FFCP PHASE1:Mm9::chrX:70737389..70737402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:70737389..70737402,- | |||
|description=CAGE_peak_at_chrX:70737389..70737402,- | |||
|id=chrX:70737389..70737402,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.27e-13,6;CL:0000187,6.27e-13,6;CL:0000056,6.27e-13,6;CL:0000222,5.83e-11,7;CL:0000355,2.45e-08,9;CL:0002494,1.20e-07,3;CL:0000737,1.20e-07,3;CL:0000746,1.20e-07,3;CL:0000513,1.20e-07,3;CL:0000192,6.79e-07,3;CL:0000359,6.79e-07,3;CL:0002539,6.79e-07,3;CL:0000514,6.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.12e-08!193;UBERON:0004120!3.12e-08!193;UBERON:0006603!3.12e-08!193;UBERON:0004535!5.06e-07!23;UBERON:0001009!5.06e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.94e-10,14;UBERON:0000117,4.94e-10,14;UBERON:0000171,4.94e-10,14;UBERON:0000170,4.94e-10,14;UBERON:0005597,4.94e-10,14;UBERON:0000118,4.94e-10,14;UBERON:0001134,2.45e-08,9;UBERON:0002036,2.45e-08,9;UBERON:0002385,2.45e-08,9;UBERON:0000486,2.45e-08,9;UBERON:0007503,2.45e-08,9;UBERON:0001015,2.45e-08,9;UBERON:0002329,2.45e-08,9;UBERON:0003082,2.45e-08,9;UBERON:0003059,2.45e-08,9;UBERON:0007282,2.45e-08,9;UBERON:0004290,2.45e-08,9;UBERON:0009618,2.45e-08,9;UBERON:0005153,5.78e-08,17;UBERON:0005178,5.78e-08,17;UBERON:0005181,5.78e-08,17;UBERON:0002224,5.78e-08,17;UBERON:0000915,5.78e-08,17;UBERON:0008947,5.78e-08,17;UBERON:0003258,5.78e-08,17;UBERON:0000383,2.03e-07,10;UBERON:0004535,3.58e-07,23;UBERON:0001009,3.58e-07,23;UBERON:0001135,6.79e-07,3;UBERON:0004237,6.79e-07,3;UBERON:0004695,6.79e-07,3;UBERON:0002111,6.79e-07,3;UBERON:0004178,6.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.12891555560981,1.10128051297009,3.12956537739216,0.218025156380447,0,0,0.55994568650145,0,0,0,0,3.08711323243136,3.15186783932632,2.57836046138721,0,0,0.633831403506179,1.0165335962074,0,0,0,0.7104801149461,1.49800055259202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,2.55645483867087,6.49465011507172,4.94675404314476,0,0,0,0,0,0,0,0,0,0.890652834388949,0.173485326766136,0.304465478312141,0.461230994512117,1.50722640552623,0.117588707135705,0.251333182659351,1.73036477414062,0.433798070759735,0,0.970601099684455,1.10420759230197,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0.125654352112864,0,0,0,0,1.83310854930569,0.870848794270651,0,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.544291993210623,1.2811372028485,0.655912071918102,0.517406741478031,0,0,0,0.876782929710299,0.834141747676794,0.696504333044333,3.49829631893504,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0.771335564436891,0.697601834251224,1.60964040839772,0.116765342367169,0.493679549740441,1.64167464079095,0.324275238183423,1.60819986167866,1.09775057645525,0.402619256281115,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0.570676878337677,0,0.823494773620054,0,0.795825888164603,0.19496408711912,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,0.342745537829186,1.1270773567308,0,0.775809948670503,0.561086559122548,0.442655759869801,0.295220295959204,0.941992367048249,0.616985819609003,0,0.166845105716094,0,0.449724224769707,0.202860121388503,0,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,1.29327233116623,0,0.162964976442026,1.18821560042632,1.40814148973101,0.502518772325447,1.6663054862021,1.56106918286239,0.315270288212382,3.10050565508285,1.75400245523236,0.983179888294428,1.72684981865896,1.73578870297814,0,0,0,0.275936746304732,0,0,2.95082901678016,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.977321756121456,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,0,0,0.388076051348264,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.23467170806371,0,0,0,0.484393280087717,0.301564624640779,2.02932984805332,1.31312719796049,0,0,0,0,0.925972636848558,0.753473828018764,0.410082683163076,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.836353184057875,0.436725127492355,0.674321731924103,0.826534557253359,0.26175594198403,0,0.621339313086926,0,0.299033092087958,0.330916980914195,0.388902376688095,1.54991788173277,2.53434188236167,0.821500670520278,1.3020438484395,0.419437377702843,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0,0,2.31827512838629,1.50145980360946,0.36630324853453,0.214368379079066,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0,0.618105171716683,0,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0,0,0.0941093804153306,0,0.365855945745545,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.578719832943424,2.74791635731741,1.87145286756327,1.28922632428979,0.57386499620653,3.52946270591225,0.463735671240843 | 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| ||
|short_description=p@chrX:70737389..70737402,- | |||
}} | }} |
Latest revision as of 09:54, 6 August 2015
Short description: | p@chrX:70737389..70737402, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:70737389..70737402, - |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.27e-13 | 6 |
muscle cell | 6.27e-13 | 6 |
myoblast | 6.27e-13 | 6 |
mesodermal cell | 5.83e-11 | 7 |
multi-potent skeletal muscle stem cell | 2.45e-08 | 9 |
cardiocyte | 1.20e-07 | 3 |
striated muscle cell | 1.20e-07 | 3 |
cardiac muscle cell | 1.20e-07 | 3 |
cardiac muscle myoblast | 1.20e-07 | 3 |
smooth muscle cell | 6.79e-07 | 3 |
vascular associated smooth muscle cell | 6.79e-07 | 3 |
aortic smooth muscle cell | 6.79e-07 | 3 |
smooth muscle myoblast | 6.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 4.94e-10 | 14 |
respiratory tube | 4.94e-10 | 14 |
respiration organ | 4.94e-10 | 14 |
pair of lungs | 4.94e-10 | 14 |
lung primordium | 4.94e-10 | 14 |
lung bud | 4.94e-10 | 14 |
skeletal muscle tissue | 2.45e-08 | 9 |
striated muscle tissue | 2.45e-08 | 9 |
muscle tissue | 2.45e-08 | 9 |
multilaminar epithelium | 2.45e-08 | 9 |
epithelial vesicle | 2.45e-08 | 9 |
musculature | 2.45e-08 | 9 |
somite | 2.45e-08 | 9 |
myotome | 2.45e-08 | 9 |
presomitic mesoderm | 2.45e-08 | 9 |
presumptive segmental plate | 2.45e-08 | 9 |
dermomyotome | 2.45e-08 | 9 |
trunk paraxial mesoderm | 2.45e-08 | 9 |
epithelial bud | 5.78e-08 | 17 |
thoracic cavity element | 5.78e-08 | 17 |
thoracic segment organ | 5.78e-08 | 17 |
thoracic cavity | 5.78e-08 | 17 |
thoracic segment of trunk | 5.78e-08 | 17 |
respiratory primordium | 5.78e-08 | 17 |
endoderm of foregut | 5.78e-08 | 17 |
musculature of body | 2.03e-07 | 10 |
cardiovascular system | 3.58e-07 | 23 |
circulatory system | 3.58e-07 | 23 |
smooth muscle tissue | 6.79e-07 | 3 |
blood vessel smooth muscle | 6.79e-07 | 3 |
arterial system smooth muscle | 6.79e-07 | 3 |
artery smooth muscle tissue | 6.79e-07 | 3 |
aorta smooth muscle tissue | 6.79e-07 | 3 |