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FFCP PHASE1:Mm9::chr8:86423995..86424009,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:86423995..86424009,+
|DHSsupport=NA
|short_description=p2@Lphn1
|DPIdataset=NA
|description=CAGE_peak_2_at_Lphn1_5end
|association_with_transcript=0bp_to_ENSMUST00000141158,NM_181039,uc009mlg.2,uc009mlh.2_5end
|EntrezGene=330814
|EntrezGene=330814
|HGNC=
|HGNC=
|MCL_coexpression_id=1841
|TSSclassifier=NA
|UniProt=Q80TR1
|UniProt=Q80TR1
|association_with_transcript=0bp_to_ENSMUST00000141158,NM_181039,uc009mlg.2,uc009mlh.2_5end
|cluster_id=chr8:86423995..86424009,+
|description=CAGE_peak_2_at_Lphn1_5end
|id=chr8:86423995..86424009,+
|ontology_enrichment_celltype=CL:0000117!2.86e-12!23;CL:0000337!2.86e-12!23;CL:0000540!1.10e-11!33;CL:0000047!1.10e-11!33;CL:0000031!1.10e-11!33;CL:0000404!1.10e-11!33;CL:0000221!4.22e-11!44;CL:0000133!4.22e-11!44;CL:0002319!6.50e-11!43;CL:0000393!5.56e-08!39;CL:0000211!5.56e-08!39;CL:0000055!2.24e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-12,23;CL:0000337,2.43e-12,23;CL:0000540,9.43e-12,33;CL:0000047,9.43e-12,33;CL:0000031,9.43e-12,33;CL:0000404,9.43e-12,33;CL:0000221,3.65e-11,44;CL:0000133,3.65e-11,44;CL:0002319,5.64e-11,43;CL:0000393,5.33e-08,39;CL:0000211,5.33e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.31e-27!73;UBERON:0005743!3.31e-27!73;UBERON:0000073!7.16e-26!75;UBERON:0001016!7.16e-26!75;UBERON:0004121!4.99e-24!102;UBERON:0000924!4.99e-24!102;UBERON:0006601!4.99e-24!102;UBERON:0002346!3.42e-23!71;UBERON:0003075!3.42e-23!71;UBERON:0007284!3.42e-23!71;UBERON:0001049!2.95e-22!52;UBERON:0005068!2.95e-22!52;UBERON:0006241!2.95e-22!52;UBERON:0007135!2.95e-22!52;UBERON:0000955!5.83e-21!50;UBERON:0006238!5.83e-21!50;UBERON:0000033!2.10e-20!63;UBERON:0002616!2.15e-20!49;UBERON:0002020!6.28e-18!34;UBERON:0007811!6.35e-17!86;UBERON:0000153!6.54e-17!94;UBERON:0003080!8.56e-17!40;UBERON:0003056!1.93e-16!49;UBERON:0002780!2.73e-16!39;UBERON:0001890!2.73e-16!39;UBERON:0006240!2.73e-16!39;UBERON:0002791!1.12e-14!29;UBERON:0003528!1.12e-14!29;UBERON:0001893!1.12e-14!29;UBERON:0000956!9.91e-11!21;UBERON:0001869!9.91e-11!21;UBERON:0000203!9.91e-11!21;UBERON:0002619!1.30e-08!17;UBERON:0000025!2.76e-07!114;UBERON:0002021!3.94e-07!10;UBERON:0000411!3.94e-07!10;UBERON:0001950!3.94e-07!10;UBERON:0004111!4.70e-07!122;UBERON:0000468!8.74e-07!333;UBERON:0000475!9.71e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.24e-27,73;UBERON:0001016,4.95e-26,75;UBERON:0000073,5.96e-24,54;UBERON:0004121,5.57e-23,95;UBERON:0000924,5.57e-23,95;UBERON:0006601,5.57e-23,95;UBERON:0002346,1.34e-22,64;UBERON:0003075,1.34e-22,64;UBERON:0007284,1.34e-22,64;UBERON:0001049,2.16e-22,52;UBERON:0005068,2.16e-22,52;UBERON:0006241,2.16e-22,52;UBERON:0007135,2.16e-22,52;UBERON:0010371,3.48e-21,73;UBERON:0010314,4.02e-19,92;UBERON:0000955,4.39e-19,47;UBERON:0006238,4.39e-19,47;UBERON:0002616,1.58e-18,46;UBERON:0002020,4.89e-18,34;UBERON:0003080,6.79e-17,40;UBERON:0003056,1.54e-16,49;UBERON:0002780,2.18e-16,39;UBERON:0001890,2.18e-16,39;UBERON:0006240,2.18e-16,39;UBERON:0003528,9.14e-15,29;UBERON:0002791,9.14e-15,29;UBERON:0001893,9.14e-15,29;UBERON:0000956,8.62e-11,21;UBERON:0001869,8.62e-11,21;UBERON:0000203,8.62e-11,21;UBERON:0002619,1.17e-08,17;UBERON:0002021,3.62e-07,10;UBERON:0000411,3.62e-07,10;UBERON:0001950,3.62e-07,10;UBERON:0000025,6.09e-07,114
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|phase1_expression=7.8472935081349,0,0,0,0,0.33575854382378,0,1.67860320474049,1.97104211012333,0.70219357896598,1.54096171402954,2.23362045186942,3.93761678841773,4.10875891369288,0.666219523631325,0.202475267389826,1.39912375625629,0.630924330716475,0.274228867211478,1.27316895539409,6.4632900514813,1.68794617041505,1.56719873483361,0,0,0,0,0,0.190023419456374,0.252030129759931,0,1.90509202037889,3.07532393792285,0,0.288851619751275,0.831173226792462,0.408338712524738,0,0,0,0,0,0,1.00717454380462,1.52065396829272,0.367093504323363,6.25913075478431,1.74420125104357,4.61340983742391,3.30530828426282,2.2397827460058,4.31257693094915,0.838913030288682,1.45072428402269,2.35265659399725,1.28629718017973,2.57880095944881,1.03134418455488,9.91350658212029,8.99284664762456,8.87363964908651,3.38844532069132,3.55717918444456,0.449949858640699,0,0.7104801149461,6.89080254192331,6.53171119046643,12.1316846400919,6.48028503992115,9.04397333810943,11.9973413449598,12.1477697523387,5.63457676388789,3.83381884072945,6.43453150627015,17.6185409599022,11.4918604276669,10.9060638611933,10.4190167306853,5.39777097254217,10.4182674111352,10.3297709630511,5.6276261003168,7.18151764551008,18.2669722993674,14.5219114415085,9.69277118291563,1.28734528666413,1.96486056277642,3.76823835312181,0.860423876981386,0,0,0,0.448026887097336,2.10666630197628,1.02258193546835,0.519572009205738,1.06001872353102,4.64783285263046,1.28326477414318,0,0,1.08245520505607,1.26679932737549,0,1.59857431606684,0.258937883647172,5.49235914539852,3.64319186208885,3.04465478312141,4.61230994512117,2.26083960828934,7.2904998424137,5.52933001850572,0.494389935468748,1.15679485535929,0.884610551949874,4.69123864847487,1.76673214768315,2.42437626567611,0,9.07620470735796,19.2690970268379,0.255457055208591,0.479260498023681,0,0.762421362438388,8.98743836428936,13.2675174817402,16.2094114225595,13.9059456153821,20.9686675010871,7.06479351502504,11.356888414743,6.31404055871961,2.61254638281195,2.27450482590307,2.94618598241064,2.99277018814219,2.5289231487682,3.24111833649629,2.26057226753573,6.53150391852747,4.86832137082429,5.99691037182265,5.95017752699736,3.01795190105979,4.16033376369202,5.27853372491847,4.82230611340665,5.56094498451196,3.48252166522167,2.05782136407943,3.98068533636986,0,0,0,3.31401236056803,1.87620847984877,1.44049649168812,5.20838418287463,1.18058539048442,3.5481435964097,2.79040733700489,2.68273401399619,3.97002164048376,3.94943639792353,2.62667942526552,3.4859588104718,1.90059983652932,3.07370161407471,2.41571553768669,11.7762371195911,13.7892180588241,0.660837565967596,1.58670339998127,2.77274725695804,3.48355007790658,2.96395161040815,1.61346819698674,2.2237804384487,1.71203063501303,1.89811624617805,1.31759163779209,1.50801125280162,1.59165177632921,2.14460495831032,2.69645822596266,0.432276099749388,0.597423819763102,3.22435431620239,2.39921876480431,3.38123207019241,2.64746726198909,2.90928730751439,5.33032231166421,5.94423448968019,1.77132177575523,2.82597710114475,1.85095745882701,0.592905254174298,1.50160595144485,0.786235980452812,1.57403478669398,0.811440485554012,0.964708639009667,1.52775511068852,1.43848068725405,1.62135226775035,0.549122826376163,5.75072826109418,1.48856379067401,0.624075346229121,0,0.538192240565737,0.964887042726734,2.21703828199926,3.03186258832776,3.42226450528254,3.22515662972857,3.75504397261603,2.84760637651087,3.80869825417622,5.65887578787617,7.56648691709717,4.20782910332672,9.24837658213425,4.58817281204066,3.7990696010497,3.47157740595628,0,0,0,0.551873492609465,4.97706828962155,6.91548950893999,2.78689407140348,3.28212205365685,4.73262329124385,3.90438744296638,4.73931475012158,2.38968797952552,2.89638276307112,3.39691836946599,3.23848561339915,4.67609372658099,3.55759000151871,9.63963949265421,4.25820255624806,4.62970569534864,9.28455668315384,5.1140738121486,1.32745138339963,2.42780636154981,1.209294227859,1.69744571780308,0.590603785761546,2.76691633149535,1.80899805217755,6.18007340111759,3.92147116223193,3.47640433729398,0,1.03135543248187,2.7235168460303,3.42116078659489,4.39819524861365,3.42939256050548,6.91626911204867,4.8159580752559,5.59466670047211,6.69822888052118,1.40803024838226,1.0591603543191,1.7642271844397,2.4732937941222,4.84393280087717,5.12659861889325,2.86493625607528,3.44695889464629,1.7488850197791,7.41701208042039,1.02522528478712,2.68302928352189,2.03713980106683,1.50694765603753,1.23024804948923,1.60144721244566,1.5298058699447,2.09927178485487,0.829199842826543,0,4.27053591334533,3.04979200690273,4.10420295122845,2.92723614420256,1.74690050996942,4.31565908431426,4.46328660916814,1.04702376793612,2.98114438571124,1.86401793926078,0.56369293868419,6.42921147989109,3.47462829959905,7.38914515707381,4.90807329215378,6.08242051766801,10.4447942394721,12.7600297147071,9.01790362061113,4.59009829569411,4.03242008761012,5.05617793005085,4.66267995167378,1.84879722896689,3.11809975146708,3.22248052201467,2.98022032171897,4.44723163223885,4.13530676088816,3.63479219813331,4.57240839929999,4.33552596088414,3.80085734885034,5.09922760693746,4.32444538071805,2.26730383615211,1.99787358036658,3.05027112472217,1.84673078000486,2.70465431645067,2.43987218086537,3.6630324853453,1.2862102744744,3.51100472824754,10.7302850097243,11.0478056761722,10.8850147553485,17.0134650520251,7.53590771747707,10.5755145634558,10.8003600037089,13.0593148935024,11.3285602246051,11.39072685854,2.28332164685189,5.1873233542134,4.78054096111576,3.40349403895612,5.03071590307158,3.12533964365024,1.77797382241292,2.88449080134452,4.1719497246936,3.79045817645696,4.30914809813408,4.14977951049368,3.183811253976,3.9695594491019,4.65227298540468,0.952587382566147,3.01299247456624,5.40145817298374,2.88460130562315,1.76638704161277,2.74295401908332,3.37204031702741,2.14592570952589,3.48831399917588,3.19971893412124,3.72304274723377,4.024415403201,4.99832451731901,5.16055632614275,3.92799590160417,5.57584585183618,4.23569274214923,3.27384834535751,3.71848418846318,3.47231899766054,5.9954538705107,2.8071793013449,3.43793686477277,5.54736162999646,3.75005412503176,3.94175320554716
|short_description=p2@Lphn1
}}
}}

Latest revision as of 20:53, 25 September 2015

Short description:p2@Lphn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lphn1_5end
Coexpression cluster:MCL_coexpression_mm9:1841
Association with transcript: 0bp_to_ENSMUST00000141158, NM_181039, uc009mlg.2, uc009mlh.2_5end
EntrezGene:Lphn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lphn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C17.29
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F116.21
cortex, adult.CNhs10473.12-14D513.91
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B211.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C66.53
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E811.78
hippocampus, neonate N00.CNhs11228.627-43G113.79
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D82.96
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G75.33
kidney, neonate N10.CNhs11206.758-6D55.94
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I49.28
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H35.13
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G57.39
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B710.44
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D99.02
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D34.57
thymus, neonate N10.CNhs11194.748-24E44.34
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.43e-1223
neuroblast (sensu Vertebrata)2.43e-1223
neuron9.43e-1233
neuronal stem cell9.43e-1233
neuroblast9.43e-1233
electrically signaling cell9.43e-1233
ectodermal cell3.65e-1144
neurectodermal cell3.65e-1144
neural cell5.64e-1143
electrically responsive cell5.33e-0839
electrically active cell5.33e-0839

Uber anatomy
Ontology termp-valuen
central nervous system2.24e-2773
nervous system4.95e-2675
regional part of nervous system5.96e-2454
ectoderm-derived structure5.57e-2395
ectoderm5.57e-2395
presumptive ectoderm5.57e-2395
neurectoderm1.34e-2264
neural plate1.34e-2264
presumptive neural plate1.34e-2264
neural tube2.16e-2252
neural rod2.16e-2252
future spinal cord2.16e-2252
neural keel2.16e-2252
ecto-epithelium3.48e-2173
structure with developmental contribution from neural crest4.02e-1992
brain4.39e-1947
future brain4.39e-1947
regional part of brain1.58e-1846
gray matter4.89e-1834
anterior neural tube6.79e-1740
pre-chordal neural plate1.54e-1649
regional part of forebrain2.18e-1639
forebrain2.18e-1639
future forebrain2.18e-1639
brain grey matter9.14e-1529
regional part of telencephalon9.14e-1529
telencephalon9.14e-1529
cerebral cortex8.62e-1121
cerebral hemisphere8.62e-1121
pallium8.62e-1121
regional part of cerebral cortex1.17e-0817
occipital lobe3.62e-0710
visual cortex3.62e-0710
neocortex3.62e-0710
tube6.09e-07114
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