FFCP PHASE1:Mm9::chr11:33947115..33947242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16822 | |EntrezGene=16822 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1285 | |||
|TSSclassifier=NA | |||
|UniProt=B1ATD1,Q60787,Q8CAS1 | |UniProt=B1ATD1,Q60787,Q8CAS1 | ||
|association_with_transcript=0bp_to_ENSMUST00000109329,ENSMUST00000169878,NM_010696,uc007iku.1,uc007ikv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000109329,ENSMUST00000169878,NM_010696,uc007iku.1,uc007ikv.1_5end | ||
|cluster_id=chr11:33947115..33947242,+ | |||
|description=CAGE_peak_1_at_Lcp2_5end | |description=CAGE_peak_1_at_Lcp2_5end | ||
|id=chr11:33947115..33947242,+ | |id=chr11:33947115..33947242,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.53e-08!32;CL:0002032!3.53e-08!32;CL:0000037!3.53e-08!32;CL:0000566!3.53e-08!32;CL:0000837!3.53e-08!32;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000624!8.65e-07!8 | |ontology_enrichment_celltype=CL:0000988!3.53e-08!32;CL:0002032!3.53e-08!32;CL:0000037!3.53e-08!32;CL:0000566!3.53e-08!32;CL:0000837!3.53e-08!32;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000624!8.65e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-08,32;CL:0002032,2.75e-08,32;CL:0000037,2.75e-08,32;CL:0000837,2.75e-08,32;CL:0000791,2.01e-07,9;CL:0000789,2.01e-07,9;CL:0002420,2.01e-07,9;CL:0002419,2.01e-07,9;CL:0000790,2.01e-07,9;CL:0000624,7.82e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.75e-22!70;UBERON:0002193!5.60e-19!48;UBERON:0002390!1.33e-18!45;UBERON:0003061!1.33e-18!45;UBERON:0005057!2.72e-14!51;UBERON:0004177!8.74e-12!29;UBERON:0003081!7.58e-11!88;UBERON:0001041!2.85e-10!92;UBERON:0000077!4.38e-10!97;UBERON:0000926!5.44e-10!193;UBERON:0004120!5.44e-10!193;UBERON:0006603!5.44e-10!193;UBERON:0003408!4.05e-09!24;UBERON:0002370!5.28e-09!23;UBERON:0000974!5.28e-09!23;UBERON:0004807!5.28e-09!23;UBERON:0005058!5.28e-09!23;UBERON:0003351!5.28e-09!23;UBERON:0009113!5.28e-09!23;UBERON:0003295!5.28e-09!23;UBERON:0009722!5.28e-09!23;UBERON:0005562!5.28e-09!23;UBERON:0007690!5.28e-09!23;UBERON:0006562!1.02e-08!24;UBERON:0001557!1.02e-08!24;UBERON:0001042!1.02e-08!24;UBERON:0008814!1.02e-08!24;UBERON:0009145!1.02e-08!24;UBERON:0002530!1.57e-08!65;UBERON:0002368!2.69e-08!60;UBERON:0001007!5.45e-08!128;UBERON:0001555!5.45e-08!128;UBERON:0007026!5.45e-08!128;UBERON:0003104!6.46e-08!131;UBERON:0009142!6.46e-08!131;UBERON:0004921!6.51e-08!126;UBERON:0004185!6.51e-08!126;UBERON:0004119!6.67e-08!130;UBERON:0000925!6.67e-08!130;UBERON:0006595!6.67e-08!130;UBERON:0002371!1.27e-07!16;UBERON:0000949!3.59e-07!72;UBERON:0001474!4.52e-07!22;UBERON:0004765!4.52e-07!22;UBERON:0001434!4.52e-07!22;UBERON:0001004!6.42e-07!42;UBERON:0000065!9.20e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.13e-19,48;UBERON:0002405,2.13e-19,48;UBERON:0002390,5.05e-19,45;UBERON:0003061,5.05e-19,45;UBERON:0004177,3.90e-12,29;UBERON:0005057,3.90e-12,29;UBERON:0001041,8.59e-12,80;UBERON:0000077,2.84e-11,35;UBERON:0003081,2.13e-10,87;UBERON:0003408,1.97e-09,24;UBERON:0002370,2.55e-09,23;UBERON:0000974,2.55e-09,23;UBERON:0004807,2.55e-09,23;UBERON:0005058,2.55e-09,23;UBERON:0003351,2.55e-09,23;UBERON:0009113,2.55e-09,23;UBERON:0003295,2.55e-09,23;UBERON:0009722,2.55e-09,23;UBERON:0005562,2.55e-09,23;UBERON:0007690,2.55e-09,23;UBERON:0006562,5.07e-09,24;UBERON:0001557,5.07e-09,24;UBERON:0001042,5.07e-09,24;UBERON:0008814,5.07e-09,24;UBERON:0009145,5.07e-09,24;UBERON:0001007,5.08e-09,116;UBERON:0001555,5.08e-09,116;UBERON:0007026,5.08e-09,116;UBERON:0004921,5.95e-09,114;UBERON:0004119,6.61e-09,118;UBERON:0000925,6.61e-09,118;UBERON:0006595,6.61e-09,118;UBERON:0002530,1.14e-08,65;UBERON:0002368,1.97e-08,60;UBERON:0000926,1.11e-07,120;UBERON:0004120,1.11e-07,120;UBERON:0006603,1.11e-07,120;UBERON:0002371,1.13e-07,16;UBERON:0001004,2.70e-07,42;UBERON:0000949,3.52e-07,72;UBERON:0000065,3.88e-07,41;UBERON:0001474,5.19e-07,22;UBERON:0004765,5.19e-07,22;UBERON:0001434,5.19e-07,22;UBERON:0005911,8.37e-07,69 | |||
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0,220.930006408537,665.085923444474,722.323128229672,360.585041082914,326.507446767912,204.756072997722,189.789693651643,12.3250611871795,25.7143589585079,12.5921138063066,31.0730232877864,33.4559217998003,19.5219239827094,9.77997836737302,6.95036658406197,1.82839852397255,3.83981814704176,5.04700418347774,0,0,0,2.09025761402011,5.79669298447841,3.76941868114018,0,0,0,0,0.332469290716985,0,149.834323803813,127.357661157379,157.580646936113,202.351631882669,204.230600002575,214.59557603977,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0.838913030288682,137.818806982155,148.217365421827,0.771778308107841,2.86533439938757,1.03134418455488,0.809265843438391,0,0,0,0,39.5955875603816,51.4210508534827,36.2344858622511,13.1824048628098,14.6002956022191,1.45165457231869,0.540023753326763,0.630974884054146,1.42825492201902,1.10434270475807,0.61245399607477,0.287536413054709,0,1.10115880999389,1.91531007127782,1.53606533256243,0.395658863190582,0.640413505216868,0,1.67509799400829,1.68828783009504,1.06958773443767,3.24091444021034,1.85083185038834,0.372798891650601,4.54357159999104,0,19.1310562543107,6.88339101585109,0,0.539703191637817,3.24888208723835,0.448026887097336,13.3422199125164,0,0,0,0,0,0,0,0,0,0,10.7332846935916,324.190230326259,12.9144660986398,3.64319186208885,1.52232739156071,2.99800146432876,3.46662073271032,4.70354828542819,4.27266410520897,0.988779870937496,15.9059292611903,66.3457913962406,10.8383789464764,24.9550915860245,13.5765070877862,7.45567044872489,0.878342391034642,0.209446706813455,13.2837668708468,31.8708231185748,25.1959147017231,32.4029079036315,1.3481157546434,3.66000482254901,0.502617408451458,2.78118912307642,0.255715457330331,1.24672826735736,2.10913641988085,3.1570202793598,28.6136032403214,3.0326731012041,1.89397670297827,1.82168620147785,0.229902104433473,1.26043490863744,0.90422890701429,1.08858398642125,1.40925092313335,1.49922759295566,2.58703370739016,1.29340795759705,1.32374256117473,1.23165786914764,1.97276159184817,3.33656699070717,5.92028683087683,8.0255033199098,1.59227413454795,25.9818879305897,27.7935739683892,38.362072418405,2.48550927042602,0.703578179943289,2.70093092191522,1.42046841351126,1.96764231747404,1.07986979021165,1.39520366850245,1.60964040839772,3.03589890154641,1.97471819896177,3.447516745661,3.56702762001765,5.84799949701329,9.22110484222413,5.09984391289413,1.89260953707715,1.74937841044784,13.5471701023357,3.96675849995316,2.13288250535234,2.09013004674395,3.8660238396628,3.83198696784351,4.66993892074228,4.94586627892654,9.01605216934572,3.62337700392824,5.27803938480566,9.15199771389294,7.60359939764569,6.29173586057955,9.07779809473716,9.55878111620963,1.89667900953082,1.25673363870702,2.25415471346161,2.03651327845314,1.35766741017338,1.19230893813542,1.07502113111237,1.91893192373483,3.29697328466887,1.1105744752962,6.52195779591728,13.6812986687197,14.3488066432638,13.2668646307064,20.2860121388503,18.5706413009361,14.7682994033223,21.8649064462616,26.5901771911058,18.6701760967895,23.0029130443767,32.3762624471598,20.2824487524464,11.6186283855671,8.7904732625737,11.0962009913574,29.0062508561569,1.51593129416388,1.62964976442026,1.69745085775188,3.05097322775053,4.69017520837084,4.76087281772027,6.43941037930736,11.1920952315396,10.6303051031412,11.1618338060241,14.7476983244164,21.0675677876393,16.7792907954553,49.7611236999598,109.325042447561,6.39293554924747,12.1412168374082,3.05046120976805,1.05490517932983,0,6.31177318010932,0,0,0,0,0,0,0,0,0,1.28528526568723,5.10984306749767,3.20518086601059,2.44330439030364,11.8778488540226,3.98235415019888,2.6705869977048,0.906970670894253,1.88605079755898,2.65771703592696,3.07435147943927,4.9101375701962,5.45300594216258,4.9909632973861,7.58488219045958,4.21674434299995,1.03135543248187,1.70219802876894,1.62054984628179,1.81102157295856,2.14337035031592,2.48276327099183,1.07021290561242,1.97458824722545,2.13125464380219,5.86679270159276,1.48282449604674,1.32317038832977,9.56340267060584,10.8181165886257,4.28221766989907,2.74556391207214,3.11867709515616,10.4933101186746,2.41052892613663,56.5582615440892,23.5281029478074,42.2243522402943,34.6597960888631,39.6413260390973,45.7556346413045,59.8324073578371,46.8837365284254,46.9879910935041,2.86401185404534,1.73984796469624,2.23651413839534,1.83609079397062,3.13632444021703,3.71216358368502,3.50647300600534,5.86839535649885,4.18809507174447,5.18459893167171,8.69875038321696,0.56369293868419,1.34564891439581,0.330916980914195,1.55560950675238,1.16243841129958,0.675824501963113,0.821500670520278,2.3436789271911,1.04859344425711,1.93267296660805,2.01621004380506,150.421293419013,16.8261928690836,28.553646091822,47.4211003868952,60.3319964399412,107.685294291446,111.661572604051,121.105412283153,128.63125723394,133.66673887287,144.383097115956,164.606360569442,155.382124249132,200.327010339209,3.40095575422817,0,0,0,5.02292944483695,9.3841237725591,11.1722490803032,10.9327873330324,5.01572104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|short_description=p1@Lcp2 | |short_description=p1@Lcp2 | ||
}} | }} |
Latest revision as of 07:55, 27 September 2015
Short description: | p1@Lcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1285 |
Association with transcript: | 0bp_to_ENSMUST00000109329, ENSMUST00000169878, NM_010696, uc007iku.1, uc007ikv.1_5end |
EntrezGene: | Lcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.75e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.75e-08 | 32 |
hematopoietic stem cell | 2.75e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.75e-08 | 32 |
mature alpha-beta T cell | 2.01e-07 | 9 |
alpha-beta T cell | 2.01e-07 | 9 |
immature T cell | 2.01e-07 | 9 |
mature T cell | 2.01e-07 | 9 |
immature alpha-beta T cell | 2.01e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.82e-07 | 8 |