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FFCP PHASE1:Mm9::chr13:12199136..12199148,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20191
|EntrezGene=20191
|HGNC=
|HGNC=
|MCL_coexpression_id=405
|TSSclassifier=NA
|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6
|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6
|association_with_transcript=63bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end
|association_with_transcript=63bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end
|cluster_id=chr13:12199136..12199148,-
|description=CAGE_peak_4_at_Ryr2_5end
|description=CAGE_peak_4_at_Ryr2_5end
|id=chr13:12199136..12199148,-
|id=chr13:12199136..12199148,-
|ontology_enrichment_celltype=CL:0000117!9.08e-08!23;CL:0000337!9.08e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-08,23;CL:0000337,3.22e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.16e-13!34;UBERON:0002346!5.75e-13!71;UBERON:0003075!5.75e-13!71;UBERON:0007284!5.75e-13!71;UBERON:0001049!6.39e-13!52;UBERON:0005068!6.39e-13!52;UBERON:0006241!6.39e-13!52;UBERON:0007135!6.39e-13!52;UBERON:0001017!1.35e-12!73;UBERON:0005743!1.35e-12!73;UBERON:0000955!5.51e-12!50;UBERON:0006238!5.51e-12!50;UBERON:0007100!7.44e-12!18;UBERON:0000948!7.44e-12!18;UBERON:0005498!7.44e-12!18;UBERON:0004140!7.44e-12!18;UBERON:0009881!7.44e-12!18;UBERON:0004141!7.44e-12!18;UBERON:0003084!7.44e-12!18;UBERON:0007005!7.44e-12!18;UBERON:0004139!7.44e-12!18;UBERON:0004291!7.44e-12!18;UBERON:0000073!8.95e-12!75;UBERON:0001016!8.95e-12!75;UBERON:0002616!1.99e-11!49;UBERON:0000025!8.70e-11!114;UBERON:0000033!9.00e-11!63;UBERON:0002791!1.04e-10!29;UBERON:0003528!1.04e-10!29;UBERON:0001893!1.04e-10!29;UBERON:0004111!5.23e-10!122;UBERON:0004121!7.20e-10!102;UBERON:0000924!7.20e-10!102;UBERON:0006601!7.20e-10!102;UBERON:0002021!2.36e-09!10;UBERON:0000411!2.36e-09!10;UBERON:0001950!2.36e-09!10;UBERON:0003080!2.34e-08!40;UBERON:0003056!6.35e-08!49;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0004535!1.10e-07!23;UBERON:0001009!1.10e-07!23;UBERON:0002619!6.90e-07!17;UBERON:0000956!7.46e-07!21;UBERON:0001869!7.46e-07!21;UBERON:0000203!7.46e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.65e-30,92;UBERON:0000073,4.42e-26,54;UBERON:0001049,2.79e-23,52;UBERON:0005068,2.79e-23,52;UBERON:0006241,2.79e-23,52;UBERON:0007135,2.79e-23,52;UBERON:0000025,3.61e-22,114;UBERON:0002020,1.71e-21,34;UBERON:0001017,4.08e-20,73;UBERON:0004111,4.61e-20,122;UBERON:0002021,1.71e-19,10;UBERON:0000411,1.71e-19,10;UBERON:0001950,1.71e-19,10;UBERON:0001016,2.33e-19,75;UBERON:0007100,4.55e-19,18;UBERON:0000948,4.55e-19,18;UBERON:0005498,4.55e-19,18;UBERON:0004140,4.55e-19,18;UBERON:0009881,4.55e-19,18;UBERON:0004141,4.55e-19,18;UBERON:0003084,4.55e-19,18;UBERON:0007005,4.55e-19,18;UBERON:0004139,4.55e-19,18;UBERON:0004291,4.55e-19,18;UBERON:0002346,1.59e-17,64;UBERON:0003075,1.59e-17,64;UBERON:0007284,1.59e-17,64;UBERON:0000955,1.93e-17,47;UBERON:0006238,1.93e-17,47;UBERON:0002616,2.57e-16,46;UBERON:0003528,2.48e-15,29;UBERON:0002791,2.48e-15,29;UBERON:0001893,2.48e-15,29;UBERON:0010371,1.83e-14,73;UBERON:0004535,3.94e-14,23;UBERON:0001009,3.94e-14,23;UBERON:0004121,1.45e-13,95;UBERON:0000924,1.45e-13,95;UBERON:0006601,1.45e-13,95;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0003103,5.11e-13,43;UBERON:0002619,9.17e-13,17;UBERON:0003080,1.40e-12,40;UBERON:0000956,9.38e-12,21;UBERON:0001869,9.38e-12,21;UBERON:0000203,9.38e-12,21;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000483,4.44e-11,174;UBERON:0000119,7.70e-11,176;UBERON:0002240,9.38e-10,6;UBERON:0005174,9.38e-10,6;UBERON:0001137,9.38e-10,6;UBERON:0003056,2.10e-09,49;UBERON:0004872,8.63e-09,33;UBERON:0001948,2.75e-08,5;UBERON:0002315,2.75e-08,5
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,1.10434270475807,0.122490799214954,0.0958454710182364,0,7.70811166995721,2.042997409363,2.30409799884365,1.05509030184155,0.365950574409639,1.56274011167028,0.837548997004143,1.12552522006336,1.98637722109853,2.35702868378934,2.27794689278565,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,4.39171195517321,8.58731497935166,0,0,0,0,1.04853447583376,1.83000241127451,0.376963056338593,3.65031072403781,4.34716277461562,0.83115217823824,2.10913641988085,0,0,0,0,0,0,0,0.150704817835715,0.476255494059295,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,0,0,0,2.89976081549703,0.938104239924385,1.2604344302271,2.60419209143731,2.55793501271625,2.93107514486019,2.79040733700489,6.70683503499048,7.00592054203017,9.37991144506839,5.58169377868924,6.64764238276017,6.43279944671462,5.04965265169416,4.02619256281115,4.41608891984667,0.205809224758569,0,0,0,0,0.38660238396628,0.605050573870028,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.72936002979246,1.05490517932983,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,2.24924921495265,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.549454872801795,0,0,5.0827665835536,3.68260189205742,5.15605962095457,8.07709957015332,4.7955776383945,5.2877572817279,10.1253375034771,5.85417564191487,4.53142408984205,2.5888015587591,0.31136204275253,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0,0.394017929502254,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,1.10434270475807,0.122490799214954,0.0958454710182364,0,7.70811166995721,2.042997409363,2.30409799884365,1.05509030184155,0.365950574409639,1.56274011167028,0.837548997004143,1.12552522006336,1.98637722109853,2.35702868378934,2.27794689278565,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,4.39171195517321,8.58731497935166,0,0,0,0,1.04853447583376,1.83000241127451,0.376963056338593,3.65031072403781,4.34716277461562,0.83115217823824,2.10913641988085,0,0,0,0,0,0,0,0.150704817835715,0.476255494059295,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,0,0,0,2.89976081549703,0.938104239924385,1.2604344302271,2.60419209143731,2.55793501271625,2.93107514486019,2.79040733700489,6.70683503499048,7.00592054203017,9.37991144506839,5.58169377868924,6.64764238276017,6.43279944671462,5.04965265169416,4.02619256281115,4.41608891984667,0.205809224758569,0,0,0,0,0.38660238396628,0.605050573870028,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.72936002979246,1.05490517932983,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,2.24924921495265,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.549454872801795,0,0,5.0827665835536,3.68260189205742,5.15605962095457,8.07709957015332,4.7955776383945,5.2877572817279,10.1253375034771,5.85417564191487,4.53142408984205,2.5888015587591,0.31136204275253,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0,0.394017929502254,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0
|short_description=p4@Ryr2
|short_description=p4@Ryr2
}}
}}

Latest revision as of 04:16, 27 September 2015

Short description:p4@Ryr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ryr2_5end
Coexpression cluster:MCL_coexpression_mm9:405
Association with transcript: 63bp_to_ENSMUST00000021750, ENSMUST00000170156, NM_023868, uc007pld.1, uc007plf.1, uc011ywc.1_5end
EntrezGene:Ryr2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ryr2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E37.01
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G16.65
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.22e-0823
neuroblast (sensu Vertebrata)3.22e-0823

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest7.65e-3092
regional part of nervous system4.42e-2654
neural tube2.79e-2352
neural rod2.79e-2352
future spinal cord2.79e-2352
neural keel2.79e-2352
tube3.61e-22114
gray matter1.71e-2134
central nervous system4.08e-2073
anatomical conduit4.61e-20122
occipital lobe1.71e-1910
visual cortex1.71e-1910
neocortex1.71e-1910
nervous system2.33e-1975
primary circulatory organ4.55e-1918
heart4.55e-1918
primitive heart tube4.55e-1918
primary heart field4.55e-1918
anterior lateral plate mesoderm4.55e-1918
heart tube4.55e-1918
heart primordium4.55e-1918
cardiac mesoderm4.55e-1918
cardiogenic plate4.55e-1918
heart rudiment4.55e-1918
neurectoderm1.59e-1764
neural plate1.59e-1764
presumptive neural plate1.59e-1764
brain1.93e-1747
future brain1.93e-1747
regional part of brain2.57e-1646
brain grey matter2.48e-1529
regional part of telencephalon2.48e-1529
telencephalon2.48e-1529
ecto-epithelium1.83e-1473
cardiovascular system3.94e-1423
circulatory system3.94e-1423
ectoderm-derived structure1.45e-1395
ectoderm1.45e-1395
presumptive ectoderm1.45e-1395
posterior neural tube4.33e-1312
chordal neural plate4.33e-1312
compound organ5.11e-1343
regional part of cerebral cortex9.17e-1317
anterior neural tube1.40e-1240
cerebral cortex9.38e-1221
cerebral hemisphere9.38e-1221
pallium9.38e-1221
regional part of forebrain1.15e-1139
forebrain1.15e-1139
future forebrain1.15e-1139
epithelium4.44e-11174
cell layer7.70e-11176
spinal cord9.38e-106
dorsal region element9.38e-106
dorsum9.38e-106
pre-chordal neural plate2.10e-0949
splanchnic layer of lateral plate mesoderm8.63e-0933
regional part of spinal cord2.75e-085
gray matter of spinal cord2.75e-085
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