FFCP PHASE1:Mm9::chr12:50483044..50483065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50483044..50483065,+ | |||
|description=CAGE_peak_at_chr12:50483044..50483065,+ | |description=CAGE_peak_at_chr12:50483044..50483065,+ | ||
|id=chr12:50483044..50483065,+ | |id=chr12:50483044..50483065,+ | ||
|ontology_enrichment_celltype=CL:0002609!9.94e-13!6;CL:0002608!4.65e-07!3 | |ontology_enrichment_celltype=CL:0002609!9.94e-13!6;CL:0002608!4.65e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.65e-53,6;CL:0002608,6.99e-27,3;CL:0000117,6.67e-14,23;CL:0000337,6.67e-14,23;CL:0000540,1.18e-09,33;CL:0000047,1.18e-09,33;CL:0000031,1.18e-09,33;CL:0000404,1.18e-09,33;CL:0000393,3.82e-08,39;CL:0000211,3.82e-08,39;CL:0002319,2.28e-07,43;CL:0000221,3.39e-07,44;CL:0000133,3.39e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!8.36e-22!29;UBERON:0003528!8.36e-22!29;UBERON:0001893!8.36e-22!29;UBERON:0000956!5.11e-18!21;UBERON:0001869!5.11e-18!21;UBERON:0000203!5.11e-18!21;UBERON:0002020!9.28e-18!34;UBERON:0002780!9.18e-15!39;UBERON:0001890!9.18e-15!39;UBERON:0006240!9.18e-15!39;UBERON:0003080!2.95e-14!40;UBERON:0002619!5.37e-14!17;UBERON:0002616!8.16e-12!49;UBERON:0000955!1.82e-11!50;UBERON:0006238!1.82e-11!50;UBERON:0001049!8.25e-11!52;UBERON:0005068!8.25e-11!52;UBERON:0006241!8.25e-11!52;UBERON:0007135!8.25e-11!52;UBERON:0003056!1.22e-10!49;UBERON:0000033!7.52e-10!63;UBERON:0001954!1.25e-09!7;UBERON:0003022!1.25e-09!7;UBERON:0002421!1.25e-09!7;UBERON:0000349!1.25e-09!7;UBERON:0002600!1.25e-09!7;UBERON:0000369!1.50e-08!5;UBERON:0002435!1.50e-08!5;UBERON:0000204!1.50e-08!5;UBERON:0010082!1.50e-08!5;UBERON:0001017!9.39e-08!73;UBERON:0005743!9.39e-08!73;UBERON:0000073!2.14e-07!75;UBERON:0001016!2.14e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.62e-20,21;UBERON:0001869,1.62e-20,21;UBERON:0000203,1.62e-20,21;UBERON:0001954,2.26e-20,7;UBERON:0003022,2.26e-20,7;UBERON:0002421,2.26e-20,7;UBERON:0000349,2.26e-20,7;UBERON:0002600,2.26e-20,7;UBERON:0003528,3.26e-19,29;UBERON:0002791,3.26e-19,29;UBERON:0001893,3.26e-19,29;UBERON:0002020,2.41e-16,34;UBERON:0002780,3.32e-14,39;UBERON:0001890,3.32e-14,39;UBERON:0006240,3.32e-14,39;UBERON:0003080,7.68e-14,40;UBERON:0002616,5.50e-12,46;UBERON:0000955,1.01e-11,47;UBERON:0006238,1.01e-11,47;UBERON:0003056,3.16e-11,49;UBERON:0001049,1.48e-10,52;UBERON:0005068,1.48e-10,52;UBERON:0006241,1.48e-10,52;UBERON:0007135,1.48e-10,52;UBERON:0000073,3.79e-10,54;UBERON:0002619,1.32e-08,17;UBERON:0002346,1.73e-08,64;UBERON:0003075,1.73e-08,64;UBERON:0007284,1.73e-08,64;UBERON:0010371,2.22e-07,73;UBERON:0001017,2.22e-07,73;UBERON:0001016,3.61e-07,75 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50254820929517,8.91039192989158,10.0955981448663,0,0,5.51208596467293,5.271500906003,3.67687514644008,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,4.14659361972453,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,5.24813523134351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,1.01391719956096,0.754505365544305,0.280924522409647,0,0.402048282689293,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,0.365855945745545,0,0.135804113845862,0,0.474540072496697,0.394017929502254,0,0.309873682371932,0.385813221962283,1.74867404556562,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50254820929517,8.91039192989158,10.0955981448663,0,0,5.51208596467293,5.271500906003,3.67687514644008,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,4.14659361972453,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,5.24813523134351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,1.01391719956096,0.754505365544305,0.280924522409647,0,0.402048282689293,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,0.365855945745545,0,0.135804113845862,0,0.474540072496697,0.394017929502254,0,0.309873682371932,0.385813221962283,1.74867404556562,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:50483044..50483065,+ | |short_description=p@chr12:50483044..50483065,+ | ||
}} | }} |
Latest revision as of 01:58, 5 August 2015
Short description: | p@chr12:50483044..50483065, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:50483044..50483065, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.65e-53 | 6 |
hippocampal neuron | 6.99e-27 | 3 |
CNS neuron (sensu Vertebrata) | 6.67e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.67e-14 | 23 |
neuron | 1.18e-09 | 33 |
neuronal stem cell | 1.18e-09 | 33 |
neuroblast | 1.18e-09 | 33 |
electrically signaling cell | 1.18e-09 | 33 |
electrically responsive cell | 3.82e-08 | 39 |
electrically active cell | 3.82e-08 | 39 |
neural cell | 2.28e-07 | 43 |
ectodermal cell | 3.39e-07 | 44 |
neurectodermal cell | 3.39e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.62e-20 | 21 |
cerebral hemisphere | 1.62e-20 | 21 |
pallium | 1.62e-20 | 21 |
Ammon's horn | 2.26e-20 | 7 |
lobe parts of cerebral cortex | 2.26e-20 | 7 |
hippocampal formation | 2.26e-20 | 7 |
limbic system | 2.26e-20 | 7 |
limbic lobe | 2.26e-20 | 7 |
brain grey matter | 3.26e-19 | 29 |
regional part of telencephalon | 3.26e-19 | 29 |
telencephalon | 3.26e-19 | 29 |
gray matter | 2.41e-16 | 34 |
regional part of forebrain | 3.32e-14 | 39 |
forebrain | 3.32e-14 | 39 |
future forebrain | 3.32e-14 | 39 |
anterior neural tube | 7.68e-14 | 40 |
regional part of brain | 5.50e-12 | 46 |
brain | 1.01e-11 | 47 |
future brain | 1.01e-11 | 47 |
pre-chordal neural plate | 3.16e-11 | 49 |
neural tube | 1.48e-10 | 52 |
neural rod | 1.48e-10 | 52 |
future spinal cord | 1.48e-10 | 52 |
neural keel | 1.48e-10 | 52 |
regional part of nervous system | 3.79e-10 | 54 |
regional part of cerebral cortex | 1.32e-08 | 17 |
neurectoderm | 1.73e-08 | 64 |
neural plate | 1.73e-08 | 64 |
presumptive neural plate | 1.73e-08 | 64 |
ecto-epithelium | 2.22e-07 | 73 |
central nervous system | 2.22e-07 | 73 |
nervous system | 3.61e-07 | 75 |