FFCP PHASE1:Mm9::chr7:38554684..38554696,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:38554684..38554696,- to FFCP PHASE1:Mm9::chr7:38554684..38554696,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=243937 | |EntrezGene=243937 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K083 | |UniProt=Q8K083 | ||
|association_with_transcript=74bp_to_ENSMUST00000056338,NM_172385,uc009gkl.1,uc012fip.1_5end | |||
|cluster_id=chr7:38554684..38554696,- | |||
|description=CAGE_peak_10_at_Zfp536_5end | |||
|id=chr7:38554684..38554696,- | |||
|ontology_enrichment_celltype=CL:0000221!4.84e-28!44;CL:0000133!4.84e-28!44;CL:0002319!2.64e-27!43;CL:0000540!2.17e-25!33;CL:0000047!2.17e-25!33;CL:0000031!2.17e-25!33;CL:0000404!2.17e-25!33;CL:0000055!6.46e-21!50;CL:0000393!3.97e-19!39;CL:0000211!3.97e-19!39;CL:0000117!4.72e-16!23;CL:0000337!4.72e-16!23;CL:0002321!4.01e-11!70;CL:0000220!4.01e-11!70;CL:0000107!1.28e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.11e-51,43;CL:0000221,7.73e-50,44;CL:0000133,7.73e-50,44;CL:0000540,5.19e-49,33;CL:0000047,5.19e-49,33;CL:0000031,5.19e-49,33;CL:0000404,5.19e-49,33;CL:0000393,9.42e-41,39;CL:0000211,9.42e-41,39;CL:0002321,1.82e-29,70;CL:0000107,7.43e-29,9;CL:0000117,7.65e-22,23;CL:0000337,7.65e-22,23;CL:0000723,2.60e-16,91;CL:0000048,2.60e-16,91;CL:0000034,5.40e-15,97;CL:0002610,4.32e-09,3;CL:0000120,1.01e-08,3;CL:0000217,4.17e-07,2;CL:0000328,4.17e-07,2;CL:0002573,4.17e-07,2;CL:0002376,4.17e-07,2;CL:0000218,4.17e-07,2;CL:0000692,4.17e-07,2;CL:0002377,4.17e-07,2;CL:0002375,4.17e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.37e-33!75;UBERON:0001016!1.37e-33!75;UBERON:0004121!2.50e-32!102;UBERON:0000924!2.50e-32!102;UBERON:0006601!2.50e-32!102;UBERON:0001017!1.01e-31!73;UBERON:0005743!1.01e-31!73;UBERON:0000033!3.02e-17!63;UBERON:0002346!3.32e-17!71;UBERON:0003075!3.32e-17!71;UBERON:0007284!3.32e-17!71;UBERON:0001049!4.52e-15!52;UBERON:0005068!4.52e-15!52;UBERON:0006241!4.52e-15!52;UBERON:0007135!4.52e-15!52;UBERON:0000955!5.47e-15!50;UBERON:0006238!5.47e-15!50;UBERON:0002616!1.24e-14!49;UBERON:0003056!4.10e-13!49;UBERON:0003080!5.07e-12!40;UBERON:0002780!1.07e-11!39;UBERON:0001890!1.07e-11!39;UBERON:0006240!1.07e-11!39;UBERON:0000010!2.94e-11!11;UBERON:0002020!5.62e-10!34;UBERON:0002410!1.28e-09!9;UBERON:0007811!3.75e-08!86;UBERON:0002791!4.61e-08!29;UBERON:0003528!4.61e-08!29;UBERON:0001893!4.61e-08!29;UBERON:0000153!1.27e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.94e-34,11;UBERON:0002410,7.43e-29,9;UBERON:0001016,3.66e-27,75;UBERON:0001017,1.42e-23,73;UBERON:0004121,4.40e-22,95;UBERON:0000924,4.40e-22,95;UBERON:0006601,4.40e-22,95;UBERON:0000011,6.16e-11,3;UBERON:0010313,1.28e-10,3;UBERON:0002342,1.28e-10,3;UBERON:0002005,1.28e-10,3;UBERON:0005428,1.28e-10,3;UBERON:0005062,1.28e-10,3;UBERON:0000013,1.70e-10,3;UBERON:0004684,4.32e-09,3;UBERON:0002275,4.32e-09,3;UBERON:0011216,3.08e-07,194 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,2.39680088414724,0.768436610643109,0.622137673850866,1.21505344498522,2.10324961351382,0,0.883474163806454,0.734944795289724,2.30029130443767,0.919218786610021,1.10115880999389,1.78762273319263,1.22885226604995,0.659431438650969,0.731901148819277,2.6045668527838,0.837548997004143,2.25105044012672,1.22238598221448,0.883885756421003,1.42371680799103,2.05039390407831,2.65041676666144,1.73814588245607,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.347648640384553,0.255715457330331,0.62336413367868,0.324482526135515,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0,0,1.20563854268572,0.612328492361951,0.768682321709099,0.562210347358373,0,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0,0,0.439100230582101,0,0.210289948564127,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.581857461502877,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848725428875941,0.234690248288502,0.502518772325447,0,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,0.160550589987792,0.937693492737625,0,0,3.47059041357882,2.73307121007647,3.66219776145758,3.58453196928828,7.12955757063661,5.09537755419898,3.23848561339915,3.21481443702443,3.16230222357219,0.321321316421807,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.358117032009409,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.247960367176008,0,0.388844919875379,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0.824171801606613,0,0,0,0.476872379894642,0,0,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.419959264876088,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,2.39680088414724,0.768436610643109,0.622137673850866,1.21505344498522,2.10324961351382,0,0.883474163806454,0.734944795289724,2.30029130443767,0.919218786610021,1.10115880999389,1.78762273319263,1.22885226604995,0.659431438650969,0.731901148819277,2.6045668527838,0.837548997004143,2.25105044012672,1.22238598221448,0.883885756421003,1.42371680799103,2.05039390407831,2.65041676666144,1.73814588245607,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.347648640384553,0.255715457330331,0.62336413367868,0.324482526135515,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0,0,1.20563854268572,0.612328492361951,0.768682321709099,0.562210347358373,0,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0,0,0.439100230582101,0,0.210289948564127,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.581857461502877,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848725428875941,0.234690248288502,0.502518772325447,0,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,0.160550589987792,0.937693492737625,0,0,3.47059041357882,2.73307121007647,3.66219776145758,3.58453196928828,7.12955757063661,5.09537755419898,3.23848561339915,3.21481443702443,3.16230222357219,0.321321316421807,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.358117032009409,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.247960367176008,0,0.388844919875379,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0.824171801606613,0,0,0,0.476872379894642,0,0,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | ||
|short_description=p10@Zfp536 | |||
}} | }} |
Latest revision as of 17:10, 26 September 2015
Short description: | p10@Zfp536 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Zfp536_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 74bp_to_ENSMUST00000056338, NM_172385, uc009gkl.1, uc012fip.1_5end |
EntrezGene: | Zfp536 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.11e-51 | 43 |
ectodermal cell | 7.73e-50 | 44 |
neurectodermal cell | 7.73e-50 | 44 |
neuron | 5.19e-49 | 33 |
neuronal stem cell | 5.19e-49 | 33 |
neuroblast | 5.19e-49 | 33 |
electrically signaling cell | 5.19e-49 | 33 |
electrically responsive cell | 9.42e-41 | 39 |
electrically active cell | 9.42e-41 | 39 |
embryonic cell | 1.82e-29 | 70 |
autonomic neuron | 7.43e-29 | 9 |
CNS neuron (sensu Vertebrata) | 7.65e-22 | 23 |
neuroblast (sensu Vertebrata) | 7.65e-22 | 23 |
somatic stem cell | 2.60e-16 | 91 |
multi fate stem cell | 2.60e-16 | 91 |
stem cell | 5.40e-15 | 97 |
raphe nuclei neuron | 4.32e-09 | 3 |
granule cell | 1.01e-08 | 3 |
insulating cell | 4.17e-07 | 2 |
myelin accumulating cell | 4.17e-07 | 2 |
Schwann cell | 4.17e-07 | 2 |
non-myelinating Schwann cell | 4.17e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 4.17e-07 | 2 |
terminal Schwann cell | 4.17e-07 | 2 |
immature Schwann cell | 4.17e-07 | 2 |
Schwann cell precursor | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.94e-34 | 11 |
autonomic nervous system | 7.43e-29 | 9 |
nervous system | 3.66e-27 | 75 |
central nervous system | 1.42e-23 | 73 |
ectoderm-derived structure | 4.40e-22 | 95 |
ectoderm | 4.40e-22 | 95 |
presumptive ectoderm | 4.40e-22 | 95 |
parasympathetic nervous system | 6.16e-11 | 3 |
neural crest-derived structure | 1.28e-10 | 3 |
neural crest | 1.28e-10 | 3 |
enteric nervous system | 1.28e-10 | 3 |
vagal neural crest | 1.28e-10 | 3 |
neural fold | 1.28e-10 | 3 |
sympathetic nervous system | 1.70e-10 | 3 |
raphe nuclei | 4.32e-09 | 3 |
reticular formation | 4.32e-09 | 3 |
organ system subdivision | 3.08e-07 | 194 |