FFCP PHASE1:Mm9::chr11:69499439..69499452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69499439..69499452,+ | |||
|description=CAGE_peak_at_chr11:69499439..69499452,+ | |description=CAGE_peak_at_chr11:69499439..69499452,+ | ||
|id=chr11:69499439..69499452,+ | |id=chr11:69499439..69499452,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.40e-13,3;CL:0000359,1.40e-13,3;CL:0002539,1.40e-13,3;CL:0000514,1.40e-13,3;CL:0000222,4.10e-13,7;CL:0000213,1.83e-11,1;CL:0002078,1.83e-11,1;CL:0000115,1.83e-11,1;CL:0002262,1.83e-11,1;CL:1000398,1.83e-11,1;CL:0000680,2.94e-07,6;CL:0000187,2.94e-07,6;CL:0000056,2.94e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!5.40e-08!17;UBERON:0005157!1.25e-07!27;UBERON:0002048!1.59e-07!14;UBERON:0000117!1.59e-07!14;UBERON:0000171!1.59e-07!14;UBERON:0000170!1.59e-07!14;UBERON:0005597!1.59e-07!14;UBERON:0000118!1.59e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.52e-18,5;UBERON:0007500,4.52e-18,5;UBERON:0001981,4.52e-18,5;UBERON:0002049,4.52e-18,5;UBERON:0007798,4.52e-18,5;UBERON:0004537,4.52e-18,5;UBERON:0006965,4.52e-18,5;UBERON:0001135,1.40e-13,3;UBERON:0004237,1.40e-13,3;UBERON:0004695,1.40e-13,3;UBERON:0002111,1.40e-13,3;UBERON:0004178,1.40e-13,3;UBERON:0002394,1.83e-11,1;UBERON:0001281,1.83e-11,1;UBERON:0000353,1.83e-11,1;UBERON:0003497,1.83e-11,1;UBERON:0003909,1.83e-11,1;UBERON:0003928,1.83e-11,1;UBERON:0003835,1.83e-11,1;UBERON:0003513,1.83e-11,1;UBERON:0001280,1.83e-11,1;UBERON:0004647,1.83e-11,1;UBERON:0002294,1.83e-11,1;UBERON:0001173,1.83e-11,1;UBERON:0004912,1.83e-11,1;UBERON:0005171,1.83e-11,1;UBERON:0000993,3.65e-11,1;UBERON:0000947,1.97e-10,4;UBERON:0001637,1.97e-10,4;UBERON:0004573,1.97e-10,4;UBERON:0003509,1.97e-10,4;UBERON:0004571,1.97e-10,4;UBERON:0010191,1.97e-10,4;UBERON:0004572,1.97e-10,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,0.367093504323363,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0.373220911830279,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.664394068946325,0.797273843287435,3.11340297959902,0.172684981865896,0.433947175744535,3.01582567878545,0,0,0.551873492609465,0.321101179975584,0,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.35613120733451,0.162886959353576,1.48473110675282,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,1.10295709559758,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,0.367093504323363,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0.373220911830279,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.664394068946325,0.797273843287435,3.11340297959902,0.172684981865896,0.433947175744535,3.01582567878545,0,0,0.551873492609465,0.321101179975584,0,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.35613120733451,0.162886959353576,1.48473110675282,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,1.10295709559758,0 | ||
|short_description=p@chr11:69499439..69499452,+ | |short_description=p@chr11:69499439..69499452,+ | ||
}} | }} |
Latest revision as of 10:29, 6 August 2015
Short description: | p@chr11:69499439..69499452, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69499439..69499452, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.40e-13 | 3 |
vascular associated smooth muscle cell | 1.40e-13 | 3 |
aortic smooth muscle cell | 1.40e-13 | 3 |
smooth muscle myoblast | 1.40e-13 | 3 |
mesodermal cell | 4.10e-13 | 7 |
lining cell | 1.83e-11 | 1 |
meso-epithelial cell | 1.83e-11 | 1 |
endothelial cell | 1.83e-11 | 1 |
endothelial cell of sinusoid | 1.83e-11 | 1 |
endothelial cell of hepatic sinusoid | 1.83e-11 | 1 |
muscle precursor cell | 2.94e-07 | 6 |
muscle cell | 2.94e-07 | 6 |
myoblast | 2.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.52e-18 | 5 |
epithelial tube open at both ends | 4.52e-18 | 5 |
blood vessel | 4.52e-18 | 5 |
vasculature | 4.52e-18 | 5 |
vascular system | 4.52e-18 | 5 |
blood vasculature | 4.52e-18 | 5 |
vascular cord | 4.52e-18 | 5 |
smooth muscle tissue | 1.40e-13 | 3 |
blood vessel smooth muscle | 1.40e-13 | 3 |
arterial system smooth muscle | 1.40e-13 | 3 |
artery smooth muscle tissue | 1.40e-13 | 3 |
aorta smooth muscle tissue | 1.40e-13 | 3 |
bile duct | 1.83e-11 | 1 |
hepatic sinusoid | 1.83e-11 | 1 |
parenchyma | 1.83e-11 | 1 |
abdomen blood vessel | 1.83e-11 | 1 |
sinusoid | 1.83e-11 | 1 |
digestive system duct | 1.83e-11 | 1 |
abdominal segment blood vessel | 1.83e-11 | 1 |
trunk blood vessel | 1.83e-11 | 1 |
liver parenchyma | 1.83e-11 | 1 |
liver lobule | 1.83e-11 | 1 |
biliary system | 1.83e-11 | 1 |
biliary tree | 1.83e-11 | 1 |
biliary bud | 1.83e-11 | 1 |
hepatic duct | 1.83e-11 | 1 |
oviduct | 3.65e-11 | 1 |
aorta | 1.97e-10 | 4 |
artery | 1.97e-10 | 4 |
systemic artery | 1.97e-10 | 4 |
arterial blood vessel | 1.97e-10 | 4 |
systemic arterial system | 1.97e-10 | 4 |
aortic system | 1.97e-10 | 4 |
arterial system | 1.97e-10 | 4 |