;CL:0002319!8.50e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.25e-15,23;CL:0000337,3.25e-15,23;CL:0000540,6.45e-12,33;CL:0000047,6.45e-12,33;CL:0000031,6.45e-12,33;CL:0000404,6.45e-12,33;CL:0002608,5.32e-11,3;CL:0000120,9.64e-11,3;CL:0002613,3.83e-10,3;CL:0000393,1.03e-09,39;CL:0000211,1.03e-09,39;CL:0002319,1.37e-08,43;CL:0000221,2.42e-08,44;CL:0000133,2.42e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.56e-10!73;UBERON:0005743!5.56e-10!73;UBERON:0000033!2.02e-09!63;UBERON:0000073!2.12e-09!75;UBERON:0001016!2.12e-09!75;UBERON:0001049!3.43e-09!52;UBERON:0005068!3.43e-09!52;UBERON:0006241!3.43e-09!52;UBERON:0007135!3.43e-09!52;UBERON:0004121!4.70e-09!102;UBERON:0000924!4.70e-09!102;UBERON:0006601!4.70e-09!102;UBERON:0002346!1.01e-08!71;UBERON:0003075!1.01e-08!71;UBERON:0007284!1.01e-08!71;UBERON:0002020!2.97e-08!34;UBERON:0003056!9.69e-08!49;UBERON:0000955!4.56e-07!50;UBERON:0006238!4.56e-07!50;UBERON:0002616!9.91e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.04e-10,5;UBERON:0002435,1.04e-10,5;UBERON:0000204,1.04e-10,5;UBERON:0010082,1.04e-10,5;UBERON:0003056,6.29e-10,49;UBERON:0002420,8.30e-10,8;UBERON:0007245,8.30e-10,8;UBERON:0010009,8.30e-10,8;UBERON:0010011,8.30e-10,8;UBERON:0000454,8.30e-10,8;UBERON:0004121,2.49e-08,95;UBERON:0000924,2.49e-08,95;UBERON:0006601,2.49e-08,95;UBERON:0002346,3.69e-08,64;UBERON:0003075,3.69e-08,64;UBERON:0007284,3.69e-08,64;UBERON:0001017,5.17e-08,73;UBERON:0010371,6.82e-08,73;UBERON:0002780,7.46e-08,39;UBERON:0001890,7.46e-08,39;UBERON:0006240,7.46e-08,39;UBERON:0001954,8.18e-08,7;UBERON:0003022,8.18e-08,7;UBERON:0002421,8.18e-08,7;UBERON:0000349,8.18e-08,7;UBERON:0002600,8.18e-08,7;UBERON:0002020,8.84e-08,34;UBERON:0001016,1.03e-07,75;UBERON:0003080,1.32e-07,40;UBERON:0003528,1.35e-07,29;UBERON:0002791,1.35e-07,29;UBERON:0001893,1.35e-07,29 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,3.80298842103708,2.71075625655306,0,0,0,0,0,0,0.725827286159344,0.540023753326763,0.210324961351382,0.571301968807607,0.883474163806454,3.91970557487853,4.2172007248024,2.75765635983006,0,0.510749352340751,0.614426133024974,2.90149833006426,3.47653045689157,1.04182674111352,0,1.12552522006336,0,0.589257170947335,0.711858403995515,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.915001205637253,6.78533501409468,0.347648640384553,0.255715457330331,1.0389402227978,0.811206315338788,0,0,0,0,3.6433724029557,1.14951052216736,2.16074555766419,0.90422890701429,0.136072998302656,0,0.187403449119458,0,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0.414251545071004,1.17263029990548,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.23485534855141,0,0,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,1.19513524027894,0,0.419226325255965,0.367687016900028,0.222246727801615,1.44224540067226,0.64183841918363,0.505394423527595,1.01391719956096,1.32038438970253,0.655490552289177,0.960377286073039,0.918967503289812,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0,0.887379030796687,0.476872379894642,0.581385666529314,0.846984423737976,0.761531471025089,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.886540341380071,1.22769312950907,0.464810523557898,0,1.24905288968973,0.701794825336225,0.214871054048298,0,0,0 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,3.80298842103708,2.71075625655306,0,0,0,0,0,0,0.725827286159344,0.540023753326763,0.210324961351382,0.571301968807607,0.883474163806454,3.91970557487853,4.2172007248024,2.75765635983006,0,0.510749352340751,0.614426133024974,2.90149833006426,3.47653045689157,1.04182674111352,0,1.12552522006336,0,0.589257170947335,0.711858403995515,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.915001205637253,6.78533501409468,0.347648640384553,0.255715457330331,1.0389402227978,0.811206315338788,0,0,0,0,3.6433724029557,1.14951052216736,2.16074555766419,0.90422890701429,0.136072998302656,0,0.187403449119458,0,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0.414251545071004,1.17263029990548,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.23485534855141,0,0,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.26042765821917,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,1.19513524027894,0,0.419226325255965,0.367687016900028,0.222246727801615,1.44224540067226,0.64183841918363,0.505394423527595,1.01391719956096,1.32038438970253,0.655490552289177,0.960377286073039,0.918967503289812,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0,0.887379030796687,0.476872379894642,0.581385666529314,0.846984423737976,0.761531471025089,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.886540341380071,1.22769312950907,0.464810523557898,0,1.24905288968973,0.701794825336225,0.214871054048298,0,0,0 | ||
|short_description=p@chr16:72027752..72027771,+ | |||
}} | }} |
Latest revision as of 01:16, 4 August 2015
Short description: | p@chr16:72027752..72027771, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:72027752..72027771, + |
Coexpression cluster: | MCL_coexpression_mm9:1237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.25e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.25e-15 | 23 |
neuron | 6.45e-12 | 33 |
neuronal stem cell | 6.45e-12 | 33 |
neuroblast | 6.45e-12 | 33 |
electrically signaling cell | 6.45e-12 | 33 |
hippocampal neuron | 5.32e-11 | 3 |
granule cell | 9.64e-11 | 3 |
striatum neuron | 3.83e-10 | 3 |
electrically responsive cell | 1.03e-09 | 39 |
electrically active cell | 1.03e-09 | 39 |
neural cell | 1.37e-08 | 43 |
ectodermal cell | 2.42e-08 | 44 |
neurectodermal cell | 2.42e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.04e-10 | 5 |
striatum | 1.04e-10 | 5 |
ventral part of telencephalon | 1.04e-10 | 5 |
future corpus striatum | 1.04e-10 | 5 |
pre-chordal neural plate | 6.29e-10 | 49 |
basal ganglion | 8.30e-10 | 8 |
nuclear complex of neuraxis | 8.30e-10 | 8 |
aggregate regional part of brain | 8.30e-10 | 8 |
collection of basal ganglia | 8.30e-10 | 8 |
cerebral subcortex | 8.30e-10 | 8 |
ectoderm-derived structure | 2.49e-08 | 95 |
ectoderm | 2.49e-08 | 95 |
presumptive ectoderm | 2.49e-08 | 95 |
neurectoderm | 3.69e-08 | 64 |
neural plate | 3.69e-08 | 64 |
presumptive neural plate | 3.69e-08 | 64 |
central nervous system | 5.17e-08 | 73 |
ecto-epithelium | 6.82e-08 | 73 |
regional part of forebrain | 7.46e-08 | 39 |
forebrain | 7.46e-08 | 39 |
future forebrain | 7.46e-08 | 39 |
Ammon's horn | 8.18e-08 | 7 |
lobe parts of cerebral cortex | 8.18e-08 | 7 |
hippocampal formation | 8.18e-08 | 7 |
limbic system | 8.18e-08 | 7 |
limbic lobe | 8.18e-08 | 7 |
gray matter | 8.84e-08 | 34 |
nervous system | 1.03e-07 | 75 |
anterior neural tube | 1.32e-07 | 40 |
brain grey matter | 1.35e-07 | 29 |
regional part of telencephalon | 1.35e-07 | 29 |
telencephalon | 1.35e-07 | 29 |