FFCP PHASE1:Mm9::chr9:91273186..91273211,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:91273186..91273211,+ to FFCP PHASE1:Mm9::chr9:91273186..91273211,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22774 | |EntrezGene=22774 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_uc009rak.1,uc009ral.1_5end | |||
|cluster_id=chr9:91273186..91273211,+ | |||
|description=CAGE_peak_9_at_Zic4_5end | |||
|id=chr9:91273186..91273211,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-14!23;CL:0000337!1.24e-14!23;CL:0002319!8.45e-14!43;CL:0000221!2.34e-13!44;CL:0000133!2.34e-13!44;CL:0000055!4.38e-11!50;CL:0000540!4.93e-09!33;CL:0000047!4.93e-09!33;CL:0000031!4.93e-09!33;CL:0000404!4.93e-09!33;CL:0002453!5.49e-08!8;CL:0002613!3.26e-07!3;CL:0000393!4.36e-07!39;CL:0000211!4.36e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.27e-44,3;CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0002319,6.89e-09,43;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0000708,1.29e-08,2;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.02e-23!73;UBERON:0005743!2.02e-23!73;UBERON:0000073!1.52e-22!75;UBERON:0001016!1.52e-22!75;UBERON:0001049!3.42e-18!52;UBERON:0005068!3.42e-18!52;UBERON:0006241!3.42e-18!52;UBERON:0007135!3.42e-18!52;UBERON:0004121!2.32e-17!102;UBERON:0000924!2.32e-17!102;UBERON:0006601!2.32e-17!102;UBERON:0002346!9.26e-15!71;UBERON:0003075!9.26e-15!71;UBERON:0007284!9.26e-15!71;UBERON:0000955!3.08e-14!50;UBERON:0006238!3.08e-14!50;UBERON:0000033!2.68e-13!63;UBERON:0002616!3.54e-13!49;UBERON:0003076!4.12e-13!12;UBERON:0003057!4.12e-13!12;UBERON:0003056!3.50e-09!49;UBERON:0001948!5.03e-09!5;UBERON:0002315!5.03e-09!5;UBERON:0003080!1.21e-08!40;UBERON:0007811!5.93e-08!86;UBERON:0002780!6.92e-08!39;UBERON:0001890!6.92e-08!39;UBERON:0006240!6.92e-08!39;UBERON:0001894!1.85e-07!10;UBERON:0006222!1.85e-07!10;UBERON:0002240!1.94e-07!6;UBERON:0005174!1.94e-07!6;UBERON:0001137!1.94e-07!6;UBERON:0002020!2.35e-07!34;UBERON:0004733!3.45e-07!6;UBERON:0004732!3.45e-07!6;UBERON:0002028!3.45e-07!6;UBERON:0007277!3.45e-07!6;UBERON:0000153!9.73e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.27e-27,5;UBERON:0002435,6.27e-27,5;UBERON:0000204,6.27e-27,5;UBERON:0010082,6.27e-27,5;UBERON:0002420,3.62e-17,8;UBERON:0007245,3.62e-17,8;UBERON:0010009,3.62e-17,8;UBERON:0010011,3.62e-17,8;UBERON:0000454,3.62e-17,8;UBERON:0003210,1.29e-08,2;UBERON:0002020,2.18e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,2.76961204233407,4.29991924931325,1.04182674111352,0,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0,0,0,0,0.62336413367868,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.830298780673413,0,0.512200817262403,0,0.419226325255965,0,0.44449345560323,0.412070114477788,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,2.76961204233407,4.29991924931325,1.04182674111352,0,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0,0,0,0,0.62336413367868,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.830298780673413,0,0.512200817262403,0,0.419226325255965,0,0.44449345560323,0.412070114477788,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p9@Zic4 | |||
}} | }} |
Latest revision as of 06:13, 27 September 2015
Short description: | p9@Zic4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Zic4_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 149bp_to_uc009rak.1, uc009ral.1_5end |
EntrezGene: | Zic4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.27e-44 | 3 |
CNS neuron (sensu Vertebrata) | 1.11e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-10 | 23 |
neural cell | 6.89e-09 | 43 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
leptomeningeal cell | 1.29e-08 | 2 |
neuron | 1.34e-07 | 33 |
neuronal stem cell | 1.34e-07 | 33 |
neuroblast | 1.34e-07 | 33 |
electrically signaling cell | 1.34e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 6.27e-27 | 5 |
striatum | 6.27e-27 | 5 |
ventral part of telencephalon | 6.27e-27 | 5 |
future corpus striatum | 6.27e-27 | 5 |
basal ganglion | 3.62e-17 | 8 |
nuclear complex of neuraxis | 3.62e-17 | 8 |
aggregate regional part of brain | 3.62e-17 | 8 |
collection of basal ganglia | 3.62e-17 | 8 |
cerebral subcortex | 3.62e-17 | 8 |
blood-cerebrospinal fluid barrier | 1.29e-08 | 2 |
gray matter | 2.18e-07 | 34 |