FFCP PHASE1:Mm9::chr19:47653901..47653915,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20874 | |EntrezGene=20874 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=115 | |||
|TSSclassifier=NA | |||
|UniProt=O54988 | |UniProt=O54988 | ||
|association_with_transcript=-252bp_to_ENSMUST00000026043_5end | |||
|cluster_id=chr19:47653901..47653915,+ | |||
|description=CAGE_peak_7_at_Slk_5end | |||
|id=chr19:47653901..47653915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.78e-10,19;CL:0000988,2.24e-10,32;CL:0002032,2.24e-10,32;CL:0000037,2.24e-10,32;CL:0000837,2.24e-10,32;CL:0002320,7.40e-09,46;CL:0000134,7.40e-09,46;CL:0000557,4.95e-08,7;CL:0000219,2.24e-07,54;CL:0000213,3.59e-07,1;CL:0002078,3.59e-07,1;CL:0000115,3.59e-07,1;CL:0002262,3.59e-07,1;CL:1000398,3.59e-07,1;CL:0000034,8.96e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.40e-09,46;UBERON:0002394,3.59e-07,1;UBERON:0001281,3.59e-07,1;UBERON:0000353,3.59e-07,1;UBERON:0003497,3.59e-07,1;UBERON:0003909,3.59e-07,1;UBERON:0003928,3.59e-07,1;UBERON:0003835,3.59e-07,1;UBERON:0003513,3.59e-07,1;UBERON:0001280,3.59e-07,1;UBERON:0004647,3.59e-07,1;UBERON:0002294,3.59e-07,1;UBERON:0001173,3.59e-07,1;UBERON:0004912,3.59e-07,1;UBERON:0005171,3.59e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0.342401459862411,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,2.17608642603403,1.00828139742739,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0.302286240427142,3.76823835312181,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,2.51611761462433,1.19980546198682,3.93917703926501,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,2.80885274925294,3.60287069960601,4.26245249093389,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.771494018793504,0.442655759869801,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,1.11642284300551,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,1.19021820443007,0.390267295715598,0.315270288212382,0.8858587585951,0.797273843287435,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,3.39956859987711,2.23922323717853,3.04039942369732,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.41326727862668,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.405450430580328,0,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0.354951612318675,0,0,0.282328141245992,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0,0.492522411877817,0.409231043169689,0,0.192906610981141,0,0,0.429742108096597,0.57386499620653,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0.342401459862411,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,2.17608642603403,1.00828139742739,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0.302286240427142,3.76823835312181,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,2.51611761462433,1.19980546198682,3.93917703926501,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,2.80885274925294,3.60287069960601,4.26245249093389,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.771494018793504,0.442655759869801,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,1.11642284300551,0,0,0,0,0,0,0.325929952884052,0,0,0.335012514883631,1.19021820443007,0.390267295715598,0.315270288212382,0.8858587585951,0.797273843287435,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,3.39956859987711,2.23922323717853,3.04039942369732,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.41326727862668,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.405450430580328,0,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0.354951612318675,0,0,0.282328141245992,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0,0.492522411877817,0.409231043169689,0,0.192906610981141,0,0,0.429742108096597,0.57386499620653,0,0.463735671240843 | ||
|short_description=p7@Slk | |||
}} | }} |
Latest revision as of 22:02, 25 September 2015
Short description: | p7@Slk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Slk_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | -252bp_to_ENSMUST00000026043_5end |
EntrezGene: | Slk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.78e-10 | 19 |
hematopoietic cell | 2.24e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.24e-10 | 32 |
hematopoietic stem cell | 2.24e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.24e-10 | 32 |
connective tissue cell | 7.40e-09 | 46 |
mesenchymal cell | 7.40e-09 | 46 |
granulocyte monocyte progenitor cell | 4.95e-08 | 7 |
motile cell | 2.24e-07 | 54 |
lining cell | 3.59e-07 | 1 |
meso-epithelial cell | 3.59e-07 | 1 |
endothelial cell | 3.59e-07 | 1 |
endothelial cell of sinusoid | 3.59e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.59e-07 | 1 |
stem cell | 8.96e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.40e-09 | 46 |
bile duct | 3.59e-07 | 1 |
hepatic sinusoid | 3.59e-07 | 1 |
parenchyma | 3.59e-07 | 1 |
abdomen blood vessel | 3.59e-07 | 1 |
sinusoid | 3.59e-07 | 1 |
digestive system duct | 3.59e-07 | 1 |
abdominal segment blood vessel | 3.59e-07 | 1 |
trunk blood vessel | 3.59e-07 | 1 |
liver parenchyma | 3.59e-07 | 1 |
liver lobule | 3.59e-07 | 1 |
biliary system | 3.59e-07 | 1 |
biliary tree | 3.59e-07 | 1 |
biliary bud | 3.59e-07 | 1 |
hepatic duct | 3.59e-07 | 1 |