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FFCP PHASE1:Mm9::chr2:25174629..25174690,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:25174629..25174690,-
|DHSsupport=NA
|short_description=p1@Grin1
|DPIdataset=NA
|description=CAGE_peak_1_at_Grin1_5end
|association_with_transcript=0bp_to_ENSMUST00000028335,ENSMUST00000114307,ENSMUST00000114314,ENSMUST00000144402,ENSMUST00000155627,NM_001177656,NM_001177657,NM_008169,uc008irh.2,uc008iri.2,uc008irk.2,uc008irl.2,uc008irm.2_5end
|EntrezGene=14810
|EntrezGene=14810
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P35438,A2AI19,A2AI17,A2AI16,Q3TZ31
|UniProt=P35438,A2AI19,A2AI17,A2AI16,Q3TZ31
|association_with_transcript=0bp_to_ENSMUST00000028335,ENSMUST00000114307,ENSMUST00000114314,ENSMUST00000144402,ENSMUST00000155627,NM_001177656,NM_001177657,NM_008169,uc008irh.2,uc008iri.2,uc008irk.2,uc008irl.2,uc008irm.2_5end
|cluster_id=chr2:25174629..25174690,-
|description=CAGE_peak_1_at_Grin1_5end
|id=chr2:25174629..25174690,-
|ontology_enrichment_celltype=CL:0000540!1.47e-13!33;CL:0000047!1.47e-13!33;CL:0000031!1.47e-13!33;CL:0000404!1.47e-13!33;CL:0000117!3.19e-12!23;CL:0000337!3.19e-12!23;CL:0000221!5.20e-10!44;CL:0000133!5.20e-10!44;CL:0002319!7.61e-10!43;CL:0000393!5.46e-09!39;CL:0000211!5.46e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000540,5.16e-16,33;CL:0000047,5.16e-16,33;CL:0000031,5.16e-16,33;CL:0000404,5.16e-16,33;CL:0000117,2.10e-14,23;CL:0000337,2.10e-14,23;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002319,4.10e-12,43;CL:0000393,1.23e-11,39;CL:0000211,1.23e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.74e-27!75;UBERON:0001016!4.74e-27!75;UBERON:0001017!1.03e-26!73;UBERON:0005743!1.03e-26!73;UBERON:0004121!1.91e-26!102;UBERON:0000924!1.91e-26!102;UBERON:0006601!1.91e-26!102;UBERON:0002346!1.40e-25!71;UBERON:0003075!1.40e-25!71;UBERON:0007284!1.40e-25!71;UBERON:0001049!8.22e-22!52;UBERON:0005068!8.22e-22!52;UBERON:0006241!8.22e-22!52;UBERON:0007135!8.22e-22!52;UBERON:0000033!3.56e-21!63;UBERON:0000955!8.54e-21!50;UBERON:0006238!8.54e-21!50;UBERON:0002616!4.59e-20!49;UBERON:0003056!1.64e-18!49;UBERON:0002020!1.05e-17!34;UBERON:0003080!1.90e-17!40;UBERON:0002780!9.03e-17!39;UBERON:0001890!9.03e-17!39;UBERON:0006240!9.03e-17!39;UBERON:0002791!9.23e-15!29;UBERON:0003528!9.23e-15!29;UBERON:0001893!9.23e-15!29;UBERON:0007811!1.11e-13!86;UBERON:0000956!2.49e-10!21;UBERON:0001869!2.49e-10!21;UBERON:0000203!2.49e-10!21;UBERON:0000153!4.54e-10!94;UBERON:0002619!3.36e-09!17;UBERON:0002021!1.16e-08!10;UBERON:0000411!1.16e-08!10;UBERON:0001950!1.16e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.21e-32,75;UBERON:0001017,1.08e-31,73;UBERON:0000073,7.14e-27,54;UBERON:0004121,3.88e-26,95;UBERON:0000924,3.88e-26,95;UBERON:0006601,3.88e-26,95;UBERON:0002346,4.97e-26,64;UBERON:0003075,4.97e-26,64;UBERON:0007284,4.97e-26,64;UBERON:0001049,3.00e-25,52;UBERON:0005068,3.00e-25,52;UBERON:0006241,3.00e-25,52;UBERON:0007135,3.00e-25,52;UBERON:0000955,1.18e-21,47;UBERON:0006238,1.18e-21,47;UBERON:0010371,1.45e-21,73;UBERON:0002616,8.39e-21,46;UBERON:0002020,9.50e-21,34;UBERON:0003080,1.77e-19,40;UBERON:0003056,3.37e-19,49;UBERON:0002780,1.12e-18,39;UBERON:0001890,1.12e-18,39;UBERON:0006240,1.12e-18,39;UBERON:0010314,2.20e-17,92;UBERON:0003528,3.30e-17,29;UBERON:0002791,3.30e-17,29;UBERON:0001893,3.30e-17,29;UBERON:0000956,7.00e-12,21;UBERON:0001869,7.00e-12,21;UBERON:0000203,7.00e-12,21;UBERON:0002619,1.64e-10,17;UBERON:0002021,4.08e-10,10;UBERON:0000411,4.08e-10,10;UBERON:0001950,4.08e-10,10
|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,122.122164656936,0,0,0,0,0,0,0,0,0,0,1.27006134691926,3.69038872550742,15.8481681015439,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,73.2385588311744,88.3414935384295,73.5244428067168,0,0,0,1.97773272513395,0.7104801149461,1.79760066311043,1.53687322128622,9.22837549545451,10.9354810048669,9.67494822216357,385.343177960731,371.280017339662,21.6808714610469,16.6771119571731,32.1726575313507,601.232710256662,494.022311051591,442.079602711469,71.4823679497651,64.5902763833012,53.1331637967895,382.759891630893,258.870800614573,295.359012952574,322.618301093666,258.546972331171,128.429218173632,2.87759534666099,4.23200736597999,0,0,0,1.07940638327563,0,0,21.0666630197628,0,0,0,4.64783285263046,0,0,0,0,0,0,10.2765491747154,0,27.0164693097981,1.73485326766136,7.00270600117925,6.45723392316964,7.38540938707851,12.4644029563847,6.91166252313215,0,0.433798070759735,0.884610551949874,0,0,0,0,562.724691856194,468.113389728072,0.255457055208591,0.11981512450592,0,0,638.108123864545,764.483507309925,138.219787324151,844.264723173887,706.030377689043,516.145502685947,534.909444334397,0,0.124406970610093,0,18.9397670297827,0.130120442962704,0.459804208866946,0.720248519221397,3.91832526372859,10.1374383735478,12.5551445879153,13.0245397138023,62.6062157188418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,746.94989729978,86.9543974604953,0,0.793351699990633,0,0.464473343720877,1.15980715189884,0.605050573870028,1.55664630691409,1.52180500890047,0,1.64698954724011,2.26201687920243,2.78539060857611,1.75467678407208,0.898819408654221,0.216138049874694,0.796565093017469,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0,0,473.624240463986,409.889268012935,0,0,8.51872192423893,8.98009111882268,14.8642144435631,2.15071918157297,4.45597348164788,4.24614796183249,4.04810701674894,13.4437694639203,14.2303600060748,774.063051260133,0.141940085208269,0.35613120733451,0,0,0,0,0.302323556964751,0.943025398779491,0.885905678642318,2.15204603560749,2.58428293168221,1.81766864738753,0.356497378384721,3.16036757935816,0,0,117.451663985057,0.18006109403131,0.258717367565509,1.50035924522115,4.78818630834139,9.27517851530767,12.8348236069654,40.4938382322417,0,0,1.10264199027481,0,0.968786560175433,0.301564624640779,0.238744688006273,0.164140899745061,0.582961673259701,519.932546837469,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,1.90934123603023,0.316335993581135,1.62655573701479,0.972048067396211,0.627264888043406,0.87345025498471,1.75323650300267,2.56225712748541,1.83229159388821,0.518459893167171,0,0,0,0.330916980914195,0.194451188344048,0.774958940866387,1.18269287843545,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.457240839929999,0.403304740547362,0.38983152295901,0.0962118416403295,0.467507608726276,0.226730383615211,0,0,0,1.35232715822533,0,0,0.428736758158132,0,972.502672986589,870.014696998564,877.675926589156,1000.52922760495,802.916713171193,876.256920972053,751.300042758,788.962748048834,755.841538185653,815.472491009116,0.103787347584177,1.99512436700516,5.63420898988643,12.6415492875513,9.85181864351517,11.7659845408009,16.2240111295179,14.2164189494837,19.8969909946925,19.2049880940486,20.0248646913289,20.9375238938545,16.5745468221692,18.5672941974121,18.2070436589294,20.0043350338891,14.8331937209415,16.7831021803423,17.7196937345422,16.4862790550525,18.172070376427,15.795346748181,12.637118067208,18.4589949123057,15.9985946706062,15.1460148126101,15.9147336399312,18.9410192235247,15.3458648645824,14.0285567914435,16.4902675192602,14.7756723563345,15.9600106836179,16.1134314833405,15.8183421004536,46.9643886523338,16.1412809827332,23.4209448912645,17.7898148824024,11.0295709559758,15.3032771509478
|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,122.122164656936,0,0,0,0,0,0,0,0,0,0,1.27006134691926,3.69038872550742,15.8481681015439,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,73.2385588311744,88.3414935384295,73.5244428067168,0,0,0,1.97773272513395,0.7104801149461,1.79760066311043,1.53687322128622,9.22837549545451,10.9354810048669,9.67494822216357,385.343177960731,371.280017339662,21.6808714610469,16.6771119571731,32.1726575313507,601.232710256662,494.022311051591,442.079602711469,71.4823679497651,64.5902763833012,53.1331637967895,382.759891630893,258.870800614573,295.359012952574,322.618301093666,258.546972331171,128.429218173632,2.87759534666099,4.23200736597999,0,0,0,1.07940638327563,0,0,21.0666630197628,0,0,0,4.64783285263046,0,0,0,0,0,0,10.2765491747154,0,27.0164693097981,1.73485326766136,7.00270600117925,6.45723392316964,7.38540938707851,12.4644029563847,6.91166252313215,0,0.433798070759735,0.884610551949874,0,0,0,0,562.724691856194,468.113389728072,0.255457055208591,0.11981512450592,0,0,638.108123864545,764.483507309925,138.219787324151,844.264723173887,706.030377689043,516.145502685947,534.909444334397,0,0.124406970610093,0,18.9397670297827,0.130120442962704,0.459804208866946,0.720248519221397,3.91832526372859,10.1374383735478,12.5551445879153,13.0245397138023,62.6062157188418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,746.94989729978,86.9543974604953,0,0.793351699990633,0,0.464473343720877,1.15980715189884,0.605050573870028,1.55664630691409,1.52180500890047,0,1.64698954724011,2.26201687920243,2.78539060857611,1.75467678407208,0.898819408654221,0.216138049874694,0.796565093017469,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0,0,473.624240463986,409.889268012935,0,0,8.51872192423893,8.98009111882268,14.8642144435631,2.15071918157297,4.45597348164788,4.24614796183249,4.04810701674894,13.4437694639203,14.2303600060748,774.063051260133,0.141940085208269,0.35613120733451,0,0,0,0,0.302323556964751,0.943025398779491,0.885905678642318,2.15204603560749,2.58428293168221,1.81766864738753,0.356497378384721,3.16036757935816,0,0,117.451663985057,0.18006109403131,0.258717367565509,1.50035924522115,4.78818630834139,9.27517851530767,12.8348236069654,40.4938382322417,0,0,1.10264199027481,0,0.968786560175433,0.301564624640779,0.238744688006273,0.164140899745061,0.582961673259701,519.932546837469,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,1.90934123603023,0.316335993581135,1.62655573701479,0.972048067396211,0.627264888043406,0.87345025498471,1.75323650300267,2.56225712748541,1.83229159388821,0.518459893167171,0,0,0,0.330916980914195,0.194451188344048,0.774958940866387,1.18269287843545,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.457240839929999,0.403304740547362,0.38983152295901,0.0962118416403295,0.467507608726276,0.226730383615211,0,0,0,1.35232715822533,0,0,0.428736758158132,0,972.502672986589,870.014696998564,877.675926589156,1000.52922760495,802.916713171193,876.256920972053,751.300042758,788.962748048834,755.841538185653,815.472491009116,0.103787347584177,1.99512436700516,5.63420898988643,12.6415492875513,9.85181864351517,11.7659845408009,16.2240111295179,14.2164189494837,19.8969909946925,19.2049880940486,20.0248646913289,20.9375238938545,16.5745468221692,18.5672941974121,18.2070436589294,20.0043350338891,14.8331937209415,16.7831021803423,17.7196937345422,16.4862790550525,18.172070376427,15.795346748181,12.637118067208,18.4589949123057,15.9985946706062,15.1460148126101,15.9147336399312,18.9410192235247,15.3458648645824,14.0285567914435,16.4902675192602,14.7756723563345,15.9600106836179,16.1134314833405,15.8183421004536,46.9643886523338,16.1412809827332,23.4209448912645,17.7898148824024,11.0295709559758,15.3032771509478
|short_description=p1@Grin1
}}
}}

Latest revision as of 10:09, 26 September 2015

Short description:p1@Grin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grin1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000028335, ENSMUST00000114307, ENSMUST00000114314, ENSMUST00000144402, ENSMUST00000155627, NM_001177656, NM_001177657, NM_008169, uc008irh.2, uc008iri.2, uc008irk.2, uc008irl.2, uc008irm.2_5end
EntrezGene:Grin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3122.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C373.24
Mouse Granule cells, donor2.CNhs12357.11731-123E388.34
Mouse Granule cells, donor3.CNhs12108.11636-122C773.52
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1385.34
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5371.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3601.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3494.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7442.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D471.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F464.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4382.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5258.87
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6295.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6322.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6258.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1128.43
Mouse Schwann, donor1.CNhs12507.11728-123D92.88
Mouse Schwann, donor2.CNhs12573.11746-123F94.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D727.02
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F57.39
adrenal gland, neonate N00.CNhs11191.1311-23C112.46
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2562.72
cerebellum, neonate N30.CNhs11135.1395-42I2468.11
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4638.11
corpus striatum, adult.CNhs10487.19-21D8764.48
corpus striatum, neonate N00.CNhs11226.630-43F1138.22
cortex, adult.CNhs10473.12-14D5844.26
cortex, neonate N30.CNhs11107.1392-42F2706.03
diencephalon, adult.CNhs10482.20-12F2516.15
diencephalon, neonate N30.CNhs11201.1388-42B2534.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G418.94
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C610.14
eyeball, neonate N01.CNhs11140.1532-43E712.56
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A262.61
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8746.95
hippocampus, neonate N00.CNhs11228.627-43G186.95
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2473.62
medulla oblongata, neonate N30.CNhs11200.1396-42A3409.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.23
olfactory brain, adult.CNhs10489.18-22I9774.06
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G8117.45
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F512.83
pituitary gland, neonate N00.CNhs11190.1308-22E940.49
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C9519.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1972.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2870.01
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3877.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71000.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4802.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5876.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6751.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7788.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8755.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9815.47
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D212.64
whole body, embryo E14.CNhs10519.395-14B19.85
whole body, embryo E16.CNhs10514.453-14F211.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F915.82
whole body, embryo E17.CNhs10517.475-3I546.96
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C223.42
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D111.03
whole body, neonate N10.CNhs10518.761-6B415.30





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.16e-1633
neuronal stem cell5.16e-1633
neuroblast5.16e-1633
electrically signaling cell5.16e-1633
CNS neuron (sensu Vertebrata)2.10e-1423
neuroblast (sensu Vertebrata)2.10e-1423
ectodermal cell2.60e-1244
neurectodermal cell2.60e-1244
neural cell4.10e-1243
electrically responsive cell1.23e-1139
electrically active cell1.23e-1139

Uber anatomy
Ontology termp-valuen
nervous system4.21e-3275
central nervous system1.08e-3173
regional part of nervous system7.14e-2754
ectoderm-derived structure3.88e-2695
ectoderm3.88e-2695
presumptive ectoderm3.88e-2695
neurectoderm4.97e-2664
neural plate4.97e-2664
presumptive neural plate4.97e-2664
neural tube3.00e-2552
neural rod3.00e-2552
future spinal cord3.00e-2552
neural keel3.00e-2552
brain1.18e-2147
future brain1.18e-2147
ecto-epithelium1.45e-2173
regional part of brain8.39e-2146
gray matter9.50e-2134
anterior neural tube1.77e-1940
pre-chordal neural plate3.37e-1949
regional part of forebrain1.12e-1839
forebrain1.12e-1839
future forebrain1.12e-1839
structure with developmental contribution from neural crest2.20e-1792
brain grey matter3.30e-1729
regional part of telencephalon3.30e-1729
telencephalon3.30e-1729
cerebral cortex7.00e-1221
cerebral hemisphere7.00e-1221
pallium7.00e-1221
regional part of cerebral cortex1.64e-1017
occipital lobe4.08e-1010
visual cortex4.08e-1010
neocortex4.08e-1010
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