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FFCP PHASE1:Mm9::chr14:109313276..109313356,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76965
|EntrezGene=76965
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q810C1,B2RXM1,Q69Z70
|UniProt=Q810C1,B2RXM1,Q69Z70
|association_with_transcript=99bp_to_ENSMUST00000100322,NM_199065,uc007uyc.1_5end
|association_with_transcript=99bp_to_ENSMUST00000100322,NM_199065,uc007uyc.1_5end
|cluster_id=chr14:109313276..109313356,-
|description=CAGE_peak_1_at_Slitrk1_5end
|description=CAGE_peak_1_at_Slitrk1_5end
|id=chr14:109313276..109313356,-
|id=chr14:109313276..109313356,-
|ontology_enrichment_celltype=CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0000117!5.68e-14!23;CL:0000337!5.68e-14!23;CL:0000221!4.27e-11!44;CL:0000133!4.27e-11!44;CL:0002319!6.63e-11!43;CL:0000393!1.54e-10!39;CL:0000211!1.54e-10!39;CL:0000055!4.07e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.01e-18,33;CL:0000047,3.01e-18,33;CL:0000031,3.01e-18,33;CL:0000404,3.01e-18,33;CL:0000117,2.58e-16,23;CL:0000337,2.58e-16,23;CL:0000393,2.35e-13,39;CL:0000211,2.35e-13,39;CL:0000221,3.69e-11,44;CL:0000133,3.69e-11,44;CL:0002319,6.21e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.80e-31!73;UBERON:0005743!1.80e-31!73;UBERON:0000073!5.80e-31!75;UBERON:0001016!5.80e-31!75;UBERON:0004121!4.17e-30!102;UBERON:0000924!4.17e-30!102;UBERON:0006601!4.17e-30!102;UBERON:0002346!2.87e-28!71;UBERON:0003075!2.87e-28!71;UBERON:0007284!2.87e-28!71;UBERON:0001049!4.80e-26!52;UBERON:0005068!4.80e-26!52;UBERON:0006241!4.80e-26!52;UBERON:0007135!4.80e-26!52;UBERON:0000033!7.95e-25!63;UBERON:0000955!2.20e-24!50;UBERON:0006238!2.20e-24!50;UBERON:0002616!1.20e-23!49;UBERON:0003056!1.62e-22!49;UBERON:0003080!2.62e-21!40;UBERON:0002780!1.20e-20!39;UBERON:0001890!1.20e-20!39;UBERON:0006240!1.20e-20!39;UBERON:0002020!2.88e-19!34;UBERON:0002791!7.02e-16!29;UBERON:0003528!7.02e-16!29;UBERON:0001893!7.02e-16!29;UBERON:0000153!2.82e-12!94;UBERON:0007811!3.94e-12!86;UBERON:0000956!1.44e-11!21;UBERON:0001869!1.44e-11!21;UBERON:0000203!1.44e-11!21;UBERON:0002619!2.26e-09!17;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.64e-36,73;UBERON:0001016,4.75e-34,75;UBERON:0002346,6.23e-34,64;UBERON:0003075,6.23e-34,64;UBERON:0007284,6.23e-34,64;UBERON:0000073,1.85e-32,54;UBERON:0004121,3.73e-31,95;UBERON:0000924,3.73e-31,95;UBERON:0006601,3.73e-31,95;UBERON:0001049,5.43e-31,52;UBERON:0005068,5.43e-31,52;UBERON:0006241,5.43e-31,52;UBERON:0007135,5.43e-31,52;UBERON:0010371,4.38e-30,73;UBERON:0000955,8.48e-27,47;UBERON:0006238,8.48e-27,47;UBERON:0003056,2.84e-26,49;UBERON:0002616,6.20e-26,46;UBERON:0003080,8.06e-25,40;UBERON:0002780,4.93e-24,39;UBERON:0001890,4.93e-24,39;UBERON:0006240,4.93e-24,39;UBERON:0002020,2.19e-22,34;UBERON:0010314,1.84e-20,92;UBERON:0003528,2.31e-18,29;UBERON:0002791,2.31e-18,29;UBERON:0001893,2.31e-18,29;UBERON:0000956,3.05e-13,21;UBERON:0001869,3.05e-13,21;UBERON:0000203,3.05e-13,21;UBERON:0002619,1.23e-10,17;UBERON:0002021,5.67e-10,10;UBERON:0000411,5.67e-10,10;UBERON:0001950,5.67e-10,10
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6304112688837,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,35.20306418957,33.3264316941381,22.8179305262225,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,18.3530613786005,17.9557897981149,20.1911962897327,38.5628828945135,38.872863207484,16.9037302916637,15.0477389498631,10.1114066527102,18.7196997698961,27.0697156740598,28.5708151856613,25.3221672441972,23.9697626238313,26.045668527838,26.5223849051312,20.8222165711722,27.0452898564954,39.1856018679978,38.2979821349587,40.6350791899155,0.227178579999552,0.604572480854284,0,0,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0,0,0.79928715803342,0,0.445326417194474,1.73485326766136,1.52232739156071,1.15307748628029,1.65794904607885,1.29347577849275,0.251333182659351,0,0,0,1.13236794963186,0,0,0,38.6470652055242,52.7805701169907,0,0,0,0,33.8526845054899,16.0125210986519,18.7224984648168,70.9203226384488,77.9932144857508,26.8046577481833,31.9615288243483,0.407357455401265,0,0.252722758433675,1.26265113531884,2.99277018814219,4.59804208866946,2.88099407688559,4.37043971723574,3.87808045162569,5.12454881139399,3.5606655332697,2.58703370739016,0,1.70195472151037,4.22282697993477,2.84954452155847,3.61461423993277,3.1342694986995,1.02891068203972,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,43.9505992499026,37.251469681301,0,0,0.853153002140936,1.85789337488351,1.28867461322093,1.00841762311671,0.889512175379481,0.570676878337677,0,0.329397909448022,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0,0.758671603812327,0.571242563048644,1.1270773567308,1.01825663922657,1.16371492300575,1.75339549725796,0.885311519739602,0.738050739898011,1.41298855057237,1.1105744752962,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,1.47529281905711,1.10374698521893,29.7018591477415,25.4349359905081,0,0,5.99465616890888,6.24701990874622,5.38558494331997,3.34556317133573,3.7875774594007,3.11384183867716,4.45291771842384,6.72188473196017,3.55759000151871,42.7357350841003,0.567760340833074,1.06839362200353,0.977321756121456,0.164970122972535,0,0.971122544619926,0.604647113929502,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0,0,0,0,15.6602218646742,7.0223826672211,6.85601024048599,9.85950361145325,9.04435191575595,11.9507107793387,9.54384319492302,10.3518082698964,0,0,0,0.16488625294148,0.484393280087717,0.361877549568935,0,0.328281799490123,0,31.3368760397761,0,4.74689796315412,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.316335993581135,1.21991680276109,0.324016022465404,0.627264888043406,0.436725127492355,0.539457385539283,1.73572257023205,2.35580347785627,0.388844919875379,0,0,1.49516546043979,2.48187735685646,1.55560950675238,0,0.337912250981556,0.234714477291508,0,0,0,0,0,1.01362607645082,0.616265742988964,0.25984164595559,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,49.1334103076848,49.7151255427751,55.5708648036215,52.9307801618558,73.3038296154587,88.381085994595,73.5774525252668,60.7933624352698,63.4399372577886,61.0957167867148,0.726511433089237,9.17757208822371,7.0000778359195,4.61902762429759,5.03071590307158,3.12533964365024,6.66740183404846,7.0051919461224,5.77654577265267,7.58091635291392,5.57654459758527,5.47016390019621,6.367622507952,6.14641463086745,7.52404643318534,10.0021675169445,7.53248118641561,6.94473193669338,6.59337441285291,6.62395140604788,7.54312355247914,5.6792257970988,6.43777712857767,7.99405291477807,5.55245344450451,6.34609559187574,6.58540702341981,7.10288220882176,7.87663860305998,6.17256498823512,3.6776855618494,6.30428687203606,5.72923460437565,6.50734732981057,4.82266527452853,8.74337022782811,4.91256377735358,4.08255002691767,3.82576664137687,2.8676884485537,2.31867835620421
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6304112688837,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,35.20306418957,33.3264316941381,22.8179305262225,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,18.3530613786005,17.9557897981149,20.1911962897327,38.5628828945135,38.872863207484,16.9037302916637,15.0477389498631,10.1114066527102,18.7196997698961,27.0697156740598,28.5708151856613,25.3221672441972,23.9697626238313,26.045668527838,26.5223849051312,20.8222165711722,27.0452898564954,39.1856018679978,38.2979821349587,40.6350791899155,0.227178579999552,0.604572480854284,0,0,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0,0,0.79928715803342,0,0.445326417194474,1.73485326766136,1.52232739156071,1.15307748628029,1.65794904607885,1.29347577849275,0.251333182659351,0,0,0,1.13236794963186,0,0,0,38.6470652055242,52.7805701169907,0,0,0,0,33.8526845054899,16.0125210986519,18.7224984648168,70.9203226384488,77.9932144857508,26.8046577481833,31.9615288243483,0.407357455401265,0,0.252722758433675,1.26265113531884,2.99277018814219,4.59804208866946,2.88099407688559,4.37043971723574,3.87808045162569,5.12454881139399,3.5606655332697,2.58703370739016,0,1.70195472151037,4.22282697993477,2.84954452155847,3.61461423993277,3.1342694986995,1.02891068203972,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,43.9505992499026,37.251469681301,0,0,0.853153002140936,1.85789337488351,1.28867461322093,1.00841762311671,0.889512175379481,0.570676878337677,0,0.329397909448022,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0,0.758671603812327,0.571242563048644,1.1270773567308,1.01825663922657,1.16371492300575,1.75339549725796,0.885311519739602,0.738050739898011,1.41298855057237,1.1105744752962,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,1.47529281905711,1.10374698521893,29.7018591477415,25.4349359905081,0,0,5.99465616890888,6.24701990874622,5.38558494331997,3.34556317133573,3.7875774594007,3.11384183867716,4.45291771842384,6.72188473196017,3.55759000151871,42.7357350841003,0.567760340833074,1.06839362200353,0.977321756121456,0.164970122972535,0,0.971122544619926,0.604647113929502,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0,0,0,0,15.6602218646742,7.0223826672211,6.85601024048599,9.85950361145325,9.04435191575595,11.9507107793387,9.54384319492302,10.3518082698964,0,0,0,0.16488625294148,0.484393280087717,0.361877549568935,0,0.328281799490123,0,31.3368760397761,0,4.74689796315412,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.316335993581135,1.21991680276109,0.324016022465404,0.627264888043406,0.436725127492355,0.539457385539283,1.73572257023205,2.35580347785627,0.388844919875379,0,0,1.49516546043979,2.48187735685646,1.55560950675238,0,0.337912250981556,0.234714477291508,0,0,0,0,0,1.01362607645082,0.616265742988964,0.25984164595559,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,49.1334103076848,49.7151255427751,55.5708648036215,52.9307801618558,73.3038296154587,88.381085994595,73.5774525252668,60.7933624352698,63.4399372577886,61.0957167867148,0.726511433089237,9.17757208822371,7.0000778359195,4.61902762429759,5.03071590307158,3.12533964365024,6.66740183404846,7.0051919461224,5.77654577265267,7.58091635291392,5.57654459758527,5.47016390019621,6.367622507952,6.14641463086745,7.52404643318534,10.0021675169445,7.53248118641561,6.94473193669338,6.59337441285291,6.62395140604788,7.54312355247914,5.6792257970988,6.43777712857767,7.99405291477807,5.55245344450451,6.34609559187574,6.58540702341981,7.10288220882176,7.87663860305998,6.17256498823512,3.6776855618494,6.30428687203606,5.72923460437565,6.50734732981057,4.82266527452853,8.74337022782811,4.91256377735358,4.08255002691767,3.82576664137687,2.8676884485537,2.31867835620421
|short_description=p1@Slitrk1
|short_description=p1@Slitrk1
}}
}}

Latest revision as of 15:55, 25 September 2015

Short description:p1@Slitrk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slitrk1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 99bp_to_ENSMUST00000100322, NM_199065, uc007uyc.1_5end
EntrezGene:Slitrk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slitrk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C335.20
Mouse Granule cells, donor2.CNhs12357.11731-123E333.33
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D538.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B238.65
cerebellum, neonate N30.CNhs11135.1395-42I252.78
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A433.85
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F118.72
cortex, adult.CNhs10473.12-14D570.92
cortex, neonate N30.CNhs11107.1392-42F277.99
diencephalon, adult.CNhs10482.20-12F226.80
diencephalon, neonate N30.CNhs11201.1388-42B231.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C63.88
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E843.95
hippocampus, neonate N00.CNhs11228.627-43G137.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C229.70
medulla oblongata, neonate N30.CNhs11200.1396-42A325.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I942.74
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C931.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A249.72
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A355.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A473.30
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A588.38
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A673.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A760.79
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A961.10
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.01e-1833
neuronal stem cell3.01e-1833
neuroblast3.01e-1833
electrically signaling cell3.01e-1833
CNS neuron (sensu Vertebrata)2.58e-1623
neuroblast (sensu Vertebrata)2.58e-1623
electrically responsive cell2.35e-1339
electrically active cell2.35e-1339
ectodermal cell3.69e-1144
neurectodermal cell3.69e-1144
neural cell6.21e-1143

Uber anatomy
Ontology termp-valuen
central nervous system8.64e-3673
nervous system4.75e-3475
neurectoderm6.23e-3464
neural plate6.23e-3464
presumptive neural plate6.23e-3464
regional part of nervous system1.85e-3254
ectoderm-derived structure3.73e-3195
ectoderm3.73e-3195
presumptive ectoderm3.73e-3195
neural tube5.43e-3152
neural rod5.43e-3152
future spinal cord5.43e-3152
neural keel5.43e-3152
ecto-epithelium4.38e-3073
brain8.48e-2747
future brain8.48e-2747
pre-chordal neural plate2.84e-2649
regional part of brain6.20e-2646
anterior neural tube8.06e-2540
regional part of forebrain4.93e-2439
forebrain4.93e-2439
future forebrain4.93e-2439
gray matter2.19e-2234
structure with developmental contribution from neural crest1.84e-2092
brain grey matter2.31e-1829
regional part of telencephalon2.31e-1829
telencephalon2.31e-1829
cerebral cortex3.05e-1321
cerebral hemisphere3.05e-1321
pallium3.05e-1321
regional part of cerebral cortex1.23e-1017
occipital lobe5.67e-1010
visual cortex5.67e-1010
neocortex5.67e-1010
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