FFCP PHASE1:Mm9::chr6:117124311..117124330,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:117124311..117124330,- to FFCP PHASE1:Mm9::chr6:117124311..117124330,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:117124311..117124330,- | |||
|description=CAGE_peak_at_chr6:117124311..117124330,- | |||
|id=chr6:117124311..117124330,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.08e-21,3;CL:0000359,2.08e-21,3;CL:0002539,2.08e-21,3;CL:0000514,2.08e-21,3;CL:0000680,2.00e-18,6;CL:0000187,2.00e-18,6;CL:0000056,2.00e-18,6;CL:0000222,7.62e-16,7;CL:0000355,2.16e-12,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.08e-21,3;UBERON:0004237,2.08e-21,3;UBERON:0004695,2.08e-21,3;UBERON:0002111,2.08e-21,3;UBERON:0004178,2.08e-21,3;UBERON:0000947,3.17e-16,4;UBERON:0001637,3.17e-16,4;UBERON:0004573,3.17e-16,4;UBERON:0003509,3.17e-16,4;UBERON:0004571,3.17e-16,4;UBERON:0010191,3.17e-16,4;UBERON:0004572,3.17e-16,4;UBERON:0000055,4.18e-13,5;UBERON:0007500,4.18e-13,5;UBERON:0001981,4.18e-13,5;UBERON:0002049,4.18e-13,5;UBERON:0007798,4.18e-13,5;UBERON:0004537,4.18e-13,5;UBERON:0006965,4.18e-13,5;UBERON:0001134,2.16e-12,9;UBERON:0002036,2.16e-12,9;UBERON:0002385,2.16e-12,9;UBERON:0000486,2.16e-12,9;UBERON:0007503,2.16e-12,9;UBERON:0001015,2.16e-12,9;UBERON:0002329,2.16e-12,9;UBERON:0003082,2.16e-12,9;UBERON:0003059,2.16e-12,9;UBERON:0007282,2.16e-12,9;UBERON:0004290,2.16e-12,9;UBERON:0009618,2.16e-12,9;UBERON:0000383,3.51e-11,10;UBERON:0007524,3.45e-10,11;UBERON:0003077,3.45e-10,11;UBERON:0007285,3.45e-10,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.12891555560981,7.15832333430558,1.56478268869608,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0.889294796111139,0.449949858640699,0,1.4209602298922,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.421333260395256,33.4043432252993,45.9821228147078,33.5672595784823,0,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0.696710015581316,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0,0.126473074248515,0,0.156998727841375,0.370191491765402,0.889357881261447,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0.518054945597687,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0,0,0,0.604647113929502,0,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.388902376688095,2.0665571756437,1.520605129417,0.58678619322877,0.5208175393758,0,0,0,0,0,0.308132871494482,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0.441182838239031,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.12891555560981,7.15832333430558,1.56478268869608,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0.889294796111139,0.449949858640699,0,1.4209602298922,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.421333260395256,33.4043432252993,45.9821228147078,33.5672595784823,0,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0.696710015581316,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0,0.126473074248515,0,0.156998727841375,0.370191491765402,0.889357881261447,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0.518054945597687,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0,0,0,0.604647113929502,0,0,0.307435147943927,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.388902376688095,2.0665571756437,1.520605129417,0.58678619322877,0.5208175393758,0,0,0,0,0,0.308132871494482,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr6:117124311..117124330,- | |||
}} | }} |
Latest revision as of 23:40, 4 August 2015
Short description: | p@chr6:117124311..117124330, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117124311..117124330, - |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.08e-21 | 3 |
vascular associated smooth muscle cell | 2.08e-21 | 3 |
aortic smooth muscle cell | 2.08e-21 | 3 |
smooth muscle myoblast | 2.08e-21 | 3 |
muscle precursor cell | 2.00e-18 | 6 |
muscle cell | 2.00e-18 | 6 |
myoblast | 2.00e-18 | 6 |
mesodermal cell | 7.62e-16 | 7 |
multi-potent skeletal muscle stem cell | 2.16e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.08e-21 | 3 |
blood vessel smooth muscle | 2.08e-21 | 3 |
arterial system smooth muscle | 2.08e-21 | 3 |
artery smooth muscle tissue | 2.08e-21 | 3 |
aorta smooth muscle tissue | 2.08e-21 | 3 |
aorta | 3.17e-16 | 4 |
artery | 3.17e-16 | 4 |
systemic artery | 3.17e-16 | 4 |
arterial blood vessel | 3.17e-16 | 4 |
systemic arterial system | 3.17e-16 | 4 |
aortic system | 3.17e-16 | 4 |
arterial system | 3.17e-16 | 4 |
vessel | 4.18e-13 | 5 |
epithelial tube open at both ends | 4.18e-13 | 5 |
blood vessel | 4.18e-13 | 5 |
vasculature | 4.18e-13 | 5 |
vascular system | 4.18e-13 | 5 |
blood vasculature | 4.18e-13 | 5 |
vascular cord | 4.18e-13 | 5 |
skeletal muscle tissue | 2.16e-12 | 9 |
striated muscle tissue | 2.16e-12 | 9 |
muscle tissue | 2.16e-12 | 9 |
multilaminar epithelium | 2.16e-12 | 9 |
epithelial vesicle | 2.16e-12 | 9 |
musculature | 2.16e-12 | 9 |
somite | 2.16e-12 | 9 |
myotome | 2.16e-12 | 9 |
presomitic mesoderm | 2.16e-12 | 9 |
presumptive segmental plate | 2.16e-12 | 9 |
dermomyotome | 2.16e-12 | 9 |
trunk paraxial mesoderm | 2.16e-12 | 9 |
musculature of body | 3.51e-11 | 10 |
dense mesenchyme tissue | 3.45e-10 | 11 |
paraxial mesoderm | 3.45e-10 | 11 |
presumptive paraxial mesoderm | 3.45e-10 | 11 |