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FFCP PHASE1:Mm9::chr2:132078963..132078972,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:132078963..132078972,-
|DHSsupport=NA
|short_description=p2@Pcna
|DPIdataset=NA
|description=CAGE_peak_2_at_Pcna_5end
|association_with_transcript=-47bp_to_ENSMUST00000169856,NM_011045,uc008mml.1_5end
|EntrezGene=18538
|EntrezGene=18538
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9Q7Z3,P17918,Q542J9
|UniProt=E9Q7Z3,P17918,Q542J9
|association_with_transcript=-47bp_to_ENSMUST00000169856,NM_011045,uc008mml.1_5end
|cluster_id=chr2:132078963..132078972,-
|description=CAGE_peak_2_at_Pcna_5end
|id=chr2:132078963..132078972,-
|ontology_enrichment_celltype=CL:0000117!5.81e-11!23;CL:0000337!5.81e-11!23;CL:0000540!6.62e-07!33;CL:0000047!6.62e-07!33;CL:0000031!6.62e-07!33;CL:0000404!6.62e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.51e-11,23;CL:0000337,2.51e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!3.49e-15!34;UBERON:0001049!5.36e-15!52;UBERON:0005068!5.36e-15!52;UBERON:0006241!5.36e-15!52;UBERON:0007135!5.36e-15!52;UBERON:0000073!3.71e-13!75;UBERON:0001016!3.71e-13!75;UBERON:0003080!5.46e-13!40;UBERON:0002346!6.08e-13!71;UBERON:0003075!6.08e-13!71;UBERON:0007284!6.08e-13!71;UBERON:0001017!7.41e-13!73;UBERON:0005743!7.41e-13!73;UBERON:0002780!1.36e-12!39;UBERON:0001890!1.36e-12!39;UBERON:0006240!1.36e-12!39;UBERON:0000955!1.43e-12!50;UBERON:0006238!1.43e-12!50;UBERON:0002791!2.78e-12!29;UBERON:0003528!2.78e-12!29;UBERON:0001893!2.78e-12!29;UBERON:0002616!5.58e-12!49;UBERON:0003056!1.25e-10!49;UBERON:0000033!2.09e-10!63;UBERON:0004121!4.61e-10!102;UBERON:0000924!4.61e-10!102;UBERON:0006601!4.61e-10!102;UBERON:0000956!1.15e-08!21;UBERON:0001869!1.15e-08!21;UBERON:0000203!1.15e-08!21;UBERON:0002619!1.99e-07!17;UBERON:0000025!2.39e-07!114;UBERON:0004111!3.21e-07!122;UBERON:0007811!7.59e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.93e-15,34;UBERON:0001049,9.09e-15,52;UBERON:0005068,9.09e-15,52;UBERON:0006241,9.09e-15,52;UBERON:0007135,9.09e-15,52;UBERON:0000073,1.79e-14,54;UBERON:0003080,5.76e-13,40;UBERON:0001016,6.57e-13,75;UBERON:0002346,8.49e-13,64;UBERON:0003075,8.49e-13,64;UBERON:0007284,8.49e-13,64;UBERON:0001017,1.34e-12,73;UBERON:0002780,1.47e-12,39;UBERON:0001890,1.47e-12,39;UBERON:0006240,1.47e-12,39;UBERON:0003528,1.94e-12,29;UBERON:0002791,1.94e-12,29;UBERON:0001893,1.94e-12,29;UBERON:0000955,5.26e-12,47;UBERON:0006238,5.26e-12,47;UBERON:0002616,2.11e-11,46;UBERON:0010314,3.23e-11,92;UBERON:0003056,1.81e-10,49;UBERON:0010371,1.52e-09,73;UBERON:0004121,3.31e-09,95;UBERON:0000924,3.31e-09,95;UBERON:0006601,3.31e-09,95;UBERON:0000956,1.07e-08,21;UBERON:0001869,1.07e-08,21;UBERON:0000203,1.07e-08,21;UBERON:0002619,2.08e-07,17;UBERON:0000025,5.80e-07,114
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|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.839396359559449,0.233612640595526,1.29123323441576,0.563154888606667,1.63845168425395,2.05461561870606,2.15384829287408,0.856003649656029,1.48614684112296,2.33176833270964,2.42970320867791,3.49780939064073,1.26184866143295,1.23402990245165,1.69755860719212,1.7008658030214,1.19149141441062,1.56719873483361,1.27993938234725,0.91763712426868,0.57423196411502,1.29228598847722,0.430942465371778,0.570070258369122,0.756090389279792,1.55211357458713,0.635030673459631,0.61506478758457,0,2.59966457776147,1.32987716286794,1.83752420636132,1.25559489221072,0,1.0470474879476,0,0,0,1.38486499773135,0.912392380975631,1.10128051297009,0.782391344348039,1.74420125104357,0.878744730937887,2.13872888981712,2.37976916763116,0,1.17447824240415,0.725362142011344,0.672187598284928,1.02903774414379,0.85960031981627,0.515672092277442,3.23706337375356,2.64495489636016,4.43681982454325,2.37191172448392,2.66788438833342,0.449949858640699,0,0.7104801149461,1.19840044207362,0.384218305321555,1.65903379693564,2.29510095163874,3.36519938162211,3.42781181284564,4.19650227808066,2.81728838194394,2.39613677545591,5.51531271966013,1.10115880999389,2.42605942361857,1.99688493233117,3.16527090552465,2.56165402086747,3.12548022334056,2.23346399201105,3.37657566019008,2.44477196442896,3.24091444021034,2.98980529678116,2.60959224155421,1.66597625333005,1.88928900266964,0.579728977403356,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,1.82577746171277,0.681721290312231,1.81850203222008,1.06001872353102,1.12674735821344,0,0,0,1.94841936910093,2.28023878927589,3.53867111510348,0.68510327831436,0.776813650941515,2.3750742250372,1.38788261412909,1.52232739156071,0.691846491768175,1.20578112442098,1.41106448562846,2.26199864393416,0.741584903203122,1.15679485535929,1.76922110389975,2.42650274921114,1.54589062922275,1.45462575940567,0,1.75668478206928,0.83778682725382,1.02182822083437,0.718890747035522,2.39961092397363,0.508280908292259,2.39665023047716,2.74500361691176,2.1361239859187,2.43354048269187,2.30143911597297,3.32460871295296,1.62241263067758,2.44414473240759,1.61729061793121,3.79084137650512,1.26265113531884,1.30120442962704,1.83921683546778,1.80062129805349,1.05493372485001,1.08858398642125,0.896796041993948,1.40552586839593,0.517406741478031,1.29340795759705,1.51284864134255,1.23165786914764,2.19195732427575,0.556094498451196,1.0447564995665,1.02891068203972,1.59227413454795,0.702213187313235,2.05878325691772,1.42081749697796,1.86413195281952,1.87620847984877,2.34080679899319,1.42046841351126,0.787056926989615,0.925602677324269,3.0229412817553,0.804820204198858,2.45207218971056,1.6455984991348,1.80584210487005,1.94565142910054,1.90059983652932,1.97595103761946,1.07365135008297,2.10289948564127,2.36680608472354,0.330418782983798,0.793351699990633,2.34617075588757,1.85789337488351,0.644337306610467,1.4117846723634,1.33426826306922,1.71203063501303,0.474529061544512,0.658795818896044,1.50801125280162,1.39269530428806,2.33956904542944,0,0.432276099749388,0.199141273254367,2.0863469104839,1.02823661348756,1.1270773567308,1.62921062276251,2.13347735884388,1.8936671370386,2.02356918797623,1.18088118383682,1.56998727841375,0.987177311374404,0.296452627087149,1.33476084572875,0.982794975566015,2.02375901146368,2.23146133527353,1.68824011826692,2.5462585178142,1.15078454980324,1.29708181420028,1.64736847912849,4.31304619582064,1.86070473834252,1.24815069245824,1.01031551178845,0.358794827043824,0,0.923765950833023,2.4633883530163,1.95557971730431,2.37643120085263,1.17345124144251,1.17254380209271,0.952174563544055,0.195133647857799,0.630540576424764,0.44292937929755,0.637819074629948,0.81931657357869,1.20879487306127,1.15719246865209,0,0.54390568381871,0.491764273019036,0.827810238914197,1.12385412991454,1.87538698547525,1.47541450839008,0.504941854408746,1.89304931649754,1.95219372148319,1.29254038639679,0.716906393857656,0.891194696329576,0.849229592366497,1.21443210502468,1.16902343164525,0,3.85585579706168,1.98716119291576,1.42452482933804,1.30309567482861,0.659880491890142,2.65490276679926,1.69946445308487,0.604647113929502,2.26326095707078,1.18120757152309,1.22974059177571,0.516856586336442,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,3.74483566329167,1.26042765821917,2.8458910432206,1.07168517515796,0.886701168211368,1.42695054081656,1.97458824722545,1.8267896946876,1.64270195644597,1.90648863777438,1.7642271844397,1.15420377059036,1.29171541356724,0.965006798850494,1.67121281604391,0.820704498725306,0.291480836629851,3.33765543618917,2.73393409276564,0.82554747185289,0.925972636848558,2.0720530270516,3.00727300986255,2.74533807847827,1.01987057996313,1.11961161858926,0.829199842826543,0.954670618015114,1.10717597753397,0.609958401380546,1.62008011232702,1.46361807210128,0.87345025498471,1.34864346384821,1.07449492442937,1.04702376793612,1.03691978633434,2.4853572523477,2.81846469342095,1.79419855252775,2.97825282822776,1.94451188344048,2.0665571756437,0.506868376472335,1.87771581833206,2.0832701575032,1.67774951081137,2.17425708743405,1.72818003754719,0.948033361884535,0.810900861160657,2.36235201479103,1.55904987573354,1.43221356533985,0.79472541912506,1.20195449519969,0.738447635872886,1.71642964911851,1.82896335972,0.907435666231565,0.877120926657772,1.6356013078856,1.05189211963412,1.36038230169127,3.10780334723691,2.51198798506532,1.67884616364078,0.19318959403219,0.563047426353546,0.549454872801795,0.857473516316263,3.00943262421218,2.82375921308533,1.38097570952153,1.71868654031819,3.26521046453006,4.11049511862385,3.7769694869485,3.37511250115903,4.5032120322422,7.70342095273148,3.10656187051092,1.24544817101012,0,1.36586884603307,1.94485373654635,1.67690530102386,1.65459157605013,1.11123363900808,0.618105171716683,1.28367683836726,0.758091635291392,1.2673964994512,1.50901073108861,0.936415074698824,0.640251524048693,0.804096565378586,0.476293691283074,0.347652977834566,1.54327376370964,1.23625770240992,1.17759136107518,0.685738504770831,1.59728225543404,0.476872379894642,1.30811774969096,0.846984423737976,1.35383372626682,1.28049581010941,1.31534855718921,0.543216455383447,1.68342681497322,1.54225523561426,0.689531376628944,0.818462086339379,1.39443157067369,0.771626443924566,0.499621155875892,1.16965804222704,1.07435527024149,1.14772999241306,0.661774257358546,0.463735671240843
|short_description=p2@Pcna
}}
}}

Latest revision as of 18:43, 25 September 2015

Short description:p2@Pcna
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pcna_5end
Coexpression cluster:NA
Association with transcript: -47bp_to_ENSMUST00000169856, NM_011045, uc008mml.1_5end
EntrezGene:Pcna
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pcna

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.51e-1123
neuroblast (sensu Vertebrata)2.51e-1123

Uber anatomy
Ontology termp-valuen
gray matter1.93e-1534
neural tube9.09e-1552
neural rod9.09e-1552
future spinal cord9.09e-1552
neural keel9.09e-1552
regional part of nervous system1.79e-1454
anterior neural tube5.76e-1340
nervous system6.57e-1375
neurectoderm8.49e-1364
neural plate8.49e-1364
presumptive neural plate8.49e-1364
central nervous system1.34e-1273
regional part of forebrain1.47e-1239
forebrain1.47e-1239
future forebrain1.47e-1239
brain grey matter1.94e-1229
regional part of telencephalon1.94e-1229
telencephalon1.94e-1229
brain5.26e-1247
future brain5.26e-1247
regional part of brain2.11e-1146
structure with developmental contribution from neural crest3.23e-1192
pre-chordal neural plate1.81e-1049
ecto-epithelium1.52e-0973
ectoderm-derived structure3.31e-0995
ectoderm3.31e-0995
presumptive ectoderm3.31e-0995
cerebral cortex1.07e-0821
cerebral hemisphere1.07e-0821
pallium1.07e-0821
regional part of cerebral cortex2.08e-0717
tube5.80e-07114
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