FFCP PHASE1:Mm9::chrX:98463557..98463568,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:98463557..98463568,- to FFCP PHASE1:Mm9::chrX:98463557..98463568,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16186 | |EntrezGene=16186 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1285 | |||
|TSSclassifier=NA | |||
|UniProt=P34902,Q3UPA9 | |UniProt=P34902,Q3UPA9 | ||
|association_with_transcript=-12bp_to_NM_013563,uc009txc.1,uc009txd.1_5end | |||
|cluster_id=chrX:98463557..98463568,- | |||
|description=CAGE_peak_2_at_Il2rg_5end | |||
|id=chrX:98463557..98463568,- | |||
|ontology_enrichment_celltype=CL:0000988!7.20e-11!32;CL:0002032!7.20e-11!32;CL:0000037!7.20e-11!32;CL:0000566!7.20e-11!32;CL:0000837!7.20e-11!32;CL:0000738!3.55e-09!17;CL:0002087!3.55e-09!17;CL:0002031!4.61e-09!25;CL:0000838!1.07e-08!12;CL:0000542!1.18e-08!13;CL:0000051!1.18e-08!13;CL:0000084!4.80e-08!11;CL:0000827!4.80e-08!11;CL:0000791!5.05e-07!9;CL:0000789!5.05e-07!9;CL:0002420!5.05e-07!9;CL:0002419!5.05e-07!9;CL:0000790!5.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.60e-11,32;CL:0002032,1.60e-11,32;CL:0000037,1.60e-11,32;CL:0000837,1.60e-11,32;CL:0000738,1.09e-09,17;CL:0002087,1.09e-09,17;CL:0002031,1.35e-09,25;CL:0000838,3.55e-09,12;CL:0000542,3.92e-09,13;CL:0000051,3.92e-09,13;CL:0000084,1.76e-08,11;CL:0000827,1.76e-08,11;CL:0002320,2.14e-07,46;CL:0000134,2.14e-07,46;CL:0000791,2.16e-07,9;CL:0000789,2.16e-07,9;CL:0002420,2.16e-07,9;CL:0002419,2.16e-07,9;CL:0000790,2.16e-07,9;CL:0000624,6.70e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.95e-19!48;UBERON:0003081!1.73e-18!88;UBERON:0002390!2.42e-17!45;UBERON:0003061!2.42e-17!45;UBERON:0000926!5.49e-15!193;UBERON:0004120!5.49e-15!193;UBERON:0006603!5.49e-15!193;UBERON:0002405!1.70e-14!70;UBERON:0004177!2.15e-11!29;UBERON:0001004!6.56e-10!42;UBERON:0000065!8.86e-10!41;UBERON:0003104!3.22e-09!131;UBERON:0009142!3.22e-09!131;UBERON:0003408!4.73e-09!24;UBERON:0002370!5.71e-09!23;UBERON:0000974!5.71e-09!23;UBERON:0004807!5.71e-09!23;UBERON:0005058!5.71e-09!23;UBERON:0003351!5.71e-09!23;UBERON:0009113!5.71e-09!23;UBERON:0003295!5.71e-09!23;UBERON:0009722!5.71e-09!23;UBERON:0005562!5.71e-09!23;UBERON:0007690!5.71e-09!23;UBERON:0000077!5.74e-09!97;UBERON:0001041!1.02e-08!92;UBERON:0006562!1.78e-08!24;UBERON:0001557!1.78e-08!24;UBERON:0001042!1.78e-08!24;UBERON:0008814!1.78e-08!24;UBERON:0009145!1.78e-08!24;UBERON:0005057!9.17e-08!51;UBERON:0002371!8.28e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.52e-21,48;UBERON:0002405,9.52e-21,48;UBERON:0002390,3.31e-19,45;UBERON:0003061,3.31e-19,45;UBERON:0003081,1.79e-18,87;UBERON:0004177,7.81e-13,29;UBERON:0005057,7.81e-13,29;UBERON:0000077,4.92e-12,35;UBERON:0000926,7.46e-11,120;UBERON:0004120,7.46e-11,120;UBERON:0006603,7.46e-11,120;UBERON:0001004,2.47e-10,42;UBERON:0003408,2.64e-10,24;UBERON:0002370,3.15e-10,23;UBERON:0000974,3.15e-10,23;UBERON:0004807,3.15e-10,23;UBERON:0005058,3.15e-10,23;UBERON:0003351,3.15e-10,23;UBERON:0009113,3.15e-10,23;UBERON:0003295,3.15e-10,23;UBERON:0009722,3.15e-10,23;UBERON:0005562,3.15e-10,23;UBERON:0007690,3.15e-10,23;UBERON:0000065,3.42e-10,41;UBERON:0006562,2.65e-09,24;UBERON:0001557,2.65e-09,24;UBERON:0001042,2.65e-09,24;UBERON:0008814,2.65e-09,24;UBERON:0009145,2.65e-09,24;UBERON:0001041,4.53e-09,80;UBERON:0002384,2.14e-07,46;UBERON:0002371,3.66e-07,16;UBERON:0000072,4.98e-07,27 | |||
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| ||
|short_description=p2@Il2rg | |||
}} | }} |
Latest revision as of 00:58, 2 October 2015
Short description: | p2@Il2rg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Il2rg_5end |
Coexpression cluster: | MCL_coexpression_mm9:1285 |
Association with transcript: | -12bp_to_NM_013563, uc009txc.1, uc009txd.1_5end |
EntrezGene: | Il2rg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.60e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.60e-11 | 32 |
hematopoietic stem cell | 1.60e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.60e-11 | 32 |
leukocyte | 1.09e-09 | 17 |
nongranular leukocyte | 1.09e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 25 |
lymphoid lineage restricted progenitor cell | 3.55e-09 | 12 |
lymphocyte | 3.92e-09 | 13 |
common lymphoid progenitor | 3.92e-09 | 13 |
T cell | 1.76e-08 | 11 |
pro-T cell | 1.76e-08 | 11 |
connective tissue cell | 2.14e-07 | 46 |
mesenchymal cell | 2.14e-07 | 46 |
mature alpha-beta T cell | 2.16e-07 | 9 |
alpha-beta T cell | 2.16e-07 | 9 |
immature T cell | 2.16e-07 | 9 |
mature T cell | 2.16e-07 | 9 |
immature alpha-beta T cell | 2.16e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.70e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.52e-21 | 48 |
immune system | 9.52e-21 | 48 |
hematopoietic system | 3.31e-19 | 45 |
blood island | 3.31e-19 | 45 |
lateral plate mesoderm | 1.79e-18 | 87 |
hemopoietic organ | 7.81e-13 | 29 |
immune organ | 7.81e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 4.92e-12 | 35 |
mesoderm | 7.46e-11 | 120 |
mesoderm-derived structure | 7.46e-11 | 120 |
presumptive mesoderm | 7.46e-11 | 120 |
respiratory system | 2.47e-10 | 42 |
gland of gut | 2.64e-10 | 24 |
thymus | 3.15e-10 | 23 |
neck | 3.15e-10 | 23 |
respiratory system epithelium | 3.15e-10 | 23 |
hemolymphoid system gland | 3.15e-10 | 23 |
pharyngeal epithelium | 3.15e-10 | 23 |
thymic region | 3.15e-10 | 23 |
pharyngeal gland | 3.15e-10 | 23 |
entire pharyngeal arch endoderm | 3.15e-10 | 23 |
thymus primordium | 3.15e-10 | 23 |
early pharyngeal endoderm | 3.15e-10 | 23 |
respiratory tract | 3.42e-10 | 41 |
pharynx | 2.65e-09 | 24 |
upper respiratory tract | 2.65e-09 | 24 |
chordate pharynx | 2.65e-09 | 24 |
pharyngeal arch system | 2.65e-09 | 24 |
pharyngeal region of foregut | 2.65e-09 | 24 |
foregut | 4.53e-09 | 80 |
connective tissue | 2.14e-07 | 46 |
bone marrow | 3.66e-07 | 16 |
segment of respiratory tract | 4.98e-07 | 27 |