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FFCP PHASE1:Mm9::chr3:89518938..89519006,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:89518938..89519006,+
|DHSsupport=NA
|short_description=p1@Adar
|DPIdataset=NA
|description=CAGE_peak_1_at_Adar_5end
|association_with_transcript=0bp_to_ENSMUST00000098924,NM_001038587,uc008pzv.2_5end
|EntrezGene=56417
|EntrezGene=56417
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q99MU3,Q3UH31
|UniProt=Q99MU3,Q3UH31
|association_with_transcript=0bp_to_ENSMUST00000098924,NM_001038587,uc008pzv.2_5end
|cluster_id=chr3:89518938..89519006,+
|description=CAGE_peak_1_at_Adar_5end
|id=chr3:89518938..89519006,+
|ontology_enrichment_celltype=CL:0000393!6.52e-16!39;CL:0000211!6.52e-16!39;CL:0000221!1.00e-15!44;CL:0000133!1.00e-15!44;CL:0000055!1.38e-15!50;CL:0002319!1.62e-15!43;CL:0000540!7.47e-15!33;CL:0000047!7.47e-15!33;CL:0000031!7.47e-15!33;CL:0000404!7.47e-15!33;CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0002321!6.48e-07!70;CL:0000220!6.48e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000393,6.51e-16,39;CL:0000211,6.51e-16,39;CL:0000221,1.00e-15,44;CL:0000133,1.00e-15,44;CL:0002319,1.61e-15,43;CL:0000540,7.45e-15,33;CL:0000047,7.45e-15,33;CL:0000031,7.45e-15,33;CL:0000404,7.45e-15,33;CL:0000117,3.73e-13,23;CL:0000337,3.73e-13,23;CL:0002321,5.78e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.58e-34!75;UBERON:0001016!3.58e-34!75;UBERON:0001017!7.86e-34!73;UBERON:0005743!7.86e-34!73;UBERON:0004121!1.88e-29!102;UBERON:0000924!1.88e-29!102;UBERON:0006601!1.88e-29!102;UBERON:0002346!1.02e-27!71;UBERON:0003075!1.02e-27!71;UBERON:0007284!1.02e-27!71;UBERON:0000033!1.13e-26!63;UBERON:0001049!2.62e-26!52;UBERON:0005068!2.62e-26!52;UBERON:0006241!2.62e-26!52;UBERON:0007135!2.62e-26!52;UBERON:0000955!7.28e-26!50;UBERON:0006238!7.28e-26!50;UBERON:0002616!4.03e-25!49;UBERON:0003056!3.89e-23!49;UBERON:0003080!9.63e-21!40;UBERON:0000153!1.61e-20!94;UBERON:0002780!5.37e-20!39;UBERON:0001890!5.37e-20!39;UBERON:0006240!5.37e-20!39;UBERON:0007811!8.71e-20!86;UBERON:0002020!2.11e-19!34;UBERON:0002791!7.27e-17!29;UBERON:0003528!7.27e-17!29;UBERON:0001893!7.27e-17!29;UBERON:0000956!3.18e-12!21;UBERON:0001869!3.18e-12!21;UBERON:0000203!3.18e-12!21;UBERON:0002619!2.96e-10!17;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.57e-34,75;UBERON:0001017,7.82e-34,73;UBERON:0004121,5.96e-31,95;UBERON:0000924,5.96e-31,95;UBERON:0006601,5.96e-31,95;UBERON:0002346,4.03e-30,64;UBERON:0003075,4.03e-30,64;UBERON:0007284,4.03e-30,64;UBERON:0000073,6.27e-28,54;UBERON:0010371,1.46e-26,73;UBERON:0001049,2.61e-26,52;UBERON:0005068,2.61e-26,52;UBERON:0006241,2.61e-26,52;UBERON:0007135,2.61e-26,52;UBERON:0000955,1.16e-23,47;UBERON:0006238,1.16e-23,47;UBERON:0010314,1.55e-23,92;UBERON:0003056,3.88e-23,49;UBERON:0002616,6.19e-23,46;UBERON:0003080,9.60e-21,40;UBERON:0002780,5.35e-20,39;UBERON:0001890,5.35e-20,39;UBERON:0006240,5.35e-20,39;UBERON:0002020,2.11e-19,34;UBERON:0003528,7.25e-17,29;UBERON:0002791,7.25e-17,29;UBERON:0001893,7.25e-17,29;UBERON:0000956,3.18e-12,21;UBERON:0001869,3.18e-12,21;UBERON:0000203,3.18e-12,21;UBERON:0002619,2.95e-10,17;UBERON:0002021,1.22e-07,10;UBERON:0000411,1.22e-07,10;UBERON:0001950,1.22e-07,10
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1.86401793926078,6.76431526421028,8.67195967055077,7.94200754194069,7.58359634541786,9.04118764344118,5.4065960157049,10.4447942394721,11.4579858662676,17.3017918302423,10.8712854371703,5.47257011889944,7.58426689507628,7.29810775044591,7.49789987303239,6.10627867995637,9.48841487037652,7.15252877212554,7.69250876927801,7.08909730437971,8.88504759543699,8.91619637863498,6.35204966362095,5.26272555994663,4.61816839873581,7.01261413089414,5.21479882314986,5.77163478772568,3.6782681209885,4.19711540910196,8.30715254338419,5.2551093126331,8.79127796482872,6.85978813053011,3.51100472824754,64.9464619009626,66.2868340570335,63.591401991773,67.0227411140382,86.3203974911009,79.3163592259185,87.7529250301348,80.1571741739112,69.3307885745833,84.9126911272985,10.586309453586,18.7541690498485,16.561159758151,14.3432963070293,11.319110781911,10.6629234901008,9.33436256766784,10.9198580336614,10.5903339165299,10.6132828940795,11.4065684950608,12.260712190095,8.42773567228942,10.0519489275645,9.87890066036548,12.859929664643,10.0819363572024,10.4170979050401,9.06588981767275,8.68473628792944,10.9718160763333,9.22874192028555,11.921809497366,9.59286349773368,8.09340671571843,8.2922315733843,13.1708140468396,5.5244639401947,10.4569167661314,8.41713407486608,10.4398815949273,9.45643030805409,9.00308294973317,8.6764631064141,11.7673032698496,21.9833308585392,7.71974307869848,9.45432637812513,8.99055160723564,5.95596831622692,4.40548887678801
|phase1_expression=11.3705681444404,0.697950815278722,0,0,0,4.02910252588535,3.73780224952841,4.9066862907799,8.16574588479667,7.49006484230379,22.0871179010901,20.5014448618015,3.93761678841773,2.97229368224591,7.66152452176024,5.66930748691513,2.09868563438444,3.78554598429885,5.62169177783529,5.09267582157636,17.8590909317247,3.97163804803541,2.61199789138935,2.71987118748791,1.60586496747019,1.14846392823004,0.86152399231815,1.50829862880122,1.52018735565099,2.77233142735924,4.21287970245079,21.5910428976275,17.221814052368,0,5.48818077527422,3.82339684324532,6.94175811292055,1.67412652294763,2.3440060335714,1.0470474879476,0.588231488031014,0,0.971020706062307,15.6112054289716,16.2203089951223,11.5634453861859,7.04152209913235,13.2995345392072,12.7417985985994,17.1098311185369,11.7588594165305,10.062679505548,1.34226084846189,4.35217285206807,3.36093799142464,10.5476368774738,10.601737277734,12.8918023069361,45.5212036934095,50.2541430308431,46.9035238594573,7.11573517345177,5.33576877666684,4.49949858640699,7.9109309005358,6.3943210345149,12.2836045312546,8.83702102239575,34.2175720617976,36.9916271028832,35.1242685456808,44.8472045513972,39.5354688303388,33.3174973864675,34.2168331535104,26.6573448116906,96.9019752794621,67.1635398328087,82.4867083586027,46.951518431949,48.9458893272892,41.152156273984,71.1916647453521,68.0942758138333,71.3567817117703,43.6050306501028,42.1420175165345,36.9070902734095,14.2365243466386,9.8998743739889,6.37701875143691,0,4.0798280022465,0,0,0,4.63466586434781,5.45377032249785,5.45550609666024,6.71345191569646,12.3942209403479,3.84979432242953,10.1922095882658,21.3320010945999,8.01016851741492,7.85415582972806,4.54972000513305,4.68153906848146,3.36619248741323,10.984718290797,7.45986905094384,9.43842982767638,6.91846491768175,6.63179618431539,8.46638691377075,7.03732911446183,1.73036477414062,3.03658649531814,0.884610551949874,5.01477234836968,2.87093973998512,4.363877278217,3.72783522436244,52.1149818680554,65.5568192326114,3.0654846625031,8.98613433794402,8.39863823390771,7.62421362438388,91.222499397537,74.1150976566175,48.3769255634528,69.5297280769106,57.7916933566547,81.6607015119071,70.4127081714068,7.63795228877372,6.71797641294502,12.6361379216837,11.3638602178696,12.751803410345,13.7941262660084,10.803727788321,13.4127287873786,15.988577300562,14.2206229516183,16.3041000733928,23.8007101079894,15.7364634840975,18.5323958564463,16.1875034230833,10.5213951565236,15.5706459566335,10.0993128291428,6.58502836505419,7.76233640592123,6.31991868581911,9.77922047035918,7.95657798307659,9.73491130916859,7.97388603935727,9.54328925743379,10.8902578369197,8.46086196513836,7.25055430570678,12.7893669612724,9.65784245038629,8.4071046504362,7.5697530960201,4.92502392237286,3.72916523910936,3.94739966048397,6.58650345873152,4.02619256281115,60.7737951350328,31.9004298375782,0.660837565967596,4.7601101999438,12.797295032114,11.6118335930219,9.92279452180119,6.45387278794696,5.55945109612176,3.80451252225118,2.37264530772256,5.10566759644434,5.02670417600539,4.37704238490532,3.31438948102504,6.29173586057955,3.6743468478698,3.58454291857861,10.4317345524195,10.0538691096561,7.88954149711563,9.9789150644204,8.72786192254316,9.46833568519301,6.45012678667424,4.57591458736767,2.35498091762062,3.94870924549762,0.592905254174298,5.5058884886311,4.32429789249047,4.04751802292737,3.65148218499305,3.13530307678142,1.01850340712568,2.5892652370573,3.89124544260085,3.29473695825698,5.75072826109418,2.97712758134803,2.80833905803104,1.01031551178845,1.79397413521912,1.4473305640901,7.02062122633098,13.2643988239339,10.9186534216157,8.65699937453459,7.74477819352057,6.19773152534718,4.76087281772027,3.90267295715598,5.2019597555043,5.75808193086815,4.30527875375215,3.60499292374624,6.56202931090403,3.32692834737477,3.01582567878545,5.98296252200581,3.93411418415229,3.58717770196152,74.816574934311,65.169697745265,8.6885521049638,0.504941854408746,13.8823616543153,16.7888660047555,15.5104846367615,9.55875191810208,10.4715376818725,13.8707500086528,12.5491317519217,13.151513606009,16.2067988958075,80.9729717382954,8.51640511249612,9.08134578703002,11.4020871547503,8.90838664051691,7.96470830039777,8.98288353773431,4.53485335447127,4.90373207365335,4.42952839321159,7.07100840271033,5.68542244970086,5.81653967164009,7.84294232446387,3.47640433729398,8.4334886859999,6.18813259489121,30.2991249120871,13.6846431463796,12.2890749593617,11.574199891706,13.4778577568128,13.9127677729615,11.6829804627506,13.0919928119278,3.05073220482823,2.1183207086382,4.19003956304428,6.5954501176592,7.42736362801165,8.2025577902292,8.8335534562321,8.042904087508,3.20628920292836,55.4421653011424,3.75915937755276,8.46186158649212,6.66700298530962,5.46268525313604,5.33107488111998,6.17701067657611,10.7086410896129,7.97723278244851,10.2267980615274,16.2294005062569,17.0821436533813,11.3858901591035,10.6925287413583,8.57262013659322,9.17122767733946,9.17077555416781,10.0010681427656,11.2555055053133,5.57344385154709,1.86401793926078,6.76431526421028,8.67195967055077,7.94200754194069,7.58359634541786,9.04118764344118,5.4065960157049,10.4447942394721,11.4579858662676,17.3017918302423,10.8712854371703,5.47257011889944,7.58426689507628,7.29810775044591,7.49789987303239,6.10627867995637,9.48841487037652,7.15252877212554,7.69250876927801,7.08909730437971,8.88504759543699,8.91619637863498,6.35204966362095,5.26272555994663,4.61816839873581,7.01261413089414,5.21479882314986,5.77163478772568,3.6782681209885,4.19711540910196,8.30715254338419,5.2551093126331,8.79127796482872,6.85978813053011,3.51100472824754,64.9464619009626,66.2868340570335,63.591401991773,67.0227411140382,86.3203974911009,79.3163592259185,87.7529250301348,80.1571741739112,69.3307885745833,84.9126911272985,10.586309453586,18.7541690498485,16.561159758151,14.3432963070293,11.319110781911,10.6629234901008,9.33436256766784,10.9198580336614,10.5903339165299,10.6132828940795,11.4065684950608,12.260712190095,8.42773567228942,10.0519489275645,9.87890066036548,12.859929664643,10.0819363572024,10.4170979050401,9.06588981767275,8.68473628792944,10.9718160763333,9.22874192028555,11.921809497366,9.59286349773368,8.09340671571843,8.2922315733843,13.1708140468396,5.5244639401947,10.4569167661314,8.41713407486608,10.4398815949273,9.45643030805409,9.00308294973317,8.6764631064141,11.7673032698496,21.9833308585392,7.71974307869848,9.45432637812513,8.99055160723564,5.95596831622692,4.40548887678801
|short_description=p1@Adar
}}
}}

Latest revision as of 20:46, 25 September 2015

Short description:p1@Adar
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Adar_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000098924, NM_001038587, uc008pzv.2_5end
EntrezGene:Adar
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Adar

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.62
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C345.52
Mouse Granule cells, donor2.CNhs12357.11731-123E350.25
Mouse Granule cells, donor3.CNhs12108.11636-122C746.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F536.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F144.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D396.90
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F367.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D782.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F448.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E471.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E568.09
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I671.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F642.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.91
Mouse Schwann, donor1.CNhs12507.11728-123D914.24
Mouse Schwann, donor2.CNhs12573.11746-123F99.90
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B252.11
cerebellum, neonate N30.CNhs11135.1395-42I265.56
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.62
corpora quadrigemina, adult.CNhs10501.16-22A491.22
corpus striatum, adult.CNhs10487.19-21D874.12
corpus striatum, neonate N00.CNhs11226.630-43F148.38
cortex, adult.CNhs10473.12-14D569.53
cortex, neonate N30.CNhs11107.1392-42F257.79
diencephalon, adult.CNhs10482.20-12F281.66
diencephalon, neonate N30.CNhs11201.1388-42B270.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B212.64
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C612.75
eyeball, embryo E14.CNhs10521.399-16E213.79
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D413.41
eyeball, neonate N00.CNhs11207.633-15C615.99
eyeball, neonate N01.CNhs11140.1532-43E714.22
eyeball, neonate N02.CNhs11205.1551-44G816.30
eyeball, neonate N16.CNhs11188.777-19A223.80
forelimb, embryo E11.CNhs10596.335-25E215.74
forelimb, embryo E12.CNhs10600.359-14H218.53
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E99.73
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D410.89
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E512.79
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E38.41
heart, neonate N03.CNhs11221.1349-25I27.57
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E860.77
hippocampus, neonate N00.CNhs11228.627-43G131.90
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I512.80
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F810.05
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I29.98
kidney, embryo E18.CNhs11001.1288-20C78.73
kidney, neonate N00.CNhs11214.646-21G79.47
kidney, neonate N10.CNhs11206.758-6D56.45
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B17.02
lung, embryo E12.CNhs10522.354-16G213.26
lung, embryo E14.CNhs10604.404-26F810.92
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A66.20
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C274.82
medulla oblongata, neonate N30.CNhs11200.1396-42A365.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.21
olfactory brain, adult.CNhs10489.18-22I980.97
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H79.08
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G68.91
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G830.30
pituitary gland, embryo E12.CNhs11018.346-16E613.68
pituitary gland, embryo E13.CNhs11009.370-44C712.29
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B913.48
pituitary gland, embryo E16.CNhs11036.449-43F613.91
pituitary gland, embryo E17.CNhs11039.1265-44F511.68
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C36.60
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H38.20
skin, neonate N06.CNhs11097.693-20I58.83
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C955.44
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.23
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E317.08
stomach, embryo E15.CNhs10603.1252-16G811.39
stomach, embryo E16.CNhs11022.459-17D410.69
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A910.00
stomach, neonate N25.CNhs11104.1355-25E411.26
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I59.04
testis, embryo E18.CNhs11027.503-18G55.41
testis, neonate N00.CNhs11189.1300-22B710.44
testis, neonate N07.CNhs11222.726-26I411.46
testis, neonate N10.CNhs11204.763-44D917.30
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C56.11
thymus, embryo E17.CNhs10581.478-18C19.49
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C48.89
thymus, neonate N07.CNhs11211.713-19D38.92
thymus, neonate N10.CNhs11194.748-24E46.35
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E48.31
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A164.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A266.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A363.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D767.02
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A486.32
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A579.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A687.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A780.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A869.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A984.91
whole body, embryo E11.CNhs11014.324-5I810.59
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H216.56
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B111.32
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F911.77
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell6.51e-1639
electrically active cell6.51e-1639
ectodermal cell1.00e-1544
neurectodermal cell1.00e-1544
neural cell1.61e-1543
neuron7.45e-1533
neuronal stem cell7.45e-1533
neuroblast7.45e-1533
electrically signaling cell7.45e-1533
CNS neuron (sensu Vertebrata)3.73e-1323
neuroblast (sensu Vertebrata)3.73e-1323
embryonic cell5.78e-0770

Uber anatomy
Ontology termp-valuen
nervous system3.57e-3475
central nervous system7.82e-3473
ectoderm-derived structure5.96e-3195
ectoderm5.96e-3195
presumptive ectoderm5.96e-3195
neurectoderm4.03e-3064
neural plate4.03e-3064
presumptive neural plate4.03e-3064
regional part of nervous system6.27e-2854
ecto-epithelium1.46e-2673
neural tube2.61e-2652
neural rod2.61e-2652
future spinal cord2.61e-2652
neural keel2.61e-2652
brain1.16e-2347
future brain1.16e-2347
structure with developmental contribution from neural crest1.55e-2392
pre-chordal neural plate3.88e-2349
regional part of brain6.19e-2346
anterior neural tube9.60e-2140
regional part of forebrain5.35e-2039
forebrain5.35e-2039
future forebrain5.35e-2039
gray matter2.11e-1934
brain grey matter7.25e-1729
regional part of telencephalon7.25e-1729
telencephalon7.25e-1729
cerebral cortex3.18e-1221
cerebral hemisphere3.18e-1221
pallium3.18e-1221
regional part of cerebral cortex2.95e-1017
occipital lobe1.22e-0710
visual cortex1.22e-0710
neocortex1.22e-0710
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