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FFCP PHASE1:Mm9::chr19:45890497..45890566,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:45890497..45890566,-
|DHSsupport=NA
|short_description=p1@Kcnip2
|DPIdataset=NA
|description=CAGE_peak_1_at_Kcnip2_5end
|association_with_transcript=0bp_to_ENSMUST00000026247,ENSMUST00000079431,ENSMUST00000111906,ENSMUST00000162528_5end
|EntrezGene=80906
|EntrezGene=80906
|HGNC=
|HGNC=
|MCL_coexpression_id=235
|TSSclassifier=NA
|UniProt=E9QNK8,Q3YAB2,Q3YAB3
|UniProt=E9QNK8,Q3YAB2,Q3YAB3
|association_with_transcript=0bp_to_ENSMUST00000026247,ENSMUST00000079431,ENSMUST00000111906,ENSMUST00000162528_5end
|cluster_id=chr19:45890497..45890566,-
|description=CAGE_peak_1_at_Kcnip2_5end
|id=chr19:45890497..45890566,-
|ontology_enrichment_celltype=CL:0000117!9.39e-08!23;CL:0000337!9.39e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.72e-09,23;CL:0000337,7.72e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.88e-16!52;UBERON:0005068!2.88e-16!52;UBERON:0006241!2.88e-16!52;UBERON:0007135!2.88e-16!52;UBERON:0000955!1.42e-15!50;UBERON:0006238!1.42e-15!50;UBERON:0002616!6.53e-15!49;UBERON:0002020!1.55e-14!34;UBERON:0003080!1.91e-14!40;UBERON:0002780!6.92e-14!39;UBERON:0001890!6.92e-14!39;UBERON:0006240!6.92e-14!39;UBERON:0000033!3.11e-12!63;UBERON:0002791!4.15e-12!29;UBERON:0003528!4.15e-12!29;UBERON:0001893!4.15e-12!29;UBERON:0003056!7.96e-12!49;UBERON:0001017!2.41e-11!73;UBERON:0005743!2.41e-11!73;UBERON:0002346!2.02e-10!71;UBERON:0003075!2.02e-10!71;UBERON:0007284!2.02e-10!71;UBERON:0000073!2.58e-10!75;UBERON:0001016!2.58e-10!75;UBERON:0000956!5.51e-09!21;UBERON:0001869!5.51e-09!21;UBERON:0000203!5.51e-09!21;UBERON:0000025!1.01e-08!114;UBERON:0002619!2.24e-08!17;UBERON:0002021!9.69e-08!10;UBERON:0000411!9.69e-08!10;UBERON:0001950!9.69e-08!10;UBERON:0004111!1.23e-07!122;UBERON:0004121!3.37e-07!102;UBERON:0000924!3.37e-07!102;UBERON:0006601!3.37e-07!102;UBERON:0000468!7.78e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-18,54;UBERON:0001049,2.61e-17,52;UBERON:0005068,2.61e-17,52;UBERON:0006241,2.61e-17,52;UBERON:0007135,2.61e-17,52;UBERON:0002020,1.23e-15,34;UBERON:0003080,3.21e-15,40;UBERON:0000955,8.89e-15,47;UBERON:0006238,8.89e-15,47;UBERON:0002780,1.40e-14,39;UBERON:0001890,1.40e-14,39;UBERON:0006240,1.40e-14,39;UBERON:0002616,4.81e-14,46;UBERON:0003528,8.03e-13,29;UBERON:0002791,8.03e-13,29;UBERON:0001893,8.03e-13,29;UBERON:0001017,1.52e-12,73;UBERON:0010314,3.37e-12,92;UBERON:0002346,5.50e-12,64;UBERON:0003075,5.50e-12,64;UBERON:0007284,5.50e-12,64;UBERON:0001016,1.09e-11,75;UBERON:0003056,3.87e-11,49;UBERON:0010371,1.45e-09,73;UBERON:0000956,3.46e-09,21;UBERON:0001869,3.46e-09,21;UBERON:0000203,3.46e-09,21;UBERON:0002021,8.01e-09,10;UBERON:0000411,8.01e-09,10;UBERON:0001950,8.01e-09,10;UBERON:0002619,2.06e-08,17;UBERON:0004121,1.04e-07,95;UBERON:0000924,1.04e-07,95;UBERON:0006601,1.04e-07,95;UBERON:0000025,3.33e-07,114
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0.468129052643987,0,0,0,0.0874204024189974,0,0,0,0,0,0,20.2403030559546,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.777719596297134,0,0,0,0,0,0,0,0,1.21389876515759,5.28990979272033,2.53532561402472,0,0,0,0,0,0.599200221036809,0,1.65903379693564,2.43010688997043,1.47227472945967,15.7108041422092,20.7616428494517,1.83736198822431,2.39613677545591,3.67687514644008,12.1127469099328,26.0482169693783,17.2039317246993,3.69281605644543,3.47653045689157,2.08365348222704,3.62937898701795,14.069065250792,40.7971321564083,16.4992007865254,14.5219114415085,11.9295645328192,0,0,0,0,0,0,0,0,5.89866564553358,0,0,0,0.14084341977668,0,0,0,0,0,0,3.19714863213368,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0.289198713839823,0,0,0,0,0,0.878342391034642,1.8850203613211,5.62005521458901,0,0,0,33.5531032266803,299.6628948462,24.6282530141214,130.194415824015,132.460606897111,40.7264567336738,103.185443311094,0.916554274652847,0.746441823660558,0.758168275301024,1.26265113531884,0.260240885925407,0,0.360124259610698,0.452114453507145,0.272145996605311,0.12811372028485,0.374806898238915,6.20888089773638,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0,0,0.411564272815887,2.38841120182192,0,0,0,0.207125772535502,0,0.540186184383045,1.89395788468168,4.52557733019029,11.5700334665534,36.2752953810636,53.3864068785242,57.7988444717489,71.0898551626236,90.2921052435024,152.409361946209,185.089184080471,151.050479320243,144.674519423681,202.719510415819,20.5809224758569,0.330418782983798,7.93351699990633,1.70630600428187,1.39342003116263,0.902072229254653,2.21851877085677,2.66853652613844,3.42406127002606,17.0830462156024,5.76446341534038,7.28872105520782,8.75408476981064,11.307917052909,7.19055526923377,6.26800344636613,10.5544874824815,0.569003702859245,1.02823661348756,2.25415471346161,2.03651327845314,0.387904974335251,1.47285221769669,4.93244989569207,11.9564219863478,6.90794402502049,7.15703550746443,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0,0,0.810676133875177,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.568474235311454,1.14075483509418,2.20668611507745,1.64283173801951,1.67506257441816,1.19021820443007,0.780534591431195,0.788175720530955,0.664394068946325,1.91345722388985,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0.551873492609465,7.06422595946285,5.86058432961016,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,134.312310264315,1.27746076687442,1.78065603667255,1.30309567482861,3.46437258242324,21.2392221343941,0.485561272309963,3.32555912661226,15.0884063804718,20.9664343945349,11.0676653259814,5.42699415653264,15.2684166380552,12.1209108650805,35.7121536467472,17.9211634577498,19.5957532171555,10.5536277783674,0.18006109403131,0.129358683782755,1.28602221018955,2.30542303734956,3.92411398724555,8.22745103010605,19.4857567433344,0,0.847328283455281,0.882113592219848,2.4732937941222,2.42196640043858,0.784068024066026,0.596861720015682,0.820704498725306,10.4933101186746,8.52956389248344,0,2.88941615148511,1.11116716421827,0,0.136694227721025,0,0.169978429993855,0,0,5.72802370809068,1.10717597753397,0.609958401380546,1.72808545314882,0.836353184057875,1.9652630737156,1.34864346384821,2.31429676030941,2.87931536182433,3.6292192521702,0,0,0.897099276263873,1.82004339502807,0.777804753376191,0.258319646955462,0.675824501963113,0.704143431874524,0.2604087696879,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0.201652370273681,0,0.384847366561318,0,2.26730383615211,0,0,0,0,0.187682475451182,1.28206136987086,0.428736758158132,0,99.9610761432208,82.3982173347847,83.0698494487125,57.227109720448,76.0441596945413,112.553690711065,91.1280375312938,86.4616710190503,73.4090702554411,81.2883689450357,0.31136204275253,0.399024873401031,0.512200817262403,2.43106717068294,2.30574478890781,1.65459157605013,2.44471400581777,1.85431551515005,2.56735367673452,1.76888048234658,2.78827229879264,1.69763707247469,1.68554713445788,1.72867911493147,1.95280594449085,1.90517476513229,1.73826488917283,1.73618298417335,3.29668720642645,2.50238164228475,1.37147700954166,2.48466128623072,1.90748951957857,1.74415699958794,2.07040636913727,3.04612588410035,3.10977553883713,1.31534855718921,1.49384525230448,3.36685362994643,1.54225523561426,2.46261205938909,0.818462086339379,1.39443157067369,1.15743966588685,6.24526444844865,2.57324769289949,2.14871054048298,1.14772999241306,0.661774257358546,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0.468129052643987,0,0,0,0.0874204024189974,0,0,0,0,0,0,20.2403030559546,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.777719596297134,0,0,0,0,0,0,0,0,1.21389876515759,5.28990979272033,2.53532561402472,0,0,0,0,0,0.599200221036809,0,1.65903379693564,2.43010688997043,1.47227472945967,15.7108041422092,20.7616428494517,1.83736198822431,2.39613677545591,3.67687514644008,12.1127469099328,26.0482169693783,17.2039317246993,3.69281605644543,3.47653045689157,2.08365348222704,3.62937898701795,14.069065250792,40.7971321564083,16.4992007865254,14.5219114415085,11.9295645328192,0,0,0,0,0,0,0,0,5.89866564553358,0,0,0,0.14084341977668,0,0,0,0,0,0,3.19714863213368,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0.289198713839823,0,0,0,0,0,0.878342391034642,1.8850203613211,5.62005521458901,0,0,0,33.5531032266803,299.6628948462,24.6282530141214,130.194415824015,132.460606897111,40.7264567336738,103.185443311094,0.916554274652847,0.746441823660558,0.758168275301024,1.26265113531884,0.260240885925407,0,0.360124259610698,0.452114453507145,0.272145996605311,0.12811372028485,0.374806898238915,6.20888089773638,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0,0,0.411564272815887,2.38841120182192,0,0,0,0.207125772535502,0,0.540186184383045,1.89395788468168,4.52557733019029,11.5700334665534,36.2752953810636,53.3864068785242,57.7988444717489,71.0898551626236,90.2921052435024,152.409361946209,185.089184080471,151.050479320243,144.674519423681,202.719510415819,20.5809224758569,0.330418782983798,7.93351699990633,1.70630600428187,1.39342003116263,0.902072229254653,2.21851877085677,2.66853652613844,3.42406127002606,17.0830462156024,5.76446341534038,7.28872105520782,8.75408476981064,11.307917052909,7.19055526923377,6.26800344636613,10.5544874824815,0.569003702859245,1.02823661348756,2.25415471346161,2.03651327845314,0.387904974335251,1.47285221769669,4.93244989569207,11.9564219863478,6.90794402502049,7.15703550746443,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0,0,0.810676133875177,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.568474235311454,1.14075483509418,2.20668611507745,1.64283173801951,1.67506257441816,1.19021820443007,0.780534591431195,0.788175720530955,0.664394068946325,1.91345722388985,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0.551873492609465,7.06422595946285,5.86058432961016,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,134.312310264315,1.27746076687442,1.78065603667255,1.30309567482861,3.46437258242324,21.2392221343941,0.485561272309963,3.32555912661226,15.0884063804718,20.9664343945349,11.0676653259814,5.42699415653264,15.2684166380552,12.1209108650805,35.7121536467472,17.9211634577498,19.5957532171555,10.5536277783674,0.18006109403131,0.129358683782755,1.28602221018955,2.30542303734956,3.92411398724555,8.22745103010605,19.4857567433344,0,0.847328283455281,0.882113592219848,2.4732937941222,2.42196640043858,0.784068024066026,0.596861720015682,0.820704498725306,10.4933101186746,8.52956389248344,0,2.88941615148511,1.11116716421827,0,0.136694227721025,0,0.169978429993855,0,0,5.72802370809068,1.10717597753397,0.609958401380546,1.72808545314882,0.836353184057875,1.9652630737156,1.34864346384821,2.31429676030941,2.87931536182433,3.6292192521702,0,0,0.897099276263873,1.82004339502807,0.777804753376191,0.258319646955462,0.675824501963113,0.704143431874524,0.2604087696879,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0.201652370273681,0,0.384847366561318,0,2.26730383615211,0,0,0,0,0.187682475451182,1.28206136987086,0.428736758158132,0,99.9610761432208,82.3982173347847,83.0698494487125,57.227109720448,76.0441596945413,112.553690711065,91.1280375312938,86.4616710190503,73.4090702554411,81.2883689450357,0.31136204275253,0.399024873401031,0.512200817262403,2.43106717068294,2.30574478890781,1.65459157605013,2.44471400581777,1.85431551515005,2.56735367673452,1.76888048234658,2.78827229879264,1.69763707247469,1.68554713445788,1.72867911493147,1.95280594449085,1.90517476513229,1.73826488917283,1.73618298417335,3.29668720642645,2.50238164228475,1.37147700954166,2.48466128623072,1.90748951957857,1.74415699958794,2.07040636913727,3.04612588410035,3.10977553883713,1.31534855718921,1.49384525230448,3.36685362994643,1.54225523561426,2.46261205938909,0.818462086339379,1.39443157067369,1.15743966588685,6.24526444844865,2.57324769289949,2.14871054048298,1.14772999241306,0.661774257358546,0
|short_description=p1@Kcnip2
}}
}}

Latest revision as of 20:45, 25 September 2015

Short description:p1@Kcnip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnip2_5end
Coexpression cluster:MCL_coexpression_mm9:235
Association with transcript: 0bp_to_ENSMUST00000026247, ENSMUST00000079431, ENSMUST00000111906, ENSMUST00000162528_5end
EntrezGene:Kcnip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.20
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A433.55
corpus striatum, adult.CNhs10487.19-21D8299.66
corpus striatum, neonate N00.CNhs11226.630-43F124.63
cortex, adult.CNhs10473.12-14D5130.19
cortex, neonate N30.CNhs11107.1392-42F2132.46
diencephalon, adult.CNhs10482.20-12F240.73
diencephalon, neonate N30.CNhs11201.1388-42B2103.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C611.57
heart, embryo E17.CNhs11025.479-18E536.28
heart, embryo E18.CNhs11030.1283-20G353.39
heart, neonate N00.CNhs11213.639-21E357.80
heart, neonate N03.CNhs11221.1349-25I271.09
heart, neonate N10.CNhs11118.749-24G190.29
heart, neonate N16.CNhs11209.782-15G1152.41
heart, neonate N20.CNhs11127.821-26I6185.09
heart, neonate N25.CNhs11196.1351-25D3151.05
heart, neonate N30.CNhs11202.1390-42D2144.67
hippocampus, adult.CNhs10478.13-16E8202.72
hippocampus, neonate N00.CNhs11228.627-43G120.58
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A37.93
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G110.55
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I111.96
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H17.16
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9134.31
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E515.09
pancreas, embryo E17.CNhs10599.1558-45G320.97
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B635.71
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I13.63
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A199.96
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A282.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A383.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.04
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5112.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A691.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A786.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A873.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A981.29
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.72e-0923
neuroblast (sensu Vertebrata)7.72e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.31e-1854
neural tube2.61e-1752
neural rod2.61e-1752
future spinal cord2.61e-1752
neural keel2.61e-1752
gray matter1.23e-1534
anterior neural tube3.21e-1540
brain8.89e-1547
future brain8.89e-1547
regional part of forebrain1.40e-1439
forebrain1.40e-1439
future forebrain1.40e-1439
regional part of brain4.81e-1446
brain grey matter8.03e-1329
regional part of telencephalon8.03e-1329
telencephalon8.03e-1329
central nervous system1.52e-1273
structure with developmental contribution from neural crest3.37e-1292
neurectoderm5.50e-1264
neural plate5.50e-1264
presumptive neural plate5.50e-1264
nervous system1.09e-1175
pre-chordal neural plate3.87e-1149
ecto-epithelium1.45e-0973
cerebral cortex3.46e-0921
cerebral hemisphere3.46e-0921
pallium3.46e-0921
occipital lobe8.01e-0910
visual cortex8.01e-0910
neocortex8.01e-0910
regional part of cerebral cortex2.06e-0817
ectoderm-derived structure1.04e-0795
ectoderm1.04e-0795
presumptive ectoderm1.04e-0795
tube3.33e-07114
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