Personal tools

FFCP PHASE1:Mm9::chr16:23890891..23890947,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20604
|EntrezGene=20604
|HGNC=
|HGNC=
|MCL_coexpression_id=414
|TSSclassifier=NA
|UniProt=P60041,Q545V6
|UniProt=P60041,Q545V6
|association_with_transcript=0bp_to_ENSMUST00000004480,NM_009215,uc007ytx.1_5end
|association_with_transcript=0bp_to_ENSMUST00000004480,NM_009215,uc007ytx.1_5end
|cluster_id=chr16:23890891..23890947,-
|description=CAGE_peak_1_at_Sst_5end
|description=CAGE_peak_1_at_Sst_5end
|id=chr16:23890891..23890947,-
|id=chr16:23890891..23890947,-
|ontology_enrichment_celltype=CL:0000117!1.21e-11!23;CL:0000337!1.21e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-12,23;CL:0000337,2.05e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.64e-17!52;UBERON:0005068!2.64e-17!52;UBERON:0006241!2.64e-17!52;UBERON:0007135!2.64e-17!52;UBERON:0002020!1.25e-16!34;UBERON:0000955!9.01e-16!50;UBERON:0006238!9.01e-16!50;UBERON:0002616!1.98e-15!49;UBERON:0002346!1.98e-14!71;UBERON:0003075!1.98e-14!71;UBERON:0007284!1.98e-14!71;UBERON:0003080!2.90e-14!40;UBERON:0002791!1.00e-13!29;UBERON:0003528!1.00e-13!29;UBERON:0001893!1.00e-13!29;UBERON:0002780!1.10e-13!39;UBERON:0001890!1.10e-13!39;UBERON:0006240!1.10e-13!39;UBERON:0003056!2.20e-13!49;UBERON:0000160!9.60e-13!43;UBERON:0005409!1.15e-12!59;UBERON:0000033!2.12e-12!63;UBERON:0001017!2.41e-12!73;UBERON:0005743!2.41e-12!73;UBERON:0000073!6.06e-12!75;UBERON:0001016!6.06e-12!75;UBERON:0000956!6.50e-10!21;UBERON:0001869!6.50e-10!21;UBERON:0000203!6.50e-10!21;UBERON:0002619!1.50e-08!17;UBERON:0002021!3.28e-08!10;UBERON:0000411!3.28e-08!10;UBERON:0001950!3.28e-08!10;UBERON:0002108!3.28e-08!16;UBERON:0004121!4.31e-08!102;UBERON:0000924!4.31e-08!102;UBERON:0006601!4.31e-08!102;UBERON:0007811!2.89e-07!86;UBERON:0001045!3.33e-07!13;UBERON:0000153!7.05e-07!94;UBERON:0001264!7.99e-07!12;UBERON:0003922!7.99e-07!12;UBERON:0002114!7.99e-07!12;UBERON:0003923!7.99e-07!12;UBERON:0003924!7.99e-07!12;UBERON:0003921!7.99e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.74e-19,54;UBERON:0001049,4.57e-18,52;UBERON:0005068,4.57e-18,52;UBERON:0006241,4.57e-18,52;UBERON:0007135,4.57e-18,52;UBERON:0002020,1.62e-17,34;UBERON:0002346,5.33e-16,64;UBERON:0003075,5.33e-16,64;UBERON:0007284,5.33e-16,64;UBERON:0003080,5.22e-15,40;UBERON:0000955,8.18e-15,47;UBERON:0006238,8.18e-15,47;UBERON:0002616,1.87e-14,46;UBERON:0003528,2.13e-14,29;UBERON:0002791,2.13e-14,29;UBERON:0001893,2.13e-14,29;UBERON:0002780,2.18e-14,39;UBERON:0001890,2.18e-14,39;UBERON:0006240,2.18e-14,39;UBERON:0003056,9.22e-14,49;UBERON:0001017,1.13e-13,73;UBERON:0001016,4.70e-13,75;UBERON:0010371,1.48e-11,73;UBERON:0000956,2.64e-10,21;UBERON:0001869,2.64e-10,21;UBERON:0000203,2.64e-10,21;UBERON:0004121,7.11e-09,95;UBERON:0000924,7.11e-09,95;UBERON:0006601,7.11e-09,95;UBERON:0002619,7.76e-09,17;UBERON:0002021,1.01e-08,10;UBERON:0000411,1.01e-08,10;UBERON:0001950,1.01e-08,10;UBERON:0000160,1.23e-07,31;UBERON:0005409,2.49e-07,47;UBERON:0001264,3.14e-07,12
|phase1_expression=0,5.23463111459042,4.09499315450582,6.35174843744343,8.5152274090879,200.615729934708,153.950730152451,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,106.644285849442,0,0,202.390414833659,188.115610475079,21.2465826722557,65.0450614200203,44.8180163986649,188.12318526181,120.218371895487,162.085003289028,0,0,15.8481681015439,7.79899373328441,35.2417448160004,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0,0,0,323.908653836216,469.214998614293,384.101830524745,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,54.8518049111847,70.3380938708108,59.9426139851439,591.297537715873,694.852429833776,252.576027981235,223.319947472491,242.673759665046,448.171635667512,223.835903663334,309.363557978074,125.951404782335,126.344435814928,105.745414223022,469.864987319324,351.7266312698,495.219121044642,546.830654639127,506.558440283208,222.188139423758,0.075726193333184,1.28471652181535,0.579728977403356,0,0,1.07940638327563,0,0,55.475545952042,0,0,0,0,0,0,0,0,0,0,74.333705697108,0,0.148442139064825,2.25530924795977,3.34912026143355,1.38369298353635,3.16517545160507,1.64624189989987,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0,0,182.66392599376,6.44117753425404,5.23616767033638,148.165092020983,0.11981512450592,0,0,529.809491574858,851.866122448283,411.392348817518,1006.61663823347,767.146371990992,464.821855679736,499.540848985626,0.101839363850316,0,0,4.20883711772948,9.62891277924007,26.8985462187163,13.6847218652065,4.21973489940002,0.476255494059295,1.5373646434182,2.15513966487376,3.3631438196072,0,1.51284864134255,7.2139960907219,12.0557652835166,11.1218899690239,4.52727816478817,5.35033554660653,0,0,0,0,0.207125772535502,0.703578179943289,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,982.264349743038,122.147774894211,267.96963299986,76.4262137657643,1.06644125267617,0.464473343720877,7.34544529535932,39.7316543507985,68.4924375042201,122.315077590376,118.157736324583,131.759163779209,71.6305345080768,103.457365461398,95.5324026883689,142.912285976021,106.556058588224,145.173988202434,1.51734320762465,2.05647322697512,0,0.610953983535943,0.387904974335251,0.911765658574141,0.126473074248515,0,0,0,0.592905254174298,0,0.196558995113203,0,0,0.72353147925725,1.52775511068852,0,0.810676133875177,1.09824565275233,0,1.11642284300551,3.12037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.554259570499814,1.32643988239339,0.488894929326078,0.169745085775188,0,0.167506257441816,0,3.51240566144038,0,0,0,0,0.172684981865896,0,0,0,0,0,413.578319808552,358.433337598957,0,0,1.26203287766503,1.56175497718655,0,0,0,0,0,0,0,106.036034419196,0,0.712262414669021,0,0,266.817728063325,10.1967867185092,57.1391522663379,254.994067829974,909.234528179899,883.261180042904,625.913326053432,649.99830830578,570.039308037169,280.640641047005,220.324891921747,250.619370093094,1.70219802876894,32.7711191136985,14.6175312674513,6.00143698088458,1.06404140185364,1.96205699362278,3.1264313914403,6.08929898229199,0,0,4.41056796109924,0,0.322928853391811,1.62844897306021,0.835606408021955,0.328281799490123,115.426411305421,446.689552543318,0,5.57244543500701,2.03713980106683,0.565105371014073,0.136694227721025,0,0,0,0,2086.90997098104,0.949007980743406,14.4356821660063,11.6645768087545,11.2907679847813,39.7419866018043,110.049306650014,225.23066685154,700.458900749263,22.2937754061884,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.89606672376907,3.85177909051312,1.64337531463724,0.77952493786677,0.895133478337407,0.993406773906324,0.721172697119813,0.886137163047463,1.21159739937777,1.295515713135,0.806609481094724,2.33898913775406,1.44317762460494,1.05189211963412,0,0,0,0,0,0,0,0.857473516316263,0,849.386771296068,831.807702368469,759.0865553072,703.22322215037,949.52437240211,1031.86806383433,959.206972829396,1052.400651935,886.799694382088,899.867421824663,25.84304954846,46.6859101879206,39.2687293234509,39.3832881650636,30.3939085810574,36.5848581815528,50.0055137553634,46.9759930504679,62.579245870404,56.3514782233268,61.8489491732185,54.7016390019621,47.3826027797605,50.7719458570613,50.0262934603392,53.8211871149873,38.9371335174714,37.0385703290314,46.5657067907736,46.8092566027384,47.6588260815727,42.594193478241,38.626662771466,43.1678857398016,47.8075652509879,39.5996364933046,44.268569435211,46.3002692130603,43.0499040891382,46.5748085475923,41.2849863072126,35.4616136552028,42.150797446478,46.6359891969758,36.845162697398,141.642597690815,52.4006802917715,47.7013739987222,18.1723915465401,20.2944105589954,15.5351449865682
|phase1_expression=0,5.23463111459042,4.09499315450582,6.35174843744343,8.5152274090879,200.615729934708,153.950730152451,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,106.644285849442,0,0,202.390414833659,188.115610475079,21.2465826722557,65.0450614200203,44.8180163986649,188.12318526181,120.218371895487,162.085003289028,0,0,15.8481681015439,7.79899373328441,35.2417448160004,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0,0,0,323.908653836216,469.214998614293,384.101830524745,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,54.8518049111847,70.3380938708108,59.9426139851439,591.297537715873,694.852429833776,252.576027981235,223.319947472491,242.673759665046,448.171635667512,223.835903663334,309.363557978074,125.951404782335,126.344435814928,105.745414223022,469.864987319324,351.7266312698,495.219121044642,546.830654639127,506.558440283208,222.188139423758,0.075726193333184,1.28471652181535,0.579728977403356,0,0,1.07940638327563,0,0,55.475545952042,0,0,0,0,0,0,0,0,0,0,74.333705697108,0,0.148442139064825,2.25530924795977,3.34912026143355,1.38369298353635,3.16517545160507,1.64624189989987,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0,0,182.66392599376,6.44117753425404,5.23616767033638,148.165092020983,0.11981512450592,0,0,529.809491574858,851.866122448283,411.392348817518,1006.61663823347,767.146371990992,464.821855679736,499.540848985626,0.101839363850316,0,0,4.20883711772948,9.62891277924007,26.8985462187163,13.6847218652065,4.21973489940002,0.476255494059295,1.5373646434182,2.15513966487376,3.3631438196072,0,1.51284864134255,7.2139960907219,12.0557652835166,11.1218899690239,4.52727816478817,5.35033554660653,0,0,0,0,0.207125772535502,0.703578179943289,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,982.264349743038,122.147774894211,267.96963299986,76.4262137657643,1.06644125267617,0.464473343720877,7.34544529535932,39.7316543507985,68.4924375042201,122.315077590376,118.157736324583,131.759163779209,71.6305345080768,103.457365461398,95.5324026883689,142.912285976021,106.556058588224,145.173988202434,1.51734320762465,2.05647322697512,0,0.610953983535943,0.387904974335251,0.911765658574141,0.126473074248515,0,0,0,0.592905254174298,0,0.196558995113203,0,0,0.72353147925725,1.52775511068852,0,0.810676133875177,1.09824565275233,0,1.11642284300551,3.12037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.554259570499814,1.32643988239339,0.488894929326078,0.169745085775188,0,0.167506257441816,0,3.51240566144038,0,0,0,0,0.172684981865896,0,0,0,0,0,413.578319808552,358.433337598957,0,0,1.26203287766503,1.56175497718655,0,0,0,0,0,0,0,106.036034419196,0,0.712262414669021,0,0,266.817728063325,10.1967867185092,57.1391522663379,254.994067829974,909.234528179899,883.261180042904,625.913326053432,649.99830830578,570.039308037169,280.640641047005,220.324891921747,250.619370093094,1.70219802876894,32.7711191136985,14.6175312674513,6.00143698088458,1.06404140185364,1.96205699362278,3.1264313914403,6.08929898229199,0,0,4.41056796109924,0,0.322928853391811,1.62844897306021,0.835606408021955,0.328281799490123,115.426411305421,446.689552543318,0,5.57244543500701,2.03713980106683,0.565105371014073,0.136694227721025,0,0,0,0,2086.90997098104,0.949007980743406,14.4356821660063,11.6645768087545,11.2907679847813,39.7419866018043,110.049306650014,225.23066685154,700.458900749263,22.2937754061884,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.89606672376907,3.85177909051312,1.64337531463724,0.77952493786677,0.895133478337407,0.993406773906324,0.721172697119813,0.886137163047463,1.21159739937777,1.295515713135,0.806609481094724,2.33898913775406,1.44317762460494,1.05189211963412,0,0,0,0,0,0,0,0.857473516316263,0,849.386771296068,831.807702368469,759.0865553072,703.22322215037,949.52437240211,1031.86806383433,959.206972829396,1052.400651935,886.799694382088,899.867421824663,25.84304954846,46.6859101879206,39.2687293234509,39.3832881650636,30.3939085810574,36.5848581815528,50.0055137553634,46.9759930504679,62.579245870404,56.3514782233268,61.8489491732185,54.7016390019621,47.3826027797605,50.7719458570613,50.0262934603392,53.8211871149873,38.9371335174714,37.0385703290314,46.5657067907736,46.8092566027384,47.6588260815727,42.594193478241,38.626662771466,43.1678857398016,47.8075652509879,39.5996364933046,44.268569435211,46.3002692130603,43.0499040891382,46.5748085475923,41.2849863072126,35.4616136552028,42.150797446478,46.6359891969758,36.845162697398,141.642597690815,52.4006802917715,47.7013739987222,18.1723915465401,20.2944105589954,15.5351449865682
|short_description=p1@Sst
|short_description=p1@Sst
}}
}}

Latest revision as of 19:42, 1 October 2015

Short description:p1@Sst
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sst_5end
Coexpression cluster:MCL_coexpression_mm9:414
Association with transcript: 0bp_to_ENSMUST00000004480, NM_009215, uc007ytx.1_5end
EntrezGene:Sst
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sst

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7200.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8153.95
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3106.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1202.39
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2188.12
GP2+ M cell, pool1.CNhs13228.11845-124H921.25
GP2+ M cell, pool2.CNhs13231.11846-124I165.05
GP2+ M cell, pool3.CNhs13240.11847-124I244.82
Ileum epithelium, pool1.CNhs13199.10252-104B9188.12
Ileum epithelium, pool2.CNhs13232.10253-104C1120.22
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8162.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F635.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3323.91
Mouse Granule cells, donor2.CNhs12357.11731-123E3469.21
Mouse Granule cells, donor3.CNhs12108.11636-122C7384.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D554.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F570.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D959.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1591.30
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5694.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2252.58
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2223.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6242.67
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3448.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3223.84
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7309.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4125.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4126.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8105.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4469.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5351.73
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6495.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6546.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6506.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1222.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A755.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B674.33
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4182.66
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H7148.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4529.81
corpus striatum, adult.CNhs10487.19-21D8851.87
corpus striatum, neonate N00.CNhs11226.630-43F1411.39
cortex, adult.CNhs10473.12-14D51006.62
cortex, neonate N30.CNhs11107.1392-42F2767.15
diencephalon, adult.CNhs10482.20-12F2464.82
diencephalon, neonate N30.CNhs11201.1388-42B2499.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E226.90
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A812.06
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8982.26
hippocampus, neonate N00.CNhs11228.627-43G1122.15
intestinal mucosa, adult.CNhs10506.860-29I3267.97
intestine, adult.CNhs10496.178-9A376.43
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H439.73
intestine, embryo E17.CNhs10582.482-18D368.49
intestine, embryo E18.CNhs10526.1289-20F7122.32
intestine, neonate N00.CNhs11126.644-26D1118.16
intestine, neonate N01.CNhs11192.1322-23E9131.76
intestine, neonate N06.CNhs11102.688-20B871.63
intestine, neonate N07.CNhs11095.720-20F2103.46
intestine, neonate N10.CNhs11098.755-23A595.53
intestine, neonate N20.CNhs11187.827-18D1142.91
intestine, neonate N25.CNhs11121.1352-25E3106.56
intestine, neonate N30.CNhs11131.1384-42G1145.17
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2413.58
medulla oblongata, neonate N30.CNhs11200.1396-42A3358.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9106.04
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E4266.82
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F257.14
pancreas, embryo E16.CNhs11003.460-26E5254.99
pancreas, embryo E17.CNhs10599.1558-45G3909.23
pancreas, embryo E18.CNhs10580.1535-43I7883.26
pancreas, neonate N00.CNhs11105.645-26G9625.91
pancreas, neonate N01.CNhs11138.1531-43D7650.00
pancreas, neonate N02.CNhs11139.1539-43D8570.04
pancreas, neonate N16.CNhs11136.787-43B6280.64
pancreas, neonate N25.CNhs11094.1555-45E2220.32
pancreas, neonate N30.CNhs11182.1548-44H5250.62
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E632.77
pituitary gland, embryo E13.CNhs11009.370-44C714.62
pituitary gland, embryo E14.CNhs11037.398-44A56.00
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I1115.43
spinal cord, adult.CNhs10505.24-13C9446.69
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62086.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G814.44
stomach, embryo E16.CNhs11022.459-17D411.66
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C639.74
stomach, neonate N03.CNhs11193.1340-24B8110.05
stomach, neonate N07.CNhs11210.718-18A9225.23
stomach, neonate N25.CNhs11104.1355-25E4700.46
stomach, neonate N30.CNhs11134.1386-42I122.29
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1849.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2831.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3759.09
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7703.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4949.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51031.87
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6959.21
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71052.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8886.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9899.87
whole body, embryo E11.CNhs11014.324-5I825.84
whole body, embryo E12.CNhs10587.857-27C946.69
whole body, embryo E13.CNhs10512.372-23H239.27
whole body, embryo E14.5.CNhs10578.420-27D239.38
whole body, embryo E14.CNhs10519.395-14B130.39
whole body, embryo E16.CNhs10514.453-14F236.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G546.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G562.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G556.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G561.85
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G554.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G547.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G550.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G553.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G537.04
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.57
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G547.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G542.59
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G543.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G539.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G544.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G546.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G543.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G546.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.28
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.15
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G546.64
whole body, embryo E17.5.CNhs10513.490-9F936.85
whole body, embryo E17.CNhs10517.475-3I5141.64
whole body, embryo E18.CNhs10516.493-3B352.40
whole body, neonate N00.CNhs10525.657-19C247.70
whole body, neonate N01.CNhs10576.659-23C618.17
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B415.54





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.05e-1223
neuroblast (sensu Vertebrata)2.05e-1223

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.74e-1954
neural tube4.57e-1852
neural rod4.57e-1852
future spinal cord4.57e-1852
neural keel4.57e-1852
gray matter1.62e-1734
neurectoderm5.33e-1664
neural plate5.33e-1664
presumptive neural plate5.33e-1664
anterior neural tube5.22e-1540
brain8.18e-1547
future brain8.18e-1547
regional part of brain1.87e-1446
brain grey matter2.13e-1429
regional part of telencephalon2.13e-1429
telencephalon2.13e-1429
regional part of forebrain2.18e-1439
forebrain2.18e-1439
future forebrain2.18e-1439
pre-chordal neural plate9.22e-1449
central nervous system1.13e-1373
nervous system4.70e-1375
ecto-epithelium1.48e-1173
cerebral cortex2.64e-1021
cerebral hemisphere2.64e-1021
pallium2.64e-1021
ectoderm-derived structure7.11e-0995
ectoderm7.11e-0995
presumptive ectoderm7.11e-0995
regional part of cerebral cortex7.76e-0917
occipital lobe1.01e-0810
visual cortex1.01e-0810
neocortex1.01e-0810
intestine1.23e-0731
gastrointestinal system2.49e-0747
pancreas3.14e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:23890891..23890947,-&oldid=4318921"