FFCP PHASE1:Mm9::chr18:78402606..78402617,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:78402606..78402617,- to FFCP PHASE1:Mm9::chr18:78402606..78402617,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27411 | |EntrezGene=27411 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1169 | |||
|TSSclassifier=NA | |||
|UniProt=Q80VG5 | |UniProt=Q80VG5 | ||
|association_with_transcript=12bp_to_uc012bfg.1_5end | |||
|cluster_id=chr18:78402606..78402617,- | |||
|description=CAGE_peak_7_at_Slc14a2_5end | |||
|id=chr18:78402606..78402617,- | |||
|ontology_enrichment_celltype=CL:0000117!4.64e-18!23;CL:0000337!4.64e-18!23;CL:0000540!2.53e-11!33;CL:0000047!2.53e-11!33;CL:0000031!2.53e-11!33;CL:0000404!2.53e-11!33;CL:0002319!3.28e-10!43;CL:0000221!7.09e-10!44;CL:0000133!7.09e-10!44;CL:0000393!5.74e-09!39;CL:0000211!5.74e-09!39;CL:0000055!3.70e-08!50;CL:0002609!1.14e-07!6;CL:0002613!1.77e-07!3;CL:0000120!2.68e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.73e-38,3;CL:0000117,1.04e-19,23;CL:0000337,1.04e-19,23;CL:0000120,1.59e-17,3;CL:0000540,7.92e-14,33;CL:0000047,7.92e-14,33;CL:0000031,7.92e-14,33;CL:0000404,7.92e-14,33;CL:0000393,9.76e-12,39;CL:0000211,9.76e-12,39;CL:0002319,1.15e-10,43;CL:0000221,2.00e-10,44;CL:0000133,2.00e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.74e-08!73;UBERON:0005743!2.74e-08!73;UBERON:0002020!4.75e-08!34;UBERON:0000073!6.44e-08!75;UBERON:0001016!6.44e-08!75;UBERON:0001049!1.19e-07!52;UBERON:0005068!1.19e-07!52;UBERON:0006241!1.19e-07!52;UBERON:0007135!1.19e-07!52;UBERON:0000369!2.22e-07!5;UBERON:0002435!2.22e-07!5;UBERON:0000204!2.22e-07!5;UBERON:0010082!2.22e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.91e-23,5;UBERON:0002435,2.91e-23,5;UBERON:0000204,2.91e-23,5;UBERON:0010082,2.91e-23,5;UBERON:0002420,7.60e-15,8;UBERON:0007245,7.60e-15,8;UBERON:0010009,7.60e-15,8;UBERON:0010011,7.60e-15,8;UBERON:0000454,7.60e-15,8;UBERON:0003528,4.08e-11,29;UBERON:0002791,4.08e-11,29;UBERON:0001893,4.08e-11,29;UBERON:0002020,1.59e-09,34;UBERON:0001017,1.47e-08,73;UBERON:0002780,2.46e-08,39;UBERON:0001890,2.46e-08,39;UBERON:0006240,2.46e-08,39;UBERON:0001016,2.47e-08,75;UBERON:0003080,3.92e-08,40;UBERON:0002616,4.23e-07,46;UBERON:0000955,5.93e-07,47;UBERON:0006238,5.93e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,1.05162480675691,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,2.1101806036831,3.38504281328916,1.04182674111352,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0,0,0,0.376437521661322,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,1.05162480675691,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,2.1101806036831,3.38504281328916,1.04182674111352,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0,0,0,0.376437521661322,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p7@Slc14a2 | |||
}} | }} |
Latest revision as of 18:21, 1 October 2015
Short description: | p7@Slc14a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Slc14a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1169 |
Association with transcript: | 12bp_to_uc012bfg.1_5end |
EntrezGene: | Slc14a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.73e-38 | 3 |
CNS neuron (sensu Vertebrata) | 1.04e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-19 | 23 |
granule cell | 1.59e-17 | 3 |
neuron | 7.92e-14 | 33 |
neuronal stem cell | 7.92e-14 | 33 |
neuroblast | 7.92e-14 | 33 |
electrically signaling cell | 7.92e-14 | 33 |
electrically responsive cell | 9.76e-12 | 39 |
electrically active cell | 9.76e-12 | 39 |
neural cell | 1.15e-10 | 43 |
ectodermal cell | 2.00e-10 | 44 |
neurectodermal cell | 2.00e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.91e-23 | 5 |
striatum | 2.91e-23 | 5 |
ventral part of telencephalon | 2.91e-23 | 5 |
future corpus striatum | 2.91e-23 | 5 |
basal ganglion | 7.60e-15 | 8 |
nuclear complex of neuraxis | 7.60e-15 | 8 |
aggregate regional part of brain | 7.60e-15 | 8 |
collection of basal ganglia | 7.60e-15 | 8 |
cerebral subcortex | 7.60e-15 | 8 |
brain grey matter | 4.08e-11 | 29 |
regional part of telencephalon | 4.08e-11 | 29 |
telencephalon | 4.08e-11 | 29 |
gray matter | 1.59e-09 | 34 |
central nervous system | 1.47e-08 | 73 |
regional part of forebrain | 2.46e-08 | 39 |
forebrain | 2.46e-08 | 39 |
future forebrain | 2.46e-08 | 39 |
nervous system | 2.47e-08 | 75 |
anterior neural tube | 3.92e-08 | 40 |
regional part of brain | 4.23e-07 | 46 |
brain | 5.93e-07 | 47 |
future brain | 5.93e-07 | 47 |