FFCP PHASE1:Mm9::chr3:32716442..32716498,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:32716442..32716498,+ to FFCP PHASE1:Mm9::chr3:32716442..32716498,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72607 | |EntrezGene=72607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=405 | |||
|TSSclassifier=NA | |||
|UniProt=Q5BKP2,D3YYG7 | |UniProt=Q5BKP2,D3YYG7 | ||
|association_with_transcript=0bp_to_ENSMUST00000072312,ENSMUST00000108228_5end | |||
|cluster_id=chr3:32716442..32716498,+ | |||
|description=CAGE_peak_4_at_Usp13_5end | |||
|id=chr3:32716442..32716498,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.84e-09!23;CL:0000337!1.84e-09!23;CL:0000540!4.05e-08!33;CL:0000047!4.05e-08!33;CL:0000031!4.05e-08!33;CL:0000404!4.05e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.48e-11,23;CL:0000337,6.48e-11,23;CL:0000540,1.60e-07,33;CL:0000047,1.60e-07,33;CL:0000031,1.60e-07,33;CL:0000404,1.60e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.13e-17!71;UBERON:0003075!5.13e-17!71;UBERON:0007284!5.13e-17!71;UBERON:0001049!1.22e-16!52;UBERON:0005068!1.22e-16!52;UBERON:0006241!1.22e-16!52;UBERON:0007135!1.22e-16!52;UBERON:0000033!1.36e-16!63;UBERON:0001017!1.72e-16!73;UBERON:0005743!1.72e-16!73;UBERON:0000073!8.43e-16!75;UBERON:0001016!8.43e-16!75;UBERON:0000955!2.60e-15!50;UBERON:0006238!2.60e-15!50;UBERON:0004121!7.05e-15!102;UBERON:0000924!7.05e-15!102;UBERON:0006601!7.05e-15!102;UBERON:0002616!1.12e-14!49;UBERON:0003056!1.82e-14!49;UBERON:0002020!4.10e-14!34;UBERON:0003080!8.18e-13!40;UBERON:0002780!2.47e-12!39;UBERON:0001890!2.47e-12!39;UBERON:0006240!2.47e-12!39;UBERON:0002791!2.53e-11!29;UBERON:0003528!2.53e-11!29;UBERON:0001893!2.53e-11!29;UBERON:0000025!2.92e-10!114;UBERON:0004111!3.21e-09!122;UBERON:0000956!1.75e-08!21;UBERON:0001869!1.75e-08!21;UBERON:0000203!1.75e-08!21;UBERON:0002021!2.57e-08!10;UBERON:0000411!2.57e-08!10;UBERON:0001950!2.57e-08!10;UBERON:0002619!1.98e-07!17;UBERON:0000153!2.00e-07!94;UBERON:0000468!2.51e-07!333;UBERON:0007811!4.88e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.31e-25,92;UBERON:0000073,3.66e-20,54;UBERON:0002346,1.93e-19,64;UBERON:0003075,1.93e-19,64;UBERON:0007284,1.93e-19,64;UBERON:0001049,3.93e-19,52;UBERON:0005068,3.93e-19,52;UBERON:0006241,3.93e-19,52;UBERON:0007135,3.93e-19,52;UBERON:0001017,3.03e-17,73;UBERON:0002020,4.83e-17,34;UBERON:0010371,3.09e-16,73;UBERON:0001016,3.62e-16,75;UBERON:0000955,4.60e-16,47;UBERON:0006238,4.60e-16,47;UBERON:0003056,6.18e-16,49;UBERON:0002616,2.49e-15,46;UBERON:0004121,6.46e-15,95;UBERON:0000924,6.46e-15,95;UBERON:0006601,6.46e-15,95;UBERON:0003080,1.71e-14,40;UBERON:0002780,6.29e-14,39;UBERON:0001890,6.29e-14,39;UBERON:0006240,6.29e-14,39;UBERON:0003528,1.04e-13,29;UBERON:0002791,1.04e-13,29;UBERON:0001893,1.04e-13,29;UBERON:0000025,1.54e-12,114;UBERON:0004111,1.99e-11,122;UBERON:0000956,2.42e-10,21;UBERON:0001869,2.42e-10,21;UBERON:0000203,2.42e-10,21;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0002619,4.13e-09,17;UBERON:0007100,3.18e-08,18;UBERON:0000948,3.18e-08,18;UBERON:0005498,3.18e-08,18;UBERON:0004140,3.18e-08,18;UBERON:0009881,3.18e-08,18;UBERON:0004141,3.18e-08,18;UBERON:0003084,3.18e-08,18;UBERON:0007005,3.18e-08,18;UBERON:0004139,3.18e-08,18;UBERON:0004291,3.18e-08,18 | |||
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|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.734187008646726,0,0.218025156380447,0,0,0.839918529752175,0,0,0,0,0,0,1.03134418455488,3.84401275633236,5.28990979272033,2.53532561402472,0.677689064138264,0.889294796111139,0,0,0,0,0,2.48855069540346,2.56511282830212,1.47227472945967,5.14171771926846,4.19650227808066,3.42974237801871,1.43768206527355,3.67687514644008,2.20231761998777,5.36286819957788,4.76180253094355,4.08847491963601,4.20843160571084,2.6045668527838,4.74611098302348,1.68828783009504,3.20876320331301,7.07108605136802,5.69486723196412,6.15118171223492,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0.983110940922263,0.511290967734173,0,0.70667914902068,1.12674735821344,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.445326417194474,1.73485326766136,0.913396434936424,0.922461989024234,0.60289056221049,0.823120949949934,0.502666365318702,0,0.86759614151947,0,4.04417124868523,1.32504911076236,0.484875253135222,0,3.22058876712702,3.77004072264219,0.510914110417183,0,0,0,4.49371918214468,4.57500602818627,3.01570445070875,10.7771078519211,10.7400492078739,3.74018480207208,7.62533936418461,1.73126918545538,0.497627882440372,0,0.841767423545896,1.82168620147785,1.83921683546778,1.98068342785884,2.86339153887859,2.99360596265843,2.8185018462667,3.27956035959051,1.29351685369508,1.07783996466421,2.83659120251729,0.879755620819744,1.53437012699302,1.94633074457919,2.089512999133,1.02891068203972,0.995171334092466,0,0,0,5.79952163099405,5.8631514995274,5.04173772090842,5.44512891845984,6.29645541591692,5.55361606394562,6.27841650826101,5.90201483079162,4.67061369468678,5.9241545968853,3.77585167381919,5.83695428730161,4.9707995724613,2.85415149878366,3.08674763148855,7.78072809687271,3.39585220851639,0,0,1.70630600428187,2.09013004674395,1.28867461322093,0.403367049246685,0.444756087689741,0.951128130562796,0,0.164698954724011,0.502670417600539,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0,0.379335801906163,1.25673363870702,0,1.01825663922657,0.581857461502877,1.1221731182451,0.379419222745544,0,0.31399745568275,0.246794327843601,0,0.500535317148282,0.589676985339609,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.739012760666419,2.08440552947533,1.79261474086228,1.52770577197669,1.17345124144251,2.68010011906905,1.90434912708811,0.390267295715598,1.41871629695572,0.664394068946325,1.75400245523236,1.14704320301017,0.518054945597687,0,0,0,0,0,6.10092241953609,5.62616095642575,0.163934945376675,4.79694761688309,1.57754109708128,0.780877488593277,0.646270193198397,0.955875191810208,0.222798674082394,0.566153061577665,2.83367491172426,1.75353514746787,0.395287777946524,8.67567554338879,1.27746076687442,1.42452482933804,0.977321756121456,2.14461159864296,0,0.971122544619926,0,0,0,1.84461088766356,0.516856586336442,0,0.712994756769443,0,0,0,2.04263763452273,1.62054984628179,0.776152102696527,0.643011105094777,2.48276327099183,1.24858172321449,1.81003922662333,1.522324745573,0.469343416127421,0,0,0.65954501176592,1.93757312035087,0.663442174209714,0.596861720015682,0.820704498725306,0.291480836629851,3.70850604021019,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,1.89801596148681,1.42323626988794,1.62008011232702,0.627264888043406,1.09181281873089,1.21377911746339,0.826534557253359,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.66183396182839,1.55560950675238,1.29159823477731,1.35164900392623,0.704143431874524,0.5208175393758,1.04859344425711,0.241584120826006,0,0,0.608175645870493,0.513554785824136,0.649604114888975,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0,0,2.26730383615211,0,0.0897138566094757,0.167884616364078,0.579568782096571,0.375364950902364,1.64836461840539,0.214368379079066,0,7.90652579663893,11.0478056761722,12.6037012956667,13.2326950404639,9.59115527678899,9.82012066606611,12.8254275044043,6.75481804836331,11.3285602246051,9.83744592328458,1.14166082342594,1.59609949360412,1.87806966329548,2.91728060481953,1.25767897576789,1.65459157605013,2.22246727801615,3.09052585858341,2.56735367673452,4.29585259998456,1.2673964994512,3.2066478035633,3.46473577638565,2.68905640100451,3.33125719942557,4.28664322154766,3.1288768005111,1.73618298417335,1.64834360321323,3.67997300335993,1.71434626192708,3.72699192934609,1.66905332963125,2.47088908274958,2.4468438907986,3.04612588410035,2.92684756596436,2.10455769150274,3.53090695999241,2.80571135828869,3.2031454893527,3.64466584789585,1.22769312950907,2.78886314134739,2.3148793317737,5.74564329257276,2.33931608445408,2.57845264857958,3.82576664137687,2.20591419119516,1.39120701372253 | ||
|short_description=p4@Usp13 | |||
}} | }} |
Latest revision as of 22:51, 1 October 2015
Short description: | p4@Usp13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Usp13_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | 0bp_to_ENSMUST00000072312, ENSMUST00000108228_5end |
EntrezGene: | Usp13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.48e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.48e-11 | 23 |
neuron | 1.60e-07 | 33 |
neuronal stem cell | 1.60e-07 | 33 |
neuroblast | 1.60e-07 | 33 |
electrically signaling cell | 1.60e-07 | 33 |