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FFCP PHASE1:Mm9::chr2:113669172..113669225,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:113669172..113669225,-
|DHSsupport=NA
|short_description=p1@Scg5
|DPIdataset=NA
|description=CAGE_peak_1_at_Scg5_5end
|association_with_transcript=22bp_to_NM_009162,uc008lpq.1_5end
|EntrezGene=20394
|EntrezGene=20394
|HGNC=
|HGNC=
|MCL_coexpression_id=278
|TSSclassifier=NA
|UniProt=P12961,Q3TT51
|UniProt=P12961,Q3TT51
|association_with_transcript=22bp_to_NM_009162,uc008lpq.1_5end
|cluster_id=chr2:113669172..113669225,-
|description=CAGE_peak_1_at_Scg5_5end
|id=chr2:113669172..113669225,-
|ontology_enrichment_celltype=CL:0000221!4.20e-15!44;CL:0000133!4.20e-15!44;CL:0002319!8.35e-15!43;CL:0000540!8.75e-14!33;CL:0000047!8.75e-14!33;CL:0000031!8.75e-14!33;CL:0000404!8.75e-14!33;CL:0000117!5.04e-13!23;CL:0000337!5.04e-13!23;CL:0000055!2.07e-09!50;CL:0000393!1.04e-08!39;CL:0000211!1.04e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000221,5.64e-16,44;CL:0000133,5.64e-16,44;CL:0002319,1.16e-15,43;CL:0000540,2.07e-14,33;CL:0000047,2.07e-14,33;CL:0000031,2.07e-14,33;CL:0000404,2.07e-14,33;CL:0000117,1.31e-13,23;CL:0000337,1.31e-13,23;CL:0000393,1.76e-09,39;CL:0000211,1.76e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.55e-34!73;UBERON:0005743!2.55e-34!73;UBERON:0000073!4.53e-34!75;UBERON:0001016!4.53e-34!75;UBERON:0004121!1.67e-31!102;UBERON:0000924!1.67e-31!102;UBERON:0006601!1.67e-31!102;UBERON:0002346!3.98e-31!71;UBERON:0003075!3.98e-31!71;UBERON:0007284!3.98e-31!71;UBERON:0000033!1.83e-27!63;UBERON:0001049!1.15e-26!52;UBERON:0005068!1.15e-26!52;UBERON:0006241!1.15e-26!52;UBERON:0007135!1.15e-26!52;UBERON:0000955!7.09e-26!50;UBERON:0006238!7.09e-26!50;UBERON:0002616!2.79e-25!49;UBERON:0003056!6.57e-24!49;UBERON:0003080!2.25e-21!40;UBERON:0002780!9.96e-21!39;UBERON:0001890!9.96e-21!39;UBERON:0006240!9.96e-21!39;UBERON:0002020!4.80e-19!34;UBERON:0002791!3.10e-16!29;UBERON:0003528!3.10e-16!29;UBERON:0001893!3.10e-16!29;UBERON:0007811!7.27e-16!86;UBERON:0000153!6.49e-13!94;UBERON:0000956!1.14e-11!21;UBERON:0001869!1.14e-11!21;UBERON:0000203!1.14e-11!21;UBERON:0002619!4.55e-10!17;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.14e-36,73;UBERON:0001016,5.78e-36,75;UBERON:0002346,5.23e-32,64;UBERON:0003075,5.23e-32,64;UBERON:0007284,5.23e-32,64;UBERON:0004121,1.08e-31,95;UBERON:0000924,1.08e-31,95;UBERON:0006601,1.08e-31,95;UBERON:0000073,5.61e-30,54;UBERON:0001049,3.52e-28,52;UBERON:0005068,3.52e-28,52;UBERON:0006241,3.52e-28,52;UBERON:0007135,3.52e-28,52;UBERON:0010371,1.06e-25,73;UBERON:0003056,4.68e-25,49;UBERON:0000955,6.01e-25,47;UBERON:0006238,6.01e-25,47;UBERON:0002616,2.47e-24,46;UBERON:0003080,2.17e-22,40;UBERON:0002780,1.04e-21,39;UBERON:0001890,1.04e-21,39;UBERON:0006240,1.04e-21,39;UBERON:0002020,6.09e-20,34;UBERON:0010314,4.48e-18,92;UBERON:0003528,5.50e-17,29;UBERON:0002791,5.50e-17,29;UBERON:0001893,5.50e-17,29;UBERON:0000956,3.46e-12,21;UBERON:0001869,3.46e-12,21;UBERON:0000203,3.46e-12,21;UBERON:0002619,1.67e-10,17;UBERON:0002021,4.96e-08,10;UBERON:0000411,4.96e-08,10;UBERON:0001950,4.96e-08,10
|phase1_expression=34.7522998217403,32.1057375028212,55.0549079661339,0,0,28.0358384092856,95.54757000357,4.13194635013044,0,0,0,0,1.36960583944965,4.54586092578786,0,0,0,0,0.274228867211478,0,56.5537879504614,0,0,81.2761507790506,128.239788116548,68.3336037296874,99.5060211127463,98.4703533374513,2.85035129184561,1.76421090831952,90.9095093686749,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0.183546752161682,0,120.349886322006,32.7332412274363,28.5811951639197,22.2578410384326,37.3756667348926,0,1.45072428402269,0.672187598284928,0.257259436035947,0,0,123.615357585214,143.885546361993,127.400112104742,0.677689064138264,0.889294796111139,0.449949858640699,0,0,33.2556122675429,70.3119498738445,50.3931515819201,56.8375000376418,58.6806642170356,244.517242649656,240.746709637259,66.634994772935,70.6381121404402,71.6990653555816,372.191677777934,509.600166297984,522.262213071228,134.260240909337,134.120885521133,118.768248486941,612.52749980903,530.122378649843,456.561164357109,153.796121617255,162.873202834174,132.530005981789,7.04253597998612,9.21973033302783,0.869593466105033,0,0.679971333707751,0.539703191637817,0,0,15.0275529540974,0,0,0,31.2672391904231,0,0,0,0,0.253359865475099,0,10.2765491747154,1.03575153458869,41.7122410772158,9.71517829890361,11.8741536541735,8.99400439298628,16.5794904607885,18.34383831317,15.9596570988688,52.1581381919529,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,191.478641245552,161.483410953174,4.59822699375465,0,0,0,272.618963716777,223.26029417549,74.3873764508157,273.773304302835,280.519856691373,269.08551770463,259.586020908412,2.34230536855727,2.36373244159177,5.05445516867349,33.4602550859494,9.23855145035196,25.749035696549,28.2697543794398,28.3325057531144,41.8424469780666,48.6832137082429,45.7264415851477,74.7652741435755,1.07783996466421,0.945530400839096,0.703804496655795,0.43839146485515,0.278047249225598,0,0.205782136407943,2.7864797354589,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0,0.243206428637567,0.146199987425332,0.439100230582101,0.268412837520744,206.504729489973,60.0962936295021,4.29544417878937,2.3800550999719,3.41261200856374,4.41249676534833,4.76809606891745,5.04208811558356,3.7804267453628,4.94586627892654,6.16887780007865,8.39964669092456,7.79139147280835,8.75408476981064,8.96834800747953,3.59527763461689,5.40345124686736,6.57166201739412,4.1726938209678,4.79843752960861,2.25415471346161,3.86937522906097,6.7883370508669,17.8144982521409,13.8488016302123,10.4803205065518,13.6588893221996,34.9213973898695,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.947457058852424,0.325929952884052,0.509235257325564,0,0.670025029767263,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.797273843287435,1.96635977658886,0.518054945597687,0.723245292907558,0,0,0,0,275.825913599027,259.272250741953,0,0.252470927204373,24.9251493338843,18.7410597262386,26.7125013188671,7.40803273652911,9.80314165962534,12.1722908239198,12.1443210502468,23.0882127749936,17.7879500075936,160.339336894482,2.55492153374884,1.78065603667255,2.93196526836437,1.15479086080775,21.2392221343941,7.04063844849446,11.1859716076958,9.05304382828311,16.2416041084425,23.3650712437385,20.6742634534577,31.627434464543,26.7373033788541,16.1178746547266,16.8669773719998,14.4389760547462,941.996389120731,17.2858650270058,23.0258457133303,41.1527107260657,84.0592707464377,72.4177399464406,100.210353546692,130.310998221048,0.23467170806371,3.38931313382112,5.07215315526412,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,5.53813589596716,206.192935835687,0.341741761595705,1.03193433981611,0,0,0.136694227721025,0,0,0,0,15.2747298882418,4.58687190692646,6.50622294805916,6.15630442684267,6.89991376847747,6.11415178489297,5.39457385539283,8.01738520535759,8.63794608547298,5.83267379813068,0,1.69107881605257,0.747582730219894,0.330916980914195,0.777804753376191,0.904118764344118,1.01373675294467,1.5256441023948,0.39061315453185,0.524296722128554,0.483168241652012,0.864090018773596,2.21207784439725,1.21635129174099,1.54066435747241,2.20865399062252,1.79026695667481,0.39736270956253,3.00488623799922,2.06765338044408,2.22126189885925,2.13379058634,1.61321896218945,2.63136277997332,2.50150788264857,3.03879945672079,0.906921534460845,0,0,0,2.89784391048286,6.38120416534019,0.73260649706906,1.07184189539533,0,306.09549869845,321.307015082009,285.874861206259,237.67295118132,334.320269648073,277.22956034202,299.03496760269,329.184799556905,342.122518783074,332.91988045642,4.67043064128795,11.1726964552289,13.3172212488225,11.1829089851415,9.22297915563122,7.35374033800057,14.2237905793034,15.4526292929171,15.0832028508153,14.6564382823003,15.4622372933046,13.9583492625696,12.735245015904,11.9727034997106,14.8183509905482,15.24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|phase1_expression=34.7522998217403,32.1057375028212,55.0549079661339,0,0,28.0358384092856,95.54757000357,4.13194635013044,0,0,0,0,1.36960583944965,4.54586092578786,0,0,0,0,0.274228867211478,0,56.5537879504614,0,0,81.2761507790506,128.239788116548,68.3336037296874,99.5060211127463,98.4703533374513,2.85035129184561,1.76421090831952,90.9095093686749,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0.183546752161682,0,120.349886322006,32.7332412274363,28.5811951639197,22.2578410384326,37.3756667348926,0,1.45072428402269,0.672187598284928,0.257259436035947,0,0,123.615357585214,143.885546361993,127.400112104742,0.677689064138264,0.889294796111139,0.449949858640699,0,0,33.2556122675429,70.3119498738445,50.3931515819201,56.8375000376418,58.6806642170356,244.517242649656,240.746709637259,66.634994772935,70.6381121404402,71.6990653555816,372.191677777934,509.600166297984,522.262213071228,134.260240909337,134.120885521133,118.768248486941,612.52749980903,530.122378649843,456.561164357109,153.796121617255,162.873202834174,132.530005981789,7.04253597998612,9.21973033302783,0.869593466105033,0,0.679971333707751,0.539703191637817,0,0,15.0275529540974,0,0,0,31.2672391904231,0,0,0,0,0.253359865475099,0,10.2765491747154,1.03575153458869,41.7122410772158,9.71517829890361,11.8741536541735,8.99400439298628,16.5794904607885,18.34383831317,15.9596570988688,52.1581381919529,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,191.478641245552,161.483410953174,4.59822699375465,0,0,0,272.618963716777,223.26029417549,74.3873764508157,273.773304302835,280.519856691373,269.08551770463,259.586020908412,2.34230536855727,2.36373244159177,5.05445516867349,33.4602550859494,9.23855145035196,25.749035696549,28.2697543794398,28.3325057531144,41.8424469780666,48.6832137082429,45.7264415851477,74.7652741435755,1.07783996466421,0.945530400839096,0.703804496655795,0.43839146485515,0.278047249225598,0,0.205782136407943,2.7864797354589,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0,0.243206428637567,0.146199987425332,0.439100230582101,0.268412837520744,206.504729489973,60.0962936295021,4.29544417878937,2.3800550999719,3.41261200856374,4.41249676534833,4.76809606891745,5.04208811558356,3.7804267453628,4.94586627892654,6.16887780007865,8.39964669092456,7.79139147280835,8.75408476981064,8.96834800747953,3.59527763461689,5.40345124686736,6.57166201739412,4.1726938209678,4.79843752960861,2.25415471346161,3.86937522906097,6.7883370508669,17.8144982521409,13.8488016302123,10.4803205065518,13.6588893221996,34.9213973898695,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.947457058852424,0.325929952884052,0.509235257325564,0,0.670025029767263,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.797273843287435,1.96635977658886,0.518054945597687,0.723245292907558,0,0,0,0,275.825913599027,259.272250741953,0,0.252470927204373,24.9251493338843,18.7410597262386,26.7125013188671,7.40803273652911,9.80314165962534,12.1722908239198,12.1443210502468,23.0882127749936,17.7879500075936,160.339336894482,2.55492153374884,1.78065603667255,2.93196526836437,1.15479086080775,21.2392221343941,7.04063844849446,11.1859716076958,9.05304382828311,16.2416041084425,23.3650712437385,20.6742634534577,31.627434464543,26.7373033788541,16.1178746547266,16.8669773719998,14.4389760547462,941.996389120731,17.2858650270058,23.0258457133303,41.1527107260657,84.0592707464377,72.4177399464406,100.210353546692,130.310998221048,0.23467170806371,3.38931313382112,5.07215315526412,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,5.53813589596716,206.192935835687,0.341741761595705,1.03193433981611,0,0,0.136694227721025,0,0,0,0,15.2747298882418,4.58687190692646,6.50622294805916,6.15630442684267,6.89991376847747,6.11415178489297,5.39457385539283,8.01738520535759,8.63794608547298,5.83267379813068,0,1.69107881605257,0.747582730219894,0.330916980914195,0.777804753376191,0.904118764344118,1.01373675294467,1.5256441023948,0.39061315453185,0.524296722128554,0.483168241652012,0.864090018773596,2.21207784439725,1.21635129174099,1.54066435747241,2.20865399062252,1.79026695667481,0.39736270956253,3.00488623799922,2.06765338044408,2.22126189885925,2.13379058634,1.61321896218945,2.63136277997332,2.50150788264857,3.03879945672079,0.906921534460845,0,0,0,2.89784391048286,6.38120416534019,0.73260649706906,1.07184189539533,0,306.09549869845,321.307015082009,285.874861206259,237.67295118132,334.320269648073,277.22956034202,299.03496760269,329.184799556905,342.122518783074,332.91988045642,4.67043064128795,11.1726964552289,13.3172212488225,11.1829089851415,9.22297915563122,7.35374033800057,14.2237905793034,15.4526292929171,15.0832028508153,14.6564382823003,15.4622372933046,13.9583492625696,12.735245015904,11.9727034997106,14.8183509905482,15.24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|short_description=p1@Scg5
}}
}}

Latest revision as of 23:34, 1 October 2015

Short description:p1@Scg5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scg5_5end
Coexpression cluster:MCL_coexpression_mm9:278
Association with transcript: 22bp_to_NM_009162, uc008lpq.1_5end
EntrezGene:Scg5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scg5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.75
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I532.11
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I655.05
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I895.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A356.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D181.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2128.24
GP2+ M cell, pool1.CNhs13228.11845-124H968.33
GP2+ M cell, pool2.CNhs13231.11846-124I199.51
GP2+ M cell, pool3.CNhs13240.11847-124I298.47
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C890.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2120.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3123.62
Mouse Granule cells, donor2.CNhs12357.11731-123E3143.89
Mouse Granule cells, donor3.CNhs12108.11636-122C7127.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C833.26
Mouse Microglia, donor2.CNhs12634.11736-123E870.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D550.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F556.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D958.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1244.52
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5240.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D266.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F270.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D671.70
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3372.19
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3509.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7522.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4134.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4134.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8118.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4612.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5530.12
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6456.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6153.80
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6162.87
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1132.53
Mouse Schwann, donor1.CNhs12507.11728-123D97.04
Mouse Schwann, donor2.CNhs12573.11746-123F99.22
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.28
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D741.71
adrenal gland, embryo E14.CNhs11038.406-44C59.72
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F516.58
adrenal gland, neonate N00.CNhs11191.1311-23C118.34
adrenal gland, neonate N25.CNhs11223.1377-27I315.96
amnion, adult pregnant day17.5.CNhs10488.583-22A852.16
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2191.48
cerebellum, neonate N30.CNhs11135.1395-42I2161.48
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4272.62
corpus striatum, adult.CNhs10487.19-21D8223.26
corpus striatum, neonate N00.CNhs11226.630-43F174.39
cortex, adult.CNhs10473.12-14D5273.77
cortex, neonate N30.CNhs11107.1392-42F2280.52
diencephalon, adult.CNhs10482.20-12F2269.09
diencephalon, neonate N30.CNhs11201.1388-42B2259.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G433.46
eyeball, embryo E12.CNhs11016.345-16C69.24
eyeball, embryo E14.CNhs10521.399-16E225.75
eyeball, embryo E15.CNhs10593.426-16C928.27
eyeball, embryo E17.CNhs11023.1261-18D428.33
eyeball, neonate N00.CNhs11207.633-15C641.84
eyeball, neonate N01.CNhs11140.1532-43E748.68
eyeball, neonate N02.CNhs11205.1551-44G845.73
eyeball, neonate N16.CNhs11188.777-19A274.77
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E8206.50
hippocampus, neonate N00.CNhs11228.627-43G160.10
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G16.57
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F84.80
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G717.81
kidney, neonate N10.CNhs11206.758-6D513.85
kidney, neonate N20.CNhs11113.832-19I110.48
kidney, neonate N25.CNhs11122.1353-25F313.66
kidney, neonate N30.CNhs11203.1385-42H134.92
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2275.83
medulla oblongata, neonate N30.CNhs11200.1396-42A3259.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I9160.34
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I723.37
pancreas, neonate N00.CNhs11105.645-26G920.67
pancreas, neonate N01.CNhs11138.1531-43D731.63
pancreas, neonate N02.CNhs11139.1539-43D826.74
pancreas, neonate N16.CNhs11136.787-43B616.12
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G8942.00
pituitary gland, embryo E12.CNhs11018.346-16E617.29
pituitary gland, embryo E13.CNhs11009.370-44C723.03
pituitary gland, embryo E14.CNhs11037.398-44A541.15
pituitary gland, embryo E15.CNhs10592.427-16B984.06
pituitary gland, embryo E16.CNhs11036.449-43F672.42
pituitary gland, embryo E17.CNhs11039.1265-44F5100.21
pituitary gland, neonate N00.CNhs11190.1308-22E9130.31
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C9206.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D46.16
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1306.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2321.31
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3285.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7237.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4334.32
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5277.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6299.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7329.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8342.12
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9332.92
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H213.32
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.20
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell5.64e-1644
neurectodermal cell5.64e-1644
neural cell1.16e-1543
neuron2.07e-1433
neuronal stem cell2.07e-1433
neuroblast2.07e-1433
electrically signaling cell2.07e-1433
CNS neuron (sensu Vertebrata)1.31e-1323
neuroblast (sensu Vertebrata)1.31e-1323
electrically responsive cell1.76e-0939
electrically active cell1.76e-0939

Uber anatomy
Ontology termp-valuen
central nervous system3.14e-3673
nervous system5.78e-3675
neurectoderm5.23e-3264
neural plate5.23e-3264
presumptive neural plate5.23e-3264
ectoderm-derived structure1.08e-3195
ectoderm1.08e-3195
presumptive ectoderm1.08e-3195
regional part of nervous system5.61e-3054
neural tube3.52e-2852
neural rod3.52e-2852
future spinal cord3.52e-2852
neural keel3.52e-2852
ecto-epithelium1.06e-2573
pre-chordal neural plate4.68e-2549
brain6.01e-2547
future brain6.01e-2547
regional part of brain2.47e-2446
anterior neural tube2.17e-2240
regional part of forebrain1.04e-2139
forebrain1.04e-2139
future forebrain1.04e-2139
gray matter6.09e-2034
structure with developmental contribution from neural crest4.48e-1892
brain grey matter5.50e-1729
regional part of telencephalon5.50e-1729
telencephalon5.50e-1729
cerebral cortex3.46e-1221
cerebral hemisphere3.46e-1221
pallium3.46e-1221
regional part of cerebral cortex1.67e-1017
occipital lobe4.96e-0810
visual cortex4.96e-0810
neocortex4.96e-0810
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